BAC Information

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BAC

Clone NameB6Ng01-155G07
Chromosome9 (Build37)
Map Location 23,680,288 - 23,681,397
singlet/doubletsinglet
Overlap geneLOC100040878
Upstream geneBbs9, Bmper, LOC100040866
Downstream geneLOC100040893, Npsr1, Dpy19l1, Cypt4, Tbx20, LOC666251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155G07.bB6Ng01-155G07.g
ACCDH950189DH950190
length1,1001,158
definitionDH950189|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G07, 5' end.DH950190|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccatggtcacagccttctcggcagccacctgctccttcttct
caatctcctctgagtctctgtagaagtaaagatcagacataacctcccaa
gggtgctcacaggagatagaacctcatctgcagggtacttcctgggccag
catccaccacactgaatgagctaacattcatgtctaacaaattgttgttg
ttgttgttgttgttgttttgttgttttgtttttcgagacagggtttctct
gtgtagccatggctgtcctgaaactcactttgtagaccagactggccttg
aattcagaaatccacctgcctctgcctcccgagtgctgggattaaaggca
tgcgccaccaagcccggcttcatgtctaacatttaagtgggcataaagat
tgtttaaaaaactagttatttaatttctgagaaacttatgacattttctt
caatttcttttctgggttgaacaaagctcttttggttcacacttttcact
catttttgcttttcagaatttctgctgtaatatcacttataaccttttca
cctgcttatgcatacacaattgtgtctgattactgttctaaagtttcatt
ctggatttgtctttctgtggatattttctttaattgattcagatgagatg
tgaccttctggctttctaggtttttgttttctttttaaatcatattgtag
tgtttttccatgattcctcctttaatggtatctgattctcgcagtattag
gaagtctaggagagtgaatgttgtgttgtgtttgctcgttctgttggtgg
agcaagggttccctgtctcctgatcttctcattcttgtttatgtcgcagc
gctatttctcctcatgctttaaagcttacatttcactagtaaattgtcaa
ggaacatgcttgtccctttcatgtctttaacttcatgtttatgatgttaa
agcatggtgtgtttaaagattcatctcaatcatctctctcttgaatagtg
tctaccctttaagccataaggtcttgctggcctgtgggtctagtcattta
aataatttgaaatccttctttacatttgtgtttgaatcaacgaatatttt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaaccaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctgtcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcactcaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatataatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgttgatactatgcccctccttagaagtgggaa
caaaacacctgtggaaggagttacagagacaaagtttggagcggagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgtatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggtcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctccaat
ggaggagctagagaaagtacccaagagctaaagggatctgcaccctgtag
tgcacacatattatgaactaacagtacccgagctctgactctagctgcat
atgtatccaaagatgctagtcggccatccttgaaagaagtcaattgtaca
tgcaacttatatgccgatacagggacgtcatggtcaaagagaaaatatgt
ggttgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_23680288_23681397
seq2: B6Ng01-155G07.b_47_1146 (reverse)

seq1  AAAATATTACAGTTGATCCAAACACAAAATGTAAAGAAGGAATTTCAAAA  50
      ||||||||   |||||| ||||||| |||||||||||||| ||||| |||
seq2  AAAATATT--CGTTGATTCAAACAC-AAATGTAAAGAAGG-ATTTC-AAA  45

seq1  TTATTTAAATGACTAGACCCCACAGGCAAGCAAGACC-TATGGCTTAAAG  99
      ||||||||||||||||| ||||||||| ||||||||| ||||||||||||
seq2  TTATTTAAATGACTAGA-CCCACAGGCCAGCAAGACCTTATGGCTTAAAG  94

seq1  GGTAGACACTATTCAAGAGGAGAGATGATTGAAGATGAATCTTTAAACCA  149
      |||||||||||||||||| |||||||||||| ||||||||||||||| ||
seq2  GGTAGACACTATTCAAGA-GAGAGATGATTG-AGATGAATCTTTAAA-CA  141

seq1  CACCCATGCTTTAACATCATAAACATGAAGTTAAAGACATGAAAAGGGAC  199
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CA-CCATGCTTTAACATCATAAACATGAAGTTAAAGACATG-AAAGGGAC  189

seq1  AAGCATGTTCCTTGACAATTTACTAGTGAAATGTAAGCTTTAAAGCATGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGTTCCTTGACAATTTACTAGTGAAATGTAAGCTTTAAAGCATGA  239

seq1  GGAGAAATAGCGCTGCGACATAAACAAGAATGAGAAGATCAGGAGACAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAATAGCGCTGCGACATAAACAAGAATGAGAAGATCAGGAGACAGG  289

seq1  GAACCCTTGCTCCACCAACAGAACGAGCAAACACAACACAACATTCACTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTTGCTCCACCAACAGAACGAGCAAACACAACACAACATTCACTC  339

seq1  TCCTAGACTTCCTAATACTGCGAGAATCAGATACCATTAAAGGAGGAATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGACTTCCTAATACTGCGAGAATCAGATACCATTAAAGGAGGAATC  389

seq1  ATGGAAAAACACTACAATATGATTTAAAAAGAAAACAAAAACCTAGAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAACACTACAATATGATTTAAAAAGAAAACAAAAACCTAGAAAG  439

seq1  CCAGAAGGTCACATCTCATCTGAATCAATTAAAGAAAATATCCACAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGGTCACATCTCATCTGAATCAATTAAAGAAAATATCCACAGAAA  489

seq1  GACAAATCCAGAATGAAACTTTAGAACAGTAATCAGACACAATTGTGTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATCCAGAATGAAACTTTAGAACAGTAATCAGACACAATTGTGTAT  539

seq1  GCATAAGCAGGTGAAAAGGTTATAAGTGATATTACAGCAGAAATTCTGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGCAGGTGAAAAGGTTATAAGTGATATTACAGCAGAAATTCTGAA  589

seq1  AAGCAAAAATGAGTGAAAAGTGTGAACCAAAAGAGCTTTGTTCAACCCAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAATGAGTGAAAAGTGTGAACCAAAAGAGCTTTGTTCAACCCAG  639

seq1  AAAAGAAATTGAAGAAAATGTCATAAGTTTCTCAGAAATTAAATAACTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAATTGAAGAAAATGTCATAAGTTTCTCAGAAATTAAATAACTAG  689

seq1  TTTTTTAAACAATCTTTATGCCCACTTAAATGTTAGACATGAAGCCGGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAACAATCTTTATGCCCACTTAAATGTTAGACATGAAGCCGGGC  739

seq1  TTGGTGGCGCATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGCGCATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGG  789

seq1  ATTTCTGAATTCAAGGCCAGTCTGGTCTACAAAGTGAGTTTCAGGACAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAATTCAAGGCCAGTCTGGTCTACAAAGTGAGTTTCAGGACAGC  839

seq1  CATGGCTACACAGAGAAACCCTGTCTCGAAAAACAAAACAACAAAACAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTACACAGAGAAACCCTGTCTCGAAAAACAAAACAACAAAACAAC  889

seq1  AACAACAACAACAACAACAATTTGTTAGACATGAATGTTAGCTCATTCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACAACAACAATTTGTTAGACATGAATGTTAGCTCATTCAG  939

seq1  TGTGGTGGATGCTGGCCCAGGAAGTACCCTGCAGATGAGGTTCTATCTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGATGCTGGCCCAGGAAGTACCCTGCAGATGAGGTTCTATCTCC  989

seq1  TGTGAGCACCCTTGGGAGGTTATGTCTGATCTTTACTTCTACAGAGACTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCACCCTTGGGAGGTTATGTCTGATCTTTACTTCTACAGAGACTC  1039

seq1  AGAGGAGATTGAGAAGAAGGAGCAGGTGGCTGCCGAGAAGGCTGTGACCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATTGAGAAGAAGGAGCAGGTGGCTGCCGAGAAGGCTGTGACCA  1089

seq1  TGGAAGAATTC  1110
      |||||||||||
seq2  TGGAAGAATTC  1100