BAC Information

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BAC

Clone NameB6Ng01-151G08
Chromosome9 (Build37)
Map Location 93,056,838 - 93,161,637
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009, LOC100040114
Downstream geneLOC674371, LOC384967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151G08.bB6Ng01-151G08.g
ACCDH947223DH947224
length1,1451,068
definitionDH947223|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G08, 5' end.DH947224|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,160,484 - 93,161,637)(93,056,838 - 93,057,908)
sequence
gaattctcttgtctctacatcaccagtgatgaaattatatacctatgcca
atatctccatttttaatgggtactgggatctgaatgcaagtcctcatgtg
tatatgacaggccgtttaccaactgagtcatttcctcactccaccatcat
gttctttctgctgtttaccttttggccacattcactcacttataagatcc
tcccacccaagctaggcctatctggatattccaggatagcttctgaaaca
caagattctttgatttgactatgtttgtaaagttatttttgataatcaag
atagcaaatgcctaagttcttggaattagaacacaaatgttttcatgggc
tcatgatttgtctttcatcatttgtaagctgtgaattaaaacattttctt
cttatttacttttaactcctcaatatatgaagctatatacttcatttcat
ggaagttcctttactcattttttgaaaattaatagccagaatgcaaacta
gaaagcattgagaaatcacatactttaccacaaaatatgatgtttttttc
gagacaggatttctctgtgtagccctggctgtcctggagctcactctgta
gaccaggctggcctcaaactcagaggcatgcctctgcctcccaagtgctg
ggtttaaaggcgtatgctaccactgcctggccacaaaatatgattctatc
tagtaaaatatcctacaaaaattaaaagacaaggtttataaaattggaaa
agtgcttaaacacatataataaatgagatgcttgtttcctttttctcaca
gtgtacacaaaatacactttattgtccatatgactctttggggcaaggcc
atttgtactttactcagatattcttggtggaagtggactatgcataatat
atatgaagtggtgacatctgtaggaggtaaaattactatagtaaacattc
tgacacacacaaataatcatggtacccactcacagaaagttgaaatggca
atatataaagagacaattgatgatgagatatatcaatcttctcttatgaa
atagagagtgatattgctacatcccagaaagcgatcctctcagctctgaa
atcaaggccattgaccacttgcacagattctctacagatgttcat
gaattcagcagattgggctaagaatgtcattgttcaacagagcacatagc
atgcacaatgacagaggtttagtctccagtactgggataaagagggaaat
ttgaattcaccttattctcagactcatttaggaatgaaatttagtttgtg
cttctgttgaggaagccaactgaaggcattaccctcaactcattacttat
ttttaaccacatccaggtaaaatgttaggtcattctgtagtggtcatgaa
tctttgctatccttggctcaggtcctcagctgtctaaggtacccagccct
gttatacttcctaggtgggactccagaagtttggacttaaaagagagaca
atgcaatggtgcacccagtggatccagtttctgtttacacattgtcttca
caataacgtgcatagcctatttttggtgtttgtttgtttgtttggttggt
tttggcttttcttgtcttttgttttgtttttgctactagcattagtttgg
agaattggtaactattaataacaaaacagaaaactttttcttttgtgaga
tgatgtagatatcatcaaatatatagttcaaccaatgaaaaactttaata
agaataaatttgtggacaatgcaactgtatcagaacacaagatattaagg
tcacaatattaaaatttataatattcataattcataatagctttcacaag
catgttgatggcacatgttcacaatttttatattgttattaaacaacaaa
actacagcagaattaattttaacagtcaacattactatggtttggaaaag
ccatgaatctgttctttatttcagaaaaagattattattaattgataaaa
atgtgtttttccctatacatcattattttaatgtattggtcaaagctgtg
ctacagtactggaccaaataattcaagaaaaagtgatatgaatgttgagt
tcttcaaattctaaaggatgaagatcacgttttgtgactttaaacatgaa
tattttcaataaacattcagccaaaagctctgctattttaaatatcacag
ataatagctacataacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_93160484_93161637
seq2: B6Ng01-151G08.b_45_1189 (reverse)

seq1  ATGAACCATCTGTAGAG-ATCTGTGCAGGTGGGTTCAAATGCCCTGGTGT  49
      ||||| ||||||||||| ||||||||| ||||  ||||  ||| || | |
seq2  ATGAA-CATCTGTAGAGAATCTGTGCAAGTGG--TCAATGGCCTTGATTT  47

seq1  CAGAGCTGAGAGGATCTGCCTTTCTGGGATGTAGCAATATTCACTCTCTA  99
      ||||||||||||||||   |||||||||||||||||||| ||||||||||
seq2  CAGAGCTGAGAGGATC--GCTTTCTGGGATGTAGCAATA-TCACTCTCTA  94

