BAC Information

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BAC

Clone NameB6Ng01-155D18
Chromosome9 (Build37)
Map Location 81,543,550 - 81,543,959
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666534, LOC100039038, Htr1b
Downstream geneLOC671392, 4930486G11Rik, LOC100039085
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D18.bB6Ng01-155D18.g
ACCDH950074DH950075
length4031,148
definitionDH950074|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D18, 5' end.DH950075|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgcaggaatatcaacagagtcaactgatgtggactcttgggactttcaga
atttgaaaccagcgagcacacatgggctagacttaagccttcccaaacat
atgtagcagacatacagcttggtcttcctgtgtgttccaaacaactggaa
tgagggctatctcaaaagctgttgcctgaacatgagatatgttctaggtg
ggctggcttgtctgacctcagtgggagaggcagtgtagcaacttgaagtg
agagagtatgggggtattcaggggtagggggggacctgcttagaagagaa
ttggaggaggatggaagaagtattatggaaggggtgactagaagggggct
ggtgagcttgatgtaaaatgagttaattaaaaaaaaaaattaagattaaa
aga
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctgaaatcagtctggcggttcctcag
aaaattggacacagtactactggaggatcctgcaaaacatctcctgggca
tatatccagaagattccccaaccggtaagaaggacacatgctccactatg
gtcatagcagccttatttataatagccagacactggaaagaatccaggtg
tccatcgacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtaatattcagctactcaaaagaatgcatttatgaaattcctaggtaaa
tggatgcacctggagggcatcatcctgagtgaggtgattcaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaact
taaaatacccaagatacaatatacaatttgcaaaacacatgaaactctag
aagaacgaagaccaaagtgtggacactttgccccttcttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgtgacga
aaggatggaccatctagagactgccatatccagggattcatctcataatc
agcctccaaacgctgacaccattgcataccctagcaagattttgctgaaa
ggacccagatatagctatctcttgtgagactatgctgggggctagcaaca
cataagtggatgctcacagtcagctattggatggatcacagggccccaat
ggaggagctaagagaaagtacccatggagctaaaggggtctgcaccctat
agtgacacacttatcactacagtactcccagagctcatgtctctagctgc
atatgtagcagagacgcttgctggccatcacttgaagagaggccatggtt
tacaactttaagatcttcagttacagggaacgccaggccaagaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_81543550_81543959
seq2: B6Ng01-155D18.b_44_452 (reverse)

seq1  TCTTTTAATCTTAATTTTGTTTTTTTTAGTTACTCATTTTACATCCTGCT  50
      |||||||||||||||||| ||||||| | | ||||||||||||||  |||
seq2  TCTTTTAATCTTAATTTT-TTTTTTTAATTAACTCATTTTACATCAAGCT  49

seq1  CACCAGCCCCCTTCTAGTCACCCCTTCCATAATACTTCTTCCATCCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCCCCCTTCTAGTCACCCCTTCCATAATACTTCTTCCATCCTCCT  99

seq1  CCAATTCTCTTCTAAGCAGGTCCCCCCCTACCCCTGAATACCCCCATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCTCTTCTAAGCAGGTCCCCCCCTACCCCTGAATACCCCCATACT  149

seq1  CTCTCACTTCAAGTTGCTACACTGCCTCTCCCACTGAGGTCAGACAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTTCAAGTTGCTACACTGCCTCTCCCACTGAGGTCAGACAAGCC  199

seq1  AGCCCACCTAGAACATATCTCATGTTCAGGCAACAGCTTTTGAGATAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACCTAGAACATATCTCATGTTCAGGCAACAGCTTTTGAGATAGCC  249

seq1  CTCATTCCAGTTGTTTGGAACACACAGGAAGACCAAGCTGTATGTCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCCAGTTGTTTGGAACACACAGGAAGACCAAGCTGTATGTCTGCT  299

seq1  ACATATGTTTGGGAAGGCTTAAGTCTAGCCCATGTGTGCTCGCTGGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTTTGGGAAGGCTTAAGTCTAGCCCATGTGTGCTCGCTGGTTTC  349

seq1  AAATTCTGAAAGTCCCAAGAGTCCACATCAGTTGACTCTGTTGATATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTGAAAGTCCCAAGAGTCCACATCAGTTGACTCTGTTGATATTCC  399

seq1  TGCAGAATTC  410
      ||||||||||
seq2  TGCAGAATTC  409