MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-143D07
Chromosome	9 (Build37)
Map Location	29,541,443 - 29,542,563
singlet/doublet	singlet
Overlap gene	Hnt
Upstream gene	Opcml, LOC625222
Downstream gene	Snx19, LOC666478
Link	Open Mouse BAC browser

Click to get alignment info.

name	Opcml (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330908 MGI:97397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hnt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235106 MGI:2446259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625222 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Snx19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102607 MGI:1921581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666478 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Opcml (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130550 GeneID:330908 MGI:97397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opioid binding protein/cell adhesion molecule-like transcript_id : NM_177906.4

name	Hnt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130034 GeneID:235106 MGI:2446259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurotrimin transcript_id : NM_172290.3

name	LOC625222 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259886 GeneID:625222
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC625222 transcript_id : XM_001477616.1

name	Snx19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130542 GeneID:102607 MGI:1921581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 19 transcript_id : NM_028874.2

name	Opcml (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51092272 CCDS:CCDS22942.1 GeneID:330908 MGI:97397
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : opioid binding cell adhesion molecule product : opioid binding protein/cell adhesion molecule-like protein_id : NP_808574.2

name	Hnt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982044 CCDS:CCDS22943.1 GeneID:235106 MGI:2446259
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : neurotrimin protein_id : NP_758494.2

name	LOC625222 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259887 GeneID:625222
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477666.1

name	Snx19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930455 CCDS:CCDS22944.1 GeneID:102607 MGI:1921581
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : sorting nexin 19 protein_id : NP_083150.1

name	LOC666478 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666478
definition	number : 1 pseudo : _no_value

clone name	MSMg01-139H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127A01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-529A07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-383C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286H01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-143D07.b	B6Ng01-143D07.g
ACC	DH941204	DH941205
length	1,099	1,031
definition	DH941204\|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D07, 5' end.	DH941205\|Mus musculus domesticus DNA, BAC clone: B6Ng01-143D07, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcctcgaggccttatttaaaagtagggcaactttctagagttctgc cttctctgctggctatggtgccaggtgggaagattcgagcgcattcctct tccccagaatagaaaggtttggaaatgctcaatcgaacagattgattaat aattccttcaccacatgcttctctctctgttgcatttcggattctctctc tgctctgtttagggttaactttgtctgaccaaaacaagattgtagcgtag agttcaagtataattggtttgcatttgtgcagagtcatgggtggccacga tttcgtcacatgtgacactcaggtccctggctggagagcctagaacactc accccattggcagatggcagaacagctgttatctctttttaagtatatca actcgggagttccaggcctcctctgcacatagcaccttgattagaatatg ctaggtagtcctgtttgccatcagttgggaggaggaagaagggggcatgc agtaagcttgcaaatatttcagccatattagtcttccccgtcggtacctt tgacacgttgctaacatctgctgtagagttaagcattggttgcttgttat ttatgtgtccattcattacccagaagagtgattgtacacccatcctgggc agtgctgcttctacacagggctcagacagtgatcaggagagaacttgtcc catttggggagctcccacagtgacacaatgacatgctgagccaggtgtgc acaacaccccggggggacaggaagagttcacgtgcttattacatgtctag gaaggcttctggagaaggcaagtttaggcttatgtaagaaataaagaatg agtcagcattatccaggcaaagaaagtcgtttgcaaagatgagggtatcg aggaaaagagtctttccaatcagacctgtagctgtagtacaaaagtaaac ccagagtcctgcctcctgtcagtacatttccaaatgctcccttttgatta gactgtcagacaagagaacaagccctgttttataaatagagatgtctaac tagccctcttctcctccctctagatgttacaaacctctctaaacctgtt	gaattcataacgtatttgcacatacatacatacatacttctaaatttaac ctgttgggtcatataacattacttgtctgtatgttttcagagaggaactt ttagcagcagaaaaccagttggtgcgctcttcctgtggaagaccagcttt tccaatccaagccttctcagttgcctgttactctttgtgtagtgctggca ccagatggactatttccaatccagtttggcatgtttgttggtgttatact tgttcagtccatgatttgggtggccatgttgattagactttgcaggtagc ttgtgatgtgaccagggaacaaaatctcacagctaactctatgatccttt ggatcttcagatcatttacctcctcttctacaatgttctctgagctttag gtgtgggagtgtgttgttagatgtatctgttgcaattggtctctacaact ctgccttttgattggttgtggttttctatagtaatctccatctattgcag agagaagtttccttaatgtgggatgaaaattacatttatctctgagcata agggcacatgcttatagattgctgttaggaactatactggttttgtaaat cagtggctgtagaatctcccccattaagtgtgatttcactcgcactggct cattagttaacttcccgacaccaggtacgctctgcctcttgttgcacaaa tcaaatcctaacaaattcagaaggattgaaatatatttttcttctatatg ataaataaggaataaatccataaatcaaaaagattttgatttattgcaga aagtatataaactcatagaaattgaactacccactactgaatgctgaaga aatcagaaattgaaacttactttgattgaatgaaagtgaatacagaatat accagacctttatagatatatgagagtgggttttttgacagctattacat ctctgatttaaaaatcagagaagcttcaattaatacttaatattgcatcc tcaagtcctagaaaagaggacaaggggaacc
quality values	Open. Hide. 57 61 24 40 61 61 61 53 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 12 20 20 21 13 8 8 10 12 34 44 43 55 61 61 49 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 45 32 28 26 26 14 26 30 28 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 53 61 53 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 52 61 61 61 61 61 61 61 61 61 47 42 47 61 61 61 61 47 61 61 61 61 61 53 57 57 57 53 53 57 57 53 57 57 57 57 57 53 50 57 53 53 53 53 57 57 53 42 47 57 53 45 57 53 57 57 57 53 57 57 53 57 53 57 47 57 57 57 57 57 57 50 35 53 57 53 57 57 57 57 52 40 57 52 53 47 47 57 53 53 53 53 52 57 57 57 57 53 57 57 45 57 33 57 50 45 46 45 57 39 52 47 52 57 57 47 45 57 52 47 57 57 53 42 52 52 