seq1  TTTCATAAGAGAAGATTGATATATCTCATCACTCAATTGTCTCTTTATAT  149
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTCATAAGAGAAGATTGATATATCTCATCA-TCAATTGTCTCTTTATAT  143

seq1  ATTGCCCATTTCAACCTTTCTTGTGAGTGGGTACCATGATTATTTGTGTG  199
      |||| ||||||||| ||||| |||||||||||||||||||||||||||||
seq2  ATTG-CCATTTCAA-CTTTC-TGTGAGTGGGTACCATGATTATTTGTGTG  190

seq1  TGTCAGAATGTTTACTATAGTAATTTTACCTCCTACAGATGTCACCACTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAATGTTTACTATAGTAATTTTACCTCCTACAGATGTCACCACTT  240

seq1  CATATATATTATGCATAGTCCACTTCCACCAAGAATATCTGAGTAAAGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATTATGCATAGTCCACTTCCACCAAGAATATCTGAGTAAAGTA  290

seq1  CAAATGGCCTTGCCCCAAAGAGTCATATGGACAATAAAGTGTATTTTGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGCCTTGCCCCAAAGAGTCATATGGACAATAAAGTGTATTTTGTG  340

seq1  TACACTGTGAGAAAAAGGAAACAAGCATCTCATTTATTATATGTGTTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTGAGAAAAAGGAAACAAGCATCTCATTTATTATATGTGTTTAA  390

seq1  GCACTTTTCCAATTTTATAAACCTTGTCTTTTAATTTTTGTAGGATATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTCCAATTTTATAAACCTTGTCTTTTAATTTTTGTAGGATATTT  440

seq1  TACTAGATAGAATCATATTTTGTGGCCAGGCAGTGGTAGCATACGCCTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGATAGAATCATATTTTGTGGCCAGGCAGTGGTAGCATACGCCTTT  490

seq1  AAACCCAGCACTTGGGAGGCAGAGGCATGCCTCTGAGTTTGAGGCCAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGCACTTGGGAGGCAGAGGCATGCCTCTGAGTTTGAGGCCAGCC  540

seq1  TGGTCTACAGAGTGAGCTCCAGGACAGCCAGGGCTACACAGAGAAATCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAGAGTGAGCTCCAGGACAGCCAGGGCTACACAGAGAAATCCT  590

seq1  GTCTCGAAAAAAACATCATATTTTGTGGTAAAGTATGTGATTTCTCAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGAAAAAAACATCATATTTTGTGGTAAAGTATGTGATTTCTCAATG  640

seq1  CTTTCTAGTTTGCATTCTGGCTATTAATTTTCAAAAAATGAGTAAAGGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAGTTTGCATTCTGGCTATTAATTTTCAAAAAATGAGTAAAGGAA  690

seq1  CTTCCATGAAATGAAGTATATAGCTTCATATATTGAGGAGTTAAAAGTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGAAATGAAGTATATAGCTTCATATATTGAGGAGTTAAAAGTAA  740

seq1  ATAAGAAGAAAATGTTTTAATTCACAGCTTACAAATGATGAAAGACAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAGAAAATGTTTTAATTCACAGCTTACAAATGATGAAAGACAAAT  790

seq1  CATGAGCCCATGAAAACATTTGTGTTCTAATTCCAAGAACTTAGGCATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCCCATGAAAACATTTGTGTTCTAATTCCAAGAACTTAGGCATTT  840

seq1  GCTATCTTGATTATCAAAAATAACTTTACAAACATAGTCAAATCAAAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTTGATTATCAAAAATAACTTTACAAACATAGTCAAATCAAAGAA  890

seq1  TCTTGTGTTTCAGAAGCTATCCTGGAATATCCAGATAGGCCTAGCTTGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTTTCAGAAGCTATCCTGGAATATCCAGATAGGCCTAGCTTGGG  940

seq1  TGGGAGGATCTTATAAGTGAGTGAATGTGGCCAAAAGGTAAACAGCAGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGATCTTATAAGTGAGTGAATGTGGCCAAAAGGTAAACAGCAGAA  990

seq1  AGAACATGATGGTGGAGTGAGGAAATGACTCAGTTGGTAAACGGCCTGTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATGATGGTGGAGTGAGGAAATGACTCAGTTGGTAAACGGCCTGTC  1040

seq1  ATATACACATGAGGACTTGCATTCAGATCCCAGTACCCATTAAAAATGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACATGAGGACTTGCATTCAGATCCCAGTACCCATTAAAAATGGA  1090

seq1  GATATTGGCATAGGTATATAATTTCATCACTGGTGATGTAGAGACAAGAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGGCATAGGTATATAATTTCATCACTGGTGATGTAGAGACAAGAG  1140

seq1  AATTC  1154
      |||||
seq2  AATTC  1145

seq1: chr9_93056838_93057908
seq2: B6Ng01-151G08.g_69_1136

seq1  GAATTCAGCAGATTGGGCTAAGAATGTCATTGTTCAACAGAGCACATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGATTGGGCTAAGAATGTCATTGTTCAACAGAGCACATAGC  50

seq1  ATGCACAATGACAGAGGTTTAGTCTCCAGTACTGGGATAAAGAGGGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAATGACAGAGGTTTAGTCTCCAGTACTGGGATAAAGAGGGAAAT  100

seq1  TTGAATTCACCTTATTCTCAGACTCATTTAGGAATGAAATTTAGTTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCACCTTATTCTCAGACTCATTTAGGAATGAAATTTAGTTTGTG  150

seq1  CTTCTGTTGAGGAAGCCAACTGAAGGCATTACCCTCAACTCATTACTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTGAGGAAGCCAACTGAAGGCATTACCCTCAACTCATTACTTAT  200

seq1  TTTTAACCACATCCAGGTAAAATGTTAGGTCATTCTGTAGTGGTCATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCACATCCAGGTAAAATGTTAGGTCATTCTGTAGTGGTCATGAA  250

seq1  TCTTTGCTATCCTTGGCTCAGGTCCTCAGCTGTCTAAGGTACCCAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTATCCTTGGCTCAGGTCCTCAGCTGTCTAAGGTACCCAGCCCT  300

seq1  GTTATACTTCCTAGGTGGGACTCCAGAAGTTTGGACTTAAAAGAGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATACTTCCTAGGTGGGACTCCAGAAGTTTGGACTTAAAAGAGAGACA  350

seq1  ATGCAATGGTGCACCCAGTGGATCCAGTTTCTGTTTACACATTGTCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATGGTGCACCCAGTGGATCCAGTTTCTGTTTACACATTGTCTTCA  400

seq1  CAATAACGTGCATAGCCTATTTTTGGTGTTTGTTTGTTTGTTTGGTTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACGTGCATAGCCTATTTTTGGTGTTTGTTTGTTTGTTTGGTTGGT  450

seq1  TTTGGCTTTTCTTGTCTTTTGTTTTGTTTTTGCTACTAGCATTAGTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTTCTTGTCTTTTGTTTTGTTTTTGCTACTAGCATTAGTTTGG  500

seq1  AGAATTGGTAACTATTAATAACAAAACAGAAAACTTTTTCTTTTGTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGTAACTATTAATAACAAAACAGAAAACTTTTTCTTTTGTGAGA  550

seq1  TGATGTAGATATCATCAAATATATAGTTCAACCAATGAAAAACTTTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAGATATCATCAAATATATAGTTCAACCAATGAAAAACTTTAATA  600

seq1  AGAATAAATTTGTGGACAATGCAACTGTATCAGAACACAAGATATTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAATTTGTGGACAATGCAACTGTATCAGAACACAAGATATTAAGG  650

seq1  TCACAATATTAAAATTTATAATATTCATAATTCATAATAGCTTTCACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATATTAAAATTTATAATATTCATAATTCATAATAGCTTTCACAAG  700

seq1  CATGTTGATGGCACATGTTCACAATTTTTATATTGTTATTAAACAACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGATGGCACATGTTCACAATTTTTATATTGTTATTAAACAACAAA  750

seq1  ACTACAGCAGAATTAATTTTAACAGTCAACATTACTATGGTTTGGAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCAGAATTAATTTTAACAGTCAACATTACTATGGTTTGGAAAAG  800

seq1  CCATGAATCTGTTCTTTATTTCAGAAAAAGATTATTATTAATTGATAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAATCTGTTCTTTATTTCAGAAAAAGATTATTATTAATTGATAAAA  850

seq1  ATGTGTTTTTCCCTATACATCATTATTTTAATGTATTGGTCAAAGCTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTTTCCCTATACATCATTATTTTAATGTATTGGTCAAAGCTGTG  900

seq1  CTACAGTACTGGACCAAATAATTCAAGAAAAAGTGATATGAATGTTGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTACTGGACCAAATAATTCAAGAAAAAGTGATATGAATGTTGAGT  950

seq1  TCCTCCAAATTCCTAAAGGATGAAGATCACGTTTTGTGACTTTAAACATG  1000
      | || |||||| ||||||||||||||||||||||||||||||||||||| 
seq2  T-CTTCAAATT-CTAAAGGATGAAGATCACGTTTTGTGACTTTAAACAT-  997

seq1  GAATAATTTTCCAATAAACATTCAGCAAAAAGCTCTGCTATTTTTATATA  1050
      |||||  ||| ||||||||||||||| ||||||||||||| ||||| |||
seq2  GAATA--TTTTCAATAAACATTCAGCCAAAAGCTCTGCTA-TTTTAAATA  1044

seq1  TCACAGATAATAGCT---TAACAT  1071
      |||||||||||||||   ||||||
seq2  TCACAGATAATAGCTACATAACAT  1068