BAC Information

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BAC

Clone NameB6Ng01-149D12
Chromosome9 (Build37)
Map Location 46,315,853 - 46,425,192
singlet/doubletdoublet
Overlap genenone
Upstream geneDscaml1, Cep164, LOC640094, Bace1, Rnf214, Pcsk7, Tagln, Sidt2, Pafah1b2, 2610005M20Rik, BC033915, Apoa1, Apoc3, Apoa4, Apoa5, Zfp259, Bud13, 4931429L15Rik, LOC100042722
Downstream geneEG667890, 2900052N01Rik, D930036J05, Cadm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149D12.bB6Ng01-149D12.g
ACCDH945617DH945618
length1,204141
definitionDH945617|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D12, 5' end.DH945618|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,423,987 - 46,425,192)(46,315,853 - 46,315,993)
sequence
gaattcacttctccagctgagagcatctatcacctaccctgtgacaccag
cactcatgactctctcggatctttaggctcaaactgacttagccatccac
cttcctgctcctccagcatgcagatggcagttcatgaaacttcctggtgt
tcctaaccacatgatcttcctgtttcacacatacatgtgaactgtttatt
ctgttctcttgactaatacggagctcaataaaggacacatgctcaggcca
aagagagttgaaagttcaaggccagcccaagacacacagtaagacaaacc
aaatacatgctcacacatgcacatttgtgcacacacccacacacccaggg
acatacacacaaaacttcacacactcagtgaatcagtaagaacagcaata
cagcaatgtcatccagggtcctacctgacaacggtaaatagatgttacac
cattgacctcatttctctagactgactacataatgcttagaacccaagga
aaaagtctacgttaagaggttcacacagtgatggacaaatgacagatgct
caagcagtactagacccctcccactgcctagttcacaaaactctttacat
cttccccacaacaaccccttgaggtaataagcattttctaattgcatgtc
ccattctagttgtagataaactgaggactgaggagtttgtattactgcaa
tccaaccagagaatcccagattcaaccgtctaacagcacctgacttcaaa
acccaggggtgcctagacagtccacagcacgaaggcagtgcctagatatg
tggtacctgtcaggccgatatcaacacctgaggagagagagagtcatgga
tttgaggatttggggaggctgccagctggacagaaacagcctcgtttgga
accacacccctgcattagcaatgatatagggggtacaacagtcaagtgag
cccactgttctgtataaagaagagccaacttgctttgccctagtcgggat
gctaaggaactccaactacagtctcatggcggtggtaatgagtaggtggg
cagagttctcctgacctagggctccactagaacaggagaaacaggacttg
ccaggatttcctgattcctcgtcctagtcaccaccctggttccgaatctg
aggcaacttgttaagacacacatcacaagacagaaatgtggagaaaagtg
agaa
caagacattggatgcctgggaaatcagcccctggcctttttttttttttt
tttttttctaaatgtggtgaaatgtgcttggtcttaagggattttctggt
gtcagcaactccctaaactaagctcttctccccccttctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_46423987_46425192
seq2: B6Ng01-149D12.b_46_1249 (reverse)

seq1  TTCTCACTTTTCTCTCTCTATTCCTGTCTTGTGATG-GTGTCTT-ACAGT  48
      |||||||||||||| | | ||| ||||||||||||| ||||||| |||  
seq2  TTCTCACTTTTCTC-CAC-ATTTCTGTCTTGTGATGTGTGTCTTAACAAG  48

seq1  GGGCTTCAGATCTGGAA-CAGGGTGGGTGAACTGAGACGAGGGATCAGGA  97
        || ||||||  |||| |||||| |||| |||  ||||||| |||||| 
seq2  TTGCCTCAGATTCGGAACCAGGGT-GGTG-ACTAGGACGAGGAATCAGG-  95

seq1  AAATCCTGGCAAGTCTTGTTTCT-CTGTTCTAGTGGAAGGCCTAGGCCAG  146
      ||||||||||||||| ||||||| |||||||||||| || |||||| |||
seq2  AAATCCTGGCAAGTCCTGTTTCTCCTGTTCTAGTGG-AGCCCTAGGTCAG  144

seq1  GAAGAACTCTGCCCACCTACTCCATTACCACCGCCATGGAGACTGTAGAT  196
      | ||||||||||||||||||| ||||||||||||||| |||||||||| |
seq2  G-AGAACTCTGCCCACCTACT-CATTACCACCGCCAT-GAGACTGTAGTT  191

seq1  GGAGTTCCTTAGCATCCCGACTAGGGCAAAGCAAGTTGGCTCTTC-TTAT  245
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGAGTTCCTTAGCATCCCGACTAGGGCAAAGCAAGTTGGCTCTTCTTTAT  241

seq1  ACAGGACAGTGGGCTCACCTGACTGTTGTACCCCCTATATCCTTGCTAAT  295
      |||| ||||||||||||| |||||||||||||||||||||| ||||||||
seq2  ACAGAACAGTGGGCTCACTTGACTGTTGTACCCCCTATATCATTGCTAAT  291