53 57 52 50 52 52 41 57 45 52 52 32 57 53 50 36 52 38 38 52 41 46 45 30 57 46 34 57 34 50 53 29 23 53 41 34 30 53 37 53 38 38 30 53 39 50 50 34 16 24 37 42 44 38 53 40 53 47 36 38 47 40 42 42 43 24 52 33 27 57 57 30 53 35 40 36 53 35 33 52 48 53 33 40 35 37 20 57 52 34 53 32 40 37 31 42 40 53 37 36 53 37 33 53 33 40 37 57 57 37 47 24 33 40 28 47 35 29 47 40 37 34 53 33 36 22 41 29 30 39 44 27 32 20 29 53 37 39 34 48 29 28 45 29 29 48 28 46 32 32 27 22 40 29 29 29 29 28 51 51 47 24 45 44 45 45 31 29 25 27 25 31 25 30 21 29 14 27 24 34 27 29 35 32 30 29 25 32 21 23 27 23 32 16 30 47 28 31 29 29 22 36 29 21 8 12 11 46 25 29 28 27 26 32 17 24 23 10 13 8 29 31 25 34 51 30 18 16 10 7 34 25 10 8 22 28 23 29 18 32 51 28 34 30 46 31 14 25 26 22 29 28 19 30 33 35 16 29 18 28 32 14 29 28 31 20 19 28 27 28 51 33 21 31 51 31 17 20 36 22 31 51 26 28 18 21 46 19 14 22 20 19 23 11 44 29 20 19 27 31 23 28 23 18 18 44 51 9 6 8 8 7 22 14 31 31 11 34 22 22 25 31 23 12 31 20 19 24 32 14 28 15 23 29 27 13 28 23 26 23 24 23 51 44 23 22 35 19 51 22 14 38 23 25 38 28 9 31 26 24 26 29 22 34 23 10 38 19 32 6 17 31 13 33 21 12 7 24 44 18 19 19 13 44 27 20 44 9 12 11 38 28 12 44 44 13 30 7 14 27 11 14 13 15 13 28 6 18 23 13 34 15 17 31 13 26 18 22 29 14 8 8 22 7 33 19 11 16 8 42 37 21 6 7 8 34 22 10 16 11 25 11 30 9 29 5 12 17 17 13 11 29 26 11 10 6 4 5 21 9 17 6 4 4 6 4 3 31 10 5 3 4 10 7 3 1 2 4 6 3 10 5 5 7 6 8 8 5 21 5 6 9 31 14 10 23 9 9 16 6	Open. Hide. 55 47 43 47 12 14 11 12 11 13 8 9 11 12 26 55 55 47 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 49 59 59 37 44 30 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 44 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 37 61 61 43 47 61 61 45 61 61 61 61 61 61 53 61 61 61 61 61 50 61 61 61 61 61 61 42 47 61 61 61 53 61 61 61 53 61 45 61 61 61 50 61 57 47 57 53 53 53 47 47 42 53 53 53 53 50 57 57 57 42 33 53 57 57 57 43 45 53 52 53 45 47 57 57 50 53 53 57 53 57 57 57 30 52 35 52 38 53 43 57 47 47 50 52 52 53 57 53 53 53 38 50 43 42 36 38 57 47 43 57 53 52 53 53 36 47 47 47 38 53 52 53 45 52 53 57 38 37 52 52 41 37 38 36 53 47 46 53 32 40 41 57 53 37 53 52 38 53 38 57 45 32 53 50 50 46 41 41 32 30 41 42 33 53 42 42 38 33 39 50 32 36 30 38 30 50 50 57 30 38 30 45 30 57 52 35 43 45 31 38 41 53 24 53 37 30 38 33 47 23 24 57 52 30 52 31 25 42 52 19 29 39 27 34 38 38 48 42 40 40 40 36 53 40 39 27 28 57 30 42 41 37 33 37 33 44 33 40 48 48 57 46 37 32 37 37 37 33 39 39 57 30 22 52 34 36 16 40 48 23 37 23 10 53 44 34 57 33 30 28 33 24 34 53 53 47 44 37 15 30 26 19 16 37 24 28 27 36 25 35 57 44 24 25 18 15 27 28 28 23 30 53 23 29 29 38 31 48 34 57 35 34 35 33 48 46 47 30 14 32 21 51 51 33 25 36 28 48 34 18 15 27 17 15 35 28 46 51 41 28 18 18 29 35 34 33 51 24 30 27 26 20 30 30 25 39 46 28 28 37 34 31 31 28 30 24 28 37 44 23 33 34 28 28 17 30 18 24 10 29 22 17 23 31 48 16 29 51 16 27 28 19 16 51 51 48 15 30 29 34 46 25 12 18 25 12 19 27 36 28 29 22 12 14 23 33 17 28 28 32 43 29 28 29 34 28 24 14 10 14 7 14 29 26 18 19 28 19 31 26 16 16 34 27 20 23 46 29 7 7 39 9 29 15 10 7 10 27 35 16 10 21 9 11 26 27 29 28 11 14 7 5 7 8 7 7 12 17 22 23 15 6 21 6 12 9 29 16 15 16 19 16 29 15 29 24 26 32 36 36 12 20 11 7 4 11 9 6 32 19 46 12 7 7 24 22 8 17 29 36 30 36 12 16 31 34 28 10 25 8 8 16 15 13 10 9 9 12 14 9 5 17 8 13 23 13 16 11 31 36 29 23 7 11 11 8 16 7 13 6 32 38 22 23 32 11 6 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_29541443_29542563
seq2: B6Ng01-143D07.b_48_1146 (reverse)

seq1  AACAGGTTTAGA-AGAGTTGTATACACTCTTAGAGGGAAGGGAAGGAAGA  49
      |||||||||||| ||  ||||| ||| || ||||||||  |||  |||||
seq2  AACAGGTTTAGAGAGGTTTGTA-ACA-TC-TAGAGGGA--GGA--GAAGA  43

seq1  GAGCTAGTTTAAGACCATCTCTATTTATAAAAACAGGGCCTTGTTCTCTT  99
      | |||||||  ||| ||||||||||||| ||||||||| ||||||||| |
seq2  GGGCTAGTT--AGA-CATCTCTATTTAT-AAAACAGGG-CTTGTTCTC-T  87

seq1  TGTCTGACCAGTCCTAATCCAAAAGGGAGCCATTTGGAAATGTAACTGAC  149
      ||||||| |||| ||||| |||||||||| ||||||||||||| ||||| 
seq2  TGTCTGA-CAGT-CTAAT-CAAAAGGGAG-CATTTGGAAATGT-ACTGA-  131

seq1  CAGGAGGCAGGACTCCTGGGTTTACTTTTGTACTACAGCTACAGGTCTGA  199
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCAGGACT-CTGGGTTTACTTTTGTACTACAGCTACAGGTCTGA  180

seq1  TTGGAAAGACCTCCTTTTCCTCGATACCCTCATCTTTGCAAACGACTTTC  249
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAGAC--TCTTTTCCTCGATACCCTCATCTTTGCAAACGACTTTC  228

seq1  TTTGCCTGGATAATGCTGACTCATTCTTTATTTCTTACATAAGCCTAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGGATAATGCTGACTCATTCTTTATTTCTTACATAAGCCTAAAC  278

seq1  TTGCCTTCTCCAGAAAGCCTTCCTAGACATGTAATAAGCACGTGAACTCT  349
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCTCCAG-AAGCCTTCCTAGACATGTAATAAGCACGTGAACTCT  327

seq1  TCCTGTCCCCCCGGGGTGTTGTGCACACCTGGCTCAGCATGTCATTGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCCCCCGGGGTGTTGTGCACACCTGGCTCAGCATGTCATTGTGT  377

seq1  CACTGTGGGAGCTCCCCAAATGGGACAAGTTCTCTCCTGATCACTGTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGGAGCTCCCCAAATGGGACAAGTTCTCTCCTGATCACTGTCTG  427

seq1  AGCCCTGTGTAGAAGCAGCACTGCCCAGGATGGGTGTACAATCACTCTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGTGTAGAAGCAGCACTGCCCAGGATGGGTGTACAATCACTCTTC  477

seq1  TGGGTAATGAATGGACACATAAATAACAAGCAACCAATGCTTAACTCTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAATGAATGGACACATAAATAACAAGCAACCAATGCTTAACTCTAC  527

seq1  AGCAGATGTTAGCAACGTGTCAAAGGTACCGACGGGGAAGACTAATATGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGTTAGCAACGTGTCAAAGGTACCGACGGGGAAGACTAATATGG  577

seq1  CTGAAATATTTGCAAGCTTACTGCATGCCCCCTTCTTCCTCCTCCCAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATATTTGCAAGCTTACTGCATGCCCCCTTCTTCCTCCTCCCAACT  627

seq1  GATGGCAAACAGGACTACCTAGCATATTCTAATCAAGGTGCTATGTGCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAAACAGGACTACCTAGCATATTCTAATCAAGGTGCTATGTGCAG  677

seq1  AGGAGGCCTGGAACTCCCGAGTTGATATACTTAAAAAGAGATAACAGCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCCTGGAACTCCCGAGTTGATATACTTAAAAAGAGATAACAGCTG  727

seq1  TTCTGCCATCTGCCAATGGGGTGAGTGTTCTAGGCTCTCCAGCCAGGGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCATCTGCCAATGGGGTGAGTGTTCTAGGCTCTCCAGCCAGGGAC  777

seq1  CTGAGTGTCACATGTGACGAAATCGTGGCCACCCATGACTCTGCACAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGTCACATGTGACGAAATCGTGGCCACCCATGACTCTGCACAAAT  827

seq1  GCAAACCAATTATACTTGAACTCTACGCTACAATCTTGTTTTGGTCAGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCAATTATACTTGAACTCTACGCTACAATCTTGTTTTGGTCAGAC  877

seq1  AAAGTTAACCCTAAACAGAGCAGAGAGAGAATCCGAAATGCAACAGAGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAACCCTAAACAGAGCAGAGAGAGAATCCGAAATGCAACAGAGAG  927

seq1  AGAAGCATGTGGTGAAGGAATTATTAATCAATCTGTTCGATTGAGCATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCATGTGGTGAAGGAATTATTAATCAATCTGTTCGATTGAGCATTT  977

seq1  CCAAACCTTTCTATTCTGGGGAAGAGGAATGCGCTCGAATCTTCCCACCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCTTTCTATTCTGGGGAAGAGGAATGCGCTCGAATCTTCCCACCT  1027

seq1  GGCACCATAGCCAGCAGAGAAGGCAGAACTCTAGAAAGTTGCCCTACTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCATAGCCAGCAGAGAAGGCAGAACTCTAGAAAGTTGCCCTACTTT  1077

seq1  TAAATAAGGCCTCGAGGAATTC  1121
      ||||||||||||||||||||||
seq2  TAAATAAGGCCTCGAGGAATTC  1099

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information