BAC Information

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BAC

Clone NameB6Ng01-151A10
Chromosome9 (Build37)
Map Location 25,991,409 - 25,992,566
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666297, 9130004C02Rik, Sept7, EG666327, 2310005P05Rik
Downstream geneB3gat1, BC038479, Glb1l3, Gm1110, LOC330907, Acad8, Thyn1, Vps26b, Ncapd3, Jam3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151A10.bB6Ng01-151A10.g
ACCDH946954DH946955
length1,2571,170
definitionDH946954|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A10, 5' end.DH946955|Mus musculus domesticus DNA, BAC clone: B6Ng01-151A10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagagatggaagagagtatcttgagaatagaagaaatcaatagc
caagtcaaagaaaatgccaaaatctaaaaagtgtctaggaaatatccagg
aaatttgggactctatgaaaagaccaaacctaagaataatagtaatagaa
gaaagagaagattatcagctcaaagacctataaaacatctctaacaacat
catagaagaaagtttctttaatctaaaggaagagatgccttaaatgtaca
gaacatcaaatagattagaccaccagccatgtaataatcagaacactaaa
tgtacagaatagtaaaagctgaaagggaaaaatgttgagtaacatataat
ggctgacctatcagaattatacctgacttctcaacagagactctaaaagc
cagaagggcctgggcagatgtcttccagtccataagacaccacagatatc
aggccagactactatacccagcaaaatttccaatcatcatagatggagaa
aacaagatatttcatgacataagcaaatttaaacagtatctttccactag
ttcagtcctacagaagagataagaaggaaaactccaaaacaaggagtgta
attatacccaagaaaacagaaaaaataaataattccaaaccactcaaaac
aaaagatcacacacacacacacacacacacacccaacaccaacatcacaa
tgacaggaattaccaaccattagtcattaatatcttttaataacaatggc
ctcaattccacaataaaaaccaacaggctaacagagtggacacaaaaaca
gaaacatacctctgcaacaaagagacacagtttctcaaagtaaaagggcc
agaaaagggttttacacacaaatggagccaaaaaacaagaaggagtagcc
aatctcatatcttataaaataaacttttaccaagcgtaatcaaaagaaag
tgaggacacttcatatttcatcaaaggaaaaatccaccagatgacacctc
aaatatgaatatctatgttcacaaatgcaagggcacacacatttatataa
caaacattattaaagcttaaatcacacatcaaaaccttaaatatatagtg
ggggacttcaacattccattgtcagcattgagacagaaaattgcgagaat
tataaacttaacaccattatggatcaagaaattaccagatacgtgcgact
tccacgaacaagaatttcttcttcagaacttaggacttttctcatatgtg
acgctat
gaattccaggtatgttacataaacgccacattacagaagtgtgggcagag
catagttatttcgttccagagagttcaatgtgtcgaaatctgaaaaacac
tttgcctgctggaataacaagactaagaaaaacagtgataactcatgttg
atcatttctatccttgatatgatgtgacaagaatggcattttatttttgt
ggtcatccatccttcctgagatctaaaaccccagtctaatcatgaagaga
acagaaaatcccaaccaaggaatgctttacaatatacctgaccatttttc
ttcctgacaatgaaggtcgtccaaaacaaggaaagactgggcaaccatca
gtggcgagataagaaacatgaaacctaagtaccataaggcataatgaaat
tgtggaaggattgtgacaggataaactgaagactttagttaacaataatg
tatcagtataggtcctttacctgtgagaaacccactttgcaaggcattaa
taataaagaaaatggctgtcattttatgaagactatcttttctatcattt
tattaacaattgtaatactgtaaaaagtctacattaaagtgtgtattctc
aaccatttttttgttttgtaaaactataaaataatatttagaatttaaaa
tgtttaaaatattatttagcataatattttttaaaattatgatacactgt
tataccaggtgaaagatgtgcggtattacataatgaaaccattttttcta
tttttgatattgtaatataattttgcatttccccctttcctttctttcct
gcaaaccctcccatatcctggttctccttcaaattcaagaccccattttt
attcattgttgctatattacatatgtatataaatatgttcccaaggatat
gaatacaaccttctaagtgtgtataatattacttgtatgtacaaaactat
ttaaggaattgctgaaagaaagttaaaggggaaaaatttaaagaggaaaa
tccatgggtcataagactcagtgtttctttaccaattatgccttcagcca
atctagaagatttgatgctatccaaagtcctaagaaaatactgtttagga
ataaaataaattacttttatttaacctgcaaattgtttttggtgccattt
aaatggacaaaatcaaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_25991409_25992566
seq2: B6Ng01-151A10.g_69_1238

seq1  GAATTCCAGGTATGTTACATAAACGCCACATTACAGAAGTGTGGGCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTATGTTACATAAACGCCACATTACAGAAGTGTGGGCAGAG  50

seq1  CATAGTTATTTCGTTCCAGAGAGTTCAATGTGTCGAAATCTGAAAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTATTTCGTTCCAGAGAGTTCAATGTGTCGAAATCTGAAAAACAC  100

seq1  TTTGCCTGCTGGAATAACAAGACTAAGAAAAACAGTGATAACTCATGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGCTGGAATAACAAGACTAAGAAAAACAGTGATAACTCATGTTG  150

seq1  ATCATTTCTATCCTTGATATGATGTGACAAGAATGGCATTTTATTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTATCCTTGATATGATGTGACAAGAATGGCATTTTATTTTTGT  200

seq1  GGTCATCCATCCTTCCTGAGATCTAAAACCCCAGTCTAATCATGAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCCATCCTTCCTGAGATCTAAAACCCCAGTCTAATCATGAAGAGA  250

seq1  ACAGAAAATCCCAACCAAGGAATGCTTTACAATATACCTGACCATTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATCCCAACCAAGGAATGCTTTACAATATACCTGACCATTTTTC  300

seq1  TTCCTGACAATGAAGGTCGTCCAAAACAAGGAAAGACTGGGCAACCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGACAATGAAGGTCGTCCAAAACAAGGAAAGACTGGGCAACCATCA  350

seq1  GTGGCGAGATAAGAAACATGAAACCTAAGTACCATAAGGCATAATGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGAGATAAGAAACATGAAACCTAAGTACCATAAGGCATAATGAAAT  400

seq1  TGTGGAAGGATTGTGACAGGATAAACTGAAGACTTTAGTTAACAATAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGGATTGTGACAGGATAAACTGAAGACTTTAGTTAACAATAATG  450

seq1  TATCAGTATAGGTCCTTTACCTGTGAGAAACCCACTTTGCAAGGCATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTATAGGTCCTTTACCTGTGAGAAACCCACTTTGCAAGGCATTAA  500

seq1  TAATAAAGAAAATGGCTGTCATTTTATGAAGACTATCTTTTCTATCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGAAAATGGCTGTCATTTTATGAAGACTATCTTTTCTATCATTT  550

seq1  TATTAACAATTGTAATACTGTAAAAAGTCTACATTAAAGTGTGTATTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACAATTGTAATACTGTAAAAAGTCTACATTAAAGTGTGTATTCTC  600

seq1  AACCATTTTTTTGTTTTGTAAAACTATAAAATAATATTTAGAATTTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTTTTTGTTTTGTAAAACTATAAAATAATATTTAGAATTTAAAA  650

seq1  TGTTTAAAATATTATTTAGCATAATATTTTTTAAAATTATGATACACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAATATTATTTAGCATAATATTTTTTAAAATTATGATACACTGT  700

seq1  TATACCAGGTGAAAGATGTGCGGTATTACATAATGAAACCATTTTTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAGGTGAAAGATGTGCGGTATTACATAATGAAACCATTTTTTCTA  750

seq1  TTTTTGATATTGTAATATAATTTTGCATTTCCCCCTTTCCTTTCTTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATATTGTAATATAATTTTGCATTTCCCCCTTTCCTTTCTTTCCT  800

seq1  GCAAACCCTCCCATATCCTGGTTCTCCTTCAAATTCAAGACCCCATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCCTCCCATATCCTGGTTCTCCTTCAAATTCAAGACCCCATTTTT  850

seq1  ATTCATTGTTGCTATATTACATATGTATATAAATATGTTCCCAAGGATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGTTGCTATATTACATATGTATATAAATATGTTCCCAAGGATAT  900

seq1  GAATACAACCTTCTAAGTGTGTATAATATTACTTGTATGTACAAAACTA-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATACAACCTTCTAAGTGTGTATAATATTACTTGTATGTACAAAACTAT  950

seq1  TTAAGGAATTGCTG-AAGAAAGTTAAAGGGGAAAAATTAAAAGAGG-AAA  997
      |||||||||||||| ||||||||||||||||||||||| ||||||| |||
seq2  TTAAGGAATTGCTGAAAGAAAGTTAAAGGGGAAAAATTTAAAGAGGAAAA  1000

seq1  TCCATGGGTCATAAGACTCAGTGTT--CTTACCAA-TATGCCTCAAGCCA  1044
      |||||||||||||||||||||||||   ||||||| |||||||  |||||
seq2  TCCATGGGTCATAAGACTCAGTGTTTCTTTACCAATTATGCCTTCAGCCA  1050

seq1  ATCTAG-AGATTTGATGCTATCCAAAGTCCTA--GAAATACTGTTTTAGG  1091
      |||||| |||||||||||||||||||||||||   |||||||| ||||||
seq2  ATCTAGAAGATTTGATGCTATCCAAAGTCCTAAGAAAATACTG-TTTAGG  1099

seq1  AAT-AAATAAATTACTTTTATTAAACTTGC-AATTGTTTTTGGTG-CATT  1138
      ||| |||||||||||||||||| ||| ||| |||||||||||||| ||||
seq2  AATAAAATAAATTACTTTTATTTAACCTGCAAATTGTTTTTGGTGCCATT  1149

seq1  TTAATTGAC-AAATCAAATGC  1158
      | ||| ||| |||||||||||
seq2  TAAATGGACAAAATCAAATGC  1170