BAC Information

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BAC

Clone NameB6Ng01-159O06
Chromosome9 (Build37)
Map Location 78,829,744 - 78,830,850
singlet/doubletsinglet
Overlap genenone
Upstream geneElovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159O06.bB6Ng01-159O06.g
ACCDH953422DH953423
length1,2171,105
definitionDH953422|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O06, 5' end.DH953423|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaggatacaatccacagaactcaagaaggttaacaagcagaag
ggcccaagaaaggatgcttcaatcccagttggaaaggagaagagagcaat
cagagaaaacagagagaaggagtaacctgtgtaggagaggaaaggaggag
aaagaagaacactatcaggtattggcaggagggggaggagaaaatccctg
agggccagcagaataaatttaaatatgcaaccttcaaagtaggaagttta
gggaccctctagaatgtaccagagatctggaaagtgactctcaggactca
aagcgggggtaggggagaaccttagaagaaatgcccaacaagtgtggaga
gggaacttgtagagtccacctccagtagaaaaagaaagggcatcaagtgg
tgagatggggttgctatagcacagttaaaaactctgacccagaattgttc
ctgtctaaaagaaatccagggacaaaaatggagaagagactgagggaaag
taggtccagtgaccagttcaatttgggatccatctcaaggagaggctcca
agtcctcacactattactgatgctatgttgtgcttacagacagaagccta
gcatggctcccctcaaagaggctcaactaagctaactaagaagatgcaga
tacttacacccaaccaatggactgaaatcagagacctctgtggttgaatt
agggaaