BAC Information

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BAC

Clone NameB6Ng01-154D14
Chromosome9 (Build37)
Map Location 120,742,597 - 120,873,406
singlet/doubletdoublet
Overlap geneCtnnb1
Upstream geneLOC100039837, Wdr48, Gorasp1, Ttc21a, Axud1, Cmya1, Cx3cr1, Ccr8, Slc25a38, Rpsa, Snora62, EG546166, Mobp, LOC100039898, Myrip, LOC666044, Eif1b, LOC638068, Entpd3, Rpl14, 5830454E08Rik, LOC100040010
Downstream geneUlk4, Trak1, Cck, Lyzl4, Vipr1, LOC100040063, Sec22c, Deb1, Nktr, Kbtbd5, Hhatl, Ccdc13, Higd1a, Ccbp2, Cyp8b1, C730027P07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154D14.bB6Ng01-154D14.g
ACCDH949328DH949329
length1,0321,059
definitionDH949328|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D14, 5' end.DH949329|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,742,597 - 120,743,567)(120,872,349 - 120,873,406)
sequence
gaattcatggcctgggttaaaggcagcagggtttctgttcctattttgga
agcgatattattgcatccgcgggcatttcactgatttcagagttaaaggt
ctgtggctcttttctctgacttcatttatgtttatgttttccccttctca
agcatggagaacaaaggccactagtggtcacttgccccaggtgctcagta
tggtaaatctctcaacccctcctctaagattcccggggctagagacactc
caaaattctggatgcattttggaagggtaattgatacacgggccatatca
tatataagccctccgtggcttctgagagatactttaaacaatggaattaa
tatctaggagcagtgagtgggtatagccgcagcatgaacttagtagcgcc
cctcggcagtctctctccacctgtgcagaaccaacgctggtcaggtcaga
aacgttgctctggttcgcaaagtttctatcagttattcttctcatcgctg
ggacaacacgtctgataagaagcaacacaagaatcttaaggtttatttgg
ctcctcaaggagctgtagctcatcgtggtgaggaatatggtcgtaggggt
gtgagacgcttgccacattgcaccaacaagcagaaagtagcgaccaagta
gtgagcgctgggcgcagctgacttccttcatttgtccgtcttcctcctcc
tcctctttcttcaaatgtggtctgaaatcctggctgtggtggtttggtga
gaaatgtcccacgcaagctctgtatttgaactcttgttactccattggca
tcactgttcagaaagattacagaaccgactgggggtggagcctctggagg
aaatgcgtcattggctgtgagcgctgatgtttacagccttcccccactct
ctgctccctgtgcacggaaaagaatgtgatgagccacctccctgctactg
ctgtgatgcgttctgtggcctatgtggccttccttttgtatcctttgcaa
ctgtagccaacataaaccccttcctaacctta
gaattccaagaatcctagggaggcctgggtgagacttgcacgcacagcaa
gttcagtttgcatgcaggagtgcaggacactagagtccagcagttgtggg
gatgctggtgtcagggcacatttgcttctcccaactggccctcattcctt
acaatctatgccatgtgccaagtgacaattctggggaggagtgtgcacac
atgagccatgtccagaagcagctggcccaggttgggccagtgggcagagg
gccccttctgtagtagggaagctggtcctactgctagcagcagccttgcc
ttgacacggacacggtgatatggagagcctgccagctcccatttagcccc
atgatgaaaacagccataccatgcccaaccaaccgcaaaggcctcagctt
cctgggccaggcaggccctcctcttgcctacaaggccccttggtatgact
ggactcagggctccactgtcctgagcaggaattggatgaggtgacagaca
cagaagcactaaggattccatgcagctaagagtggtctttcaccaagctg
tgtgcccatgtggacctggcctggctgcattatgcagtgattgtggctaa
gtgtcctaaggaagcaggttcgggtcttagctcccctttctgcccagtgc
ttgagttctggaatcttgctagaagctgcttcaaaacaacaagacattcc
tcttcctctccccttttcagaagaacatagaacaatctaaaccaggaagg
ctttaacattccaggacattctgccaggtgattttacaggcaaggggcct
ggggtgtgaagcagggttgctgtctttgctagacactaggcctggcagcc
accgcccacgcctcccattccctgcttctcccactcaaggtgatatggcc
ttgctcccaaggcttataaactactgtggatagatggaccccactggcta
gtggggggaaggagcagcacagctcctcctctgccccgcctccctgccct
gtgctggcccaggctccagcctgcactgcagccttcactccttacctcca
gcagccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_120742597_120743567
seq2: B6Ng01-154D14.b_48_1020

seq1  GAATTCATGGCCTGGGTTAAAGGCAGCAGGGTTTCTGTTCCTATTTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGCCTGGGTTAAAGGCAGCAGGGTTTCTGTTCCTATTTTGGA  50

seq1  AGCGATATTATTGCATCCGCGGGCATTTCACTGATTTCAGAGTTAAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATATTATTGCATCCGCGGGCATTTCACTGATTTCAGAGTTAAAGGT  100

seq1  CTGTGGCTCTTTTCTCTGACTTCATTTATGTTTATGTTTTCCCCTTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTCTTTTCTCTGACTTCATTTATGTTTATGTTTTCCCCTTCTCA  150

seq1  AGCATGGAGAACAAAGGCCACTAGTGGTCACTTGCCCCAGGTGCTCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGAGAACAAAGGCCACTAGTGGTCACTTGCCCCAGGTGCTCAGTA  200

seq1  TGGTAAATCTCTCAACCCCTCCTCTAAGATTCCCGGGGCTAGAGACACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATCTCTCAACCCCTCCTCTAAGATTCCCGGGGCTAGAGACACTC  250

seq1  CAAAATTCTGGATGCATTTTGGAAGGGTAATTGATACACGGGCCATATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCTGGATGCATTTTGGAAGGGTAATTGATACACGGGCCATATCA  300

seq1  TATATAAGCCCTCCGTGGCTTCTGAGAGATACTTTAAACAATGGAATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGCCCTCCGTGGCTTCTGAGAGATACTTTAAACAATGGAATTAA  350

seq1  TATCTAGGAGCAGTGAGTGGGTATAGCCGCAGCATGAACTTAGTAGCGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGGAGCAGTGAGTGGGTATAGCCGCAGCATGAACTTAGTAGCGCC  400

seq1  CCTCGGCAGTCTCTCTCCACCTGTGCAGAACCAACGCTGGTCAGGTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCAGTCTCTCTCCACCTGTGCAGAACCAACGCTGGTCAGGTCAGA  450

seq1  AACGTTGCTCTGGTTCGCAAAGTTTCTATCAGTTATTCTTCTCATCGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTGCTCTGGTTCGCAAAGTTTCTATCAGTTATTCTTCTCATCGCTG  500

seq1  GGACAACACGTCTGATAAGAAGCAACACAAGAATCTTAAGGTTTATTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACACGTCTGATAAGAAGCAACACAAGAATCTTAAGGTTTATTTGG  550

seq1  CTCCTCAAGGAGCTGTAGCTCATCGTGGTGAGGAATATGGTCGTAGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAAGGAGCTGTAGCTCATCGTGGTGAGGAATATGGTCGTAGGGGT  600

seq1  GTGAGACGCTTGCCACATTGCACCAACAAGCAGAAAGTAGCGACCAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACGCTTGCCACATTGCACCAACAAGCAGAAAGTAGCGACCAAGTA  650

seq1  GTGAGCGCTGGGCGCAGCTGACTTCCTTCATTTGTCCGTCTTCCTCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCGCTGGGCGCAGCTGACTTCCTTCATTTGTCCGTCTTCCTCCTCC  700

seq1  TCCTCTTTCTTCAAATGTGGTCTGAAATCCTGGCTGTGGTGGTTTGGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTCTTCAAATGTGGTCTGAAATCCTGGCTGTGGTGGTTTGGTGA  750

seq1  GAAATGTCCCACGCAAGCTCTGTATTTGAACTCTTGTTACTCCATTGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCCCACGCAAGCTCTGTATTTGAACTCTTGTTACTCCATTGGCA  800

seq1  TCACTGTTCAGAAAGATTACAGAACCGACTGGGGGTGGAGCCTCTGGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTCAGAAAGATTACAGAACCGACTGGGGGTGGAGCCTCTGGAGG  850

seq1  AAATGCGTCATTGGCTGTGAGCGCTGATGTTTTACAGCCTT-CCCCACTC  899
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  AAATGCGTCATTGGCTGTGAGCGCTGATG-TTTACAGCCTTCCCCCACTC  899

seq1  TCTGCTTCCTGTGCACGG-ATAGAATGTGATGAGCCAACTTCCTGCTACT  948
      |||||| ||||||||||| | |||||||||||||||| || |||||||||
seq2  TCTGCTCCCTGTGCACGGAAAAGAATGTGATGAGCCACCTCCCTGCTACT  949

seq1  GCTGTGATGCGTTCTGT-GCCTAT  971
      ||||||||||||||||| ||||||
seq2  GCTGTGATGCGTTCTGTGGCCTAT  973

seq1: chr9_120872349_120873406
seq2: B6Ng01-154D14.g_68_1126 (reverse)

seq1  AGTGGCTGCTGGAGTTAGGGAGTG-AGGCTGCAGTGCAGGCTGGAGCCTG  49
      |||||||||||||| || |||||| |||||||||||||||||||||||||
seq2  AGTGGCTGCTGGAGGTAAGGAGTGAAGGCTGCAGTGCAGGCTGGAGCCTG  50

seq1  GGCCAGCACAGGGCAGGGAGGCGGGGCAGAGGAGGAGCTGTGCTTGCCTC  99
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  GGCCAGCACAGGGCAGGGAGGCGGGGCAGAGGAGGAGCTGTGCT--GCTC  98

seq1  CTTCCCCCCACTAGCCAGT-GTGTTCATCTATTCCACAGTAGTTTATAAG  148
      ||||||||||||||||||| | || |||||| ||||||||||||||||||
seq2  CTTCCCCCCACTAGCCAGTGGGGTCCATCTA-TCCACAGTAGTTTATAAG  147

seq1  CTTGGGGAGCAA-GCCATATCACCTTGAGTGGGAGAAGCAGGGAATGGGA  197
      | | |||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGAGCAAGGCCATATCACCTTGAGTGGGAGAAGCAGGGAATGGGA  197

seq1  GGCGTGGGCGGTGGCTGCCAGGCCTAGTGTCTAGC-AAGACAGCAACCCT  246
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGCGTGGGCGGTGGCTGCCAGGCCTAGTGTCTAGCAAAGACAGCAACCCT  247

seq1  GCTTCACACCCCAGGCCCCTTGCCTGTAAAATCACCTGGCAGAATGTCCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACACCCCAGGCCCCTTGCCTGTAAAATCACCTGGCAGAATGTCCT  297

seq1  GGAATGTTAAAGCCTTCCTGGTTTAGATTGTTCTATGTTCTTCTGAAAAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTAAAGCCTTCCTGGTTTAGATTGTTCTATGTTCTTCTGAAAAG  347

seq1  GGGAGAGGAAGAGGAATGTCTTGTTGTTTTGAAGCAGCTTCTAGCAAGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGAAGAGGAATGTCTTGTTGTTTTGAAGCAGCTTCTAGCAAGAT  397

seq1  TCCAGAACTCAAGCACTGGGCAGAAAGGGGAGCTAAGACCCGAACCTGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACTCAAGCACTGGGCAGAAAGGGGAGCTAAGACCCGAACCTGCT  447

seq1  TCCTTAGGACACTTAGCCACAATCACTGCATAATGCAGCCAGGCCAGGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGGACACTTAGCCACAATCACTGCATAATGCAGCCAGGCCAGGTC  497

seq1  CACATGGGCACACAGCTTGGTGAAAGACCACTCTTAGCTGCATGGAATCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGCACACAGCTTGGTGAAAGACCACTCTTAGCTGCATGGAATCC  547

seq1  TTAGTGCTTCTGTGTCTGTCACCTCATCCAATTCCTGCTCAGGACAGTGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTTCTGTGTCTGTCACCTCATCCAATTCCTGCTCAGGACAGTGG  597

seq1  AGCCCTGAGTCCAGTCATACCAAGGGGCCTTGTAGGCAAGAGGAGGGCCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGAGTCCAGTCATACCAAGGGGCCTTGTAGGCAAGAGGAGGGCCT  647

seq1  GCCTGGCCCAGGAAGCTGAGGCCTTTGCGGTTGGTTGGGCATGGTATGGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCCCAGGAAGCTGAGGCCTTTGCGGTTGGTTGGGCATGGTATGGC  697

seq1  TGTTTTCATCATGGGGCTAAATGGGAGCTGGCAGGCTCTCCATATCACCG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATCATGGGGCTAAATGGGAGCTGGCAGGCTCTCCATATCACCG  747

seq1  TGTCCGTGTCAAGGCAAGGCTGCTGCTAGCAGTAGGACCAGCTTCCCTAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGTGTCAAGGCAAGGCTGCTGCTAGCAGTAGGACCAGCTTCCCTAC  797

seq1  TACAGAAGGGGCCCTCTGCCCACTGGCCCAACCTGGGCCAGCTGCTTCTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGGGGCCCTCTGCCCACTGGCCCAACCTGGGCCAGCTGCTTCTG  847

seq1  GACATGGCTCATGTGTGCACACTCCTCCCCAGAATTGTCACTTGGCACAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGCTCATGTGTGCACACTCCTCCCCAGAATTGTCACTTGGCACAT  897

seq1  GGCATAGATTGTAAGGAATGAGGGCCAGTTGGGAGAAGCAAATGTGCCCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGATTGTAAGGAATGAGGGCCAGTTGGGAGAAGCAAATGTGCCCT  947

seq1  GACACCAGCATCCCCACAACTGCTGGACTCTAGTGTCCTGCACTCCTGCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAGCATCCCCACAACTGCTGGACTCTAGTGTCCTGCACTCCTGCA  997

seq1  TGCAAACTGAACTTGCTGTGCGTGCAAGTCTCACCCAGGCCTCCCTAGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTGAACTTGCTGTGCGTGCAAGTCTCACCCAGGCCTCCCTAGGA  1047

seq1  TTCTTGGAATTC  1058
      ||||||||||||
seq2  TTCTTGGAATTC  1059