seq1  GCA-GGGTGTGGTTCCAAACGAGGCTGTTTCTGTCCAGCTGGCAGCCTCC  344
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGTGTGGTTCCAAACGAGGCTGTTTCTGTCCAGCTGGCAGCCTCC  341

seq1  CCAAATCCTCAAATCCATGACTCTCTCTCTCCTCAGGTGTTGATATCGGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCCTCAAATCCATGACTCTCTCTCTCCTCAGGTGTTGATATCGGC  391

seq1  CTGACAGGTACCACATATCTAGGCACTGCCTTCGTGCTGTGGACTGTCTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGGTACCACATATCTAGGCACTGCCTTCGTGCTGTGGACTGTCTA  441

seq1  GGCA-CCCTGGGTTTTGAAGTCAGGTGCTGTTAGACGGTTGAATCTGGGA  493
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCCTGGGTTTTGAAGTCAGGTGCTGTTAGACGGTTGAATCTGGGA  491

seq1  TTCTCTGGTTGGATTGCAGTAATACAAACTCCTCAGTCCTCAGTTTATCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGTTGGATTGCAGTAATACAAACTCCTCAGTCCTCAGTTTATCT  541

seq1  ACAACTAGAATGGGACATGCAATTAGAAAATGCTTATTACCTCAAGGGGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAGAATGGGACATGCAATTAGAAAATGCTTATTACCTCAAGGGGT  591

seq1  TGTTGTGGGGAAGATGTAAAGAGTTTTGTGAACTAGGCAGTGGGAGGGGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGGGAAGATGTAAAGAGTTTTGTGAACTAGGCAGTGGGAGGGGT  641

seq1  CTAGTACTGCTTGAGCATCTGTCATTTGTCCATCACTGTGTGAACCTCTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTACTGCTTGAGCATCTGTCATTTGTCCATCACTGTGTGAACCTCTT  691

seq1  AACGTAGACTTTTTCCTTGGGTTCTAAGCATTATGTAGTCAGTCTAGAGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTAGACTTTTTCCTTGGGTTCTAAGCATTATGTAGTCAGTCTAGAGA  741

seq1  AATGAGGTCAATGGTGTAACATCTATTTACCGTTGTCAGGTAGGACCCTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGTCAATGGTGTAACATCTATTTACCGTTGTCAGGTAGGACCCTG  791

seq1  GATGACATTGCTGTATTGCTGTTCTTACTGATTCACTGAGTGTGTGAAGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACATTGCTGTATTGCTGTTCTTACTGATTCACTGAGTGTGTGAAGT  841

seq1  TTTGTGTGTATGTCCCTGGGTGTGTGGGTGTGTGCACAAATGTGCATGTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGTATGTCCCTGGGTGTGTGGGTGTGTGCACAAATGTGCATGTG  891

seq1  TGAGCATGTATTTGGTTTGTCTTACTGTGTGTCTTGGGCTGGCCTTGAAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATGTATTTGGTTTGTCTTACTGTGTGTCTTGGGCTGGCCTTGAAC  941

seq1  TTTCAACTCTCTTTGGCCTGAGCATGTGTCCTTTATTGAGCTCCGTATTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTCTCTTTGGCCTGAGCATGTGTCCTTTATTGAGCTCCGTATTA  991

seq1  GTCAAGAGAACAGAATAAACAGTTCACATGTATGTGTGAAACAGGAAGAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAGAACAGAATAAACAGTTCACATGTATGTGTGAAACAGGAAGAT  1041

seq1  CATGTGGTTAGGAACACCAGGAAGTTTCATGAACTGCCATCTGCATGCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTTAGGAACACCAGGAAGTTTCATGAACTGCCATCTGCATGCTG  1091

seq1  GAGGAGCAGGAAGGTGGATGGCTAAGTCAGTTTGAGCCTAAAGATCCGAG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCAGGAAGGTGGATGGCTAAGTCAGTTTGAGCCTAAAGATCCGAG  1141

seq1  AGAGTCATGAGTGCTGGTGTCACAGGGTAGGTGATAGATGCTCTCAGCTG  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCATGAGTGCTGGTGTCACAGGGTAGGTGATAGATGCTCTCAGCTG  1191

seq1  GAGAAGTGAATTC  1206
      |||||||||||||
seq2  GAGAAGTGAATTC  1204

seq1: chr9_46315853_46315993
seq2: B6Ng01-149D12.g_74_214

seq1  CAAGACATTGGATGCCTGGGAAATCAGCCCCTGGCCTTTTTTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACATTGGATGCCTGGGAAATCAGCCCCTGGCCTTTTTTTTTTTTTT  50

seq1  TTTTTTTCTAAATGTGGTGAAATGTGCTTGGTCTTAAGGGATTTTCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTAAATGTGGTGAAATGTGCTTGGTCTTAAGGGATTTTCTGGT  100

seq1  GTCAGCAACTCCCTAAACTAAGCTCTTCTCCCCCCTTCTCC  141
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAACTCCCTAAACTAAGCTCTTCTCCCCCCTTCTCC  141