BAC Information

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BAC

Clone NameB6Ng01-148D15
Chromosome9 (Build37)
Map Location 91,432,169 - 91,433,325
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039925, EG434428, LOC621576, Zic1, Zic4
Downstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148D15.bB6Ng01-148D15.g
ACCDH944896DH944897
length1,1681,121
definitionDH944896|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D15, 5' end.DH944897|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgtggatgtggaaaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagttgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcacctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacactcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaagagctaaaggatctgcaaccctat
aggtgacacattatgaactaaccagtaccccgagctcttgactctagctg
catattatcaaagatggcctagtcgcatcactgaaagagagcccattgac
ctgctaccttatggccagtacaggtaacccaaggcccaaaagggggagtg
gtggcagggaatgggcgg
gaattcattaaagatagttttaaaactgataagtgcttttgtataggttt
ttgagagcacatttagaacacaaaactcaatacatttaagcataagaaaa
attaaaatatatagtttaaaaaattcttctctgacctgagaagcctggaa
ataagtaaatgtgataaaacatgttattgatctatatgctgtgaattagg
ataaaaatgatctaagcaaataccaatatatattgttgatgaactgaaaa
acttaaataataatgccactgctctccatgtttgcttatagatttaatgc
atattaatatgacttaaaatagagataaggggattctaaaatgtatacat
ccaaagaaactagaatacctgaaatatctttgaaaaacaaagttaaaatt
tgaaatattacactgtcctactttgagacttattgtaccggtacaatgtt
aaaaatattgaggtactggtggagaactggacatggattaatgatgcaga
atacagtcttgtcagaggccttaaaaataaccagcatatttgtgacaaag
gaacttatgccaatccatcaatttcaacaaaagctattgaaacaactggg
aatccacatgcataaatctcaatctgaagtgctcatcaatgcaaaaaaaa
aaagtcaaagtgattataaatataaatgtaaagggaaaaattatagcaga
ttgaaaaatcatagaagaaaagtcttcacacactgactgtataaagaata
ctatgccattactgaaacatgctacagatataaaaaaaaatgcacatcag
ttaaatgtaatagcaagttgaacaaagtattgtatttattttttaaaagt
ataaggcaatgacactactatgctatgatgtgctgatagatgggagcctg
gcatggctgtcctctgagagaccctaccacagcggacttagatgcagata
cttacactgactgaaataggaccctgtgtgattaggggagtatagagagc
tgaaggagaggactctaagagacagcagttctcactgatcagatccagag
ctcttgaactgagccacccacaggagagcacaccacggctgcttgagtcc
tgcacatgtagcaaggtctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_91432169_91433325
seq2: B6Ng01-148D15.g_69_1189

seq1  GAATTCATTAAAGATAGTTTTAAAACTGATAAGTGCTTTTGTATAGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAAGATAGTTTTAAAACTGATAAGTGCTTTTGTATAGGTTT  50

seq1  TTGAGAGCACATTTAGAACACAAAACTCAATACATTTAAGCATAAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGCACATTTAGAACACAAAACTCAATACATTTAAGCATAAGAAAA  100

seq1  ATTAAAATATATAGTTTAAAAAATTCTTCTCTGACCTGAGAAGCCTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATATATAGTTTAAAAAATTCTTCTCTGACCTGAGAAGCCTGGAA  150

seq1  ATAAGTAAATGTGATAAAACATGTTATTGATCTATATGCTGTGAATTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAATGTGATAAAACATGTTATTGATCTATATGCTGTGAATTAGG  200

seq1  ATAAAAATGATCTAAGCAAATACCAATATATATTGTTGATGAACTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGATCTAAGCAAATACCAATATATATTGTTGATGAACTGAAAA  250

seq1  ACTTAAATAATAATGCCACTGCTCTCCATGTTTGCTTATAGATTTAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATAATAATGCCACTGCTCTCCATGTTTGCTTATAGATTTAATGC  300

seq1  ATATTAATATGACTTAAAATAGAGATAAGGGGATTCTAAAATGTATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATATGACTTAAAATAGAGATAAGGGGATTCTAAAATGTATACAT  350

seq1  CCAAAGAAACTAGAATACCTGAAATATCTTTGAAAAACAAAGTTAAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAACTAGAATACCTGAAATATCTTTGAAAAACAAAGTTAAAATT  400

seq1  TGAAATATTACACTGTCCTACTTTGAGACTTATTGTACCGGTACAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTACACTGTCCTACTTTGAGACTTATTGTACCGGTACAATGTT  450

seq1  AAAAATATTGAGGTACTGGTGGAGAACTGGACATGGATTAATGATGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTGAGGTACTGGTGGAGAACTGGACATGGATTAATGATGCAGA  500

seq1  ATACAGTCTTGTCAGAGGCCTTAAAAATAACCAGCATATTTGTGACAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTCTTGTCAGAGGCCTTAAAAATAACCAGCATATTTGTGACAAAG  550

seq1  GAACTTATGCCAATCCATCAATTTCAACAAAAGCTATTGAAACAACTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTATGCCAATCCATCAATTTCAACAAAAGCTATTGAAACAACTGGG  600

seq1  AATCCACATGCATAAATCTCAATCTGAAGTGCTCATCAATGCAAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACATGCATAAATCTCAATCTGAAGTGCTCATCAATGCAAAAAAAA  650

seq1  AAAGTCAAAGTGATTATAAATATAAATGTAAAGGGAAAAATTATAGCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAAGTGATTATAAATATAAATGTAAAGGGAAAAATTATAGCAGA  700

seq1  TTGAAAAATCATAGAAGAAAAGTCTTCACACACTGACTGTATAAAGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAATCATAGAAGAAAAGTCTTCACACACTGACTGTATAAAGAATA  750

seq1  CTATGCCATTACTGAAACATGCTACAGATATAAAAAAAAATGCACATCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCATTACTGAAACATGCTACAGATATAAAAAAAAATGCACATCAG  800

seq1  TTAAATGTAATAGCAAGTTGAACAAAGTAATTGTAATTTAATTTTTAAAA  850
      |||||||||||||||||||||||||||| ||||| ||||| |||||||||
seq2  TTAAATGTAATAGCAAGTTGAACAAAGT-ATTGT-ATTTATTTTTTAAAA  848

seq1  GTATAAGGCAATGACACTACTATGCTATGATGTGCTGATAGATGGGAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGGCAATGACACTACTATGCTATGATGTGCTGATAGATGGGAGCC  898

seq1  TGGCATGGCTGTCCTCTGAGAGACCCTACCAACAGCGGACTTAGATGCAG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGGCATGGCTGTCCTCTGAGAGACCCTACC-ACAGCGGACTTAGATGCAG  947

seq1  ATAACTTACACTGGACTGAAATTAGGGACCCCTGTGGTTGAATTAGGGGA  1000
      || ||||||||| |||||||| ||||   |||||||  || |||||||| 
seq2  AT-ACTTACACT-GACTGAAA-TAGG--ACCCTGTG--TG-ATTAGGGG-  988

seq1  AGTATAGAAGAAGCTGAAAGGGAGAGGACTTCATAGGAAGACCAGCAG-T  1049
      ||||||||   |||||||  ||||||||||   || | ||| |||||| |
seq2  AGTATAGA--GAGCTGAA--GGAGAGGACT--CTAAG-AGA-CAGCAGTT  1030

seq1  CTCAACTGATCCAGATCCCAGGGAGCTCCCAGAGACTGAGCCACCCACCA  1099
      ||| |||||| |||||||    ||||| |  || ||||||||||||| ||
seq2  CTC-ACTGAT-CAGATCC---AGAGCT-CTTGA-ACTGAGCCACCCA-CA  1072

seq1  GGAGGAGCACACACACGGCTGCTCTGAGGCCCCTGGCACATATGTAGCAG  1149
      ||| |||||||| |||||||||| ||||   ||||   || |||||||| 
seq2  GGA-GAGCACAC-CACGGCTGCT-TGAG--TCCTG---CACATGTAGCA-  1113

seq1  AGGTCTAC  1157
      ||||||||
seq2  AGGTCTAC  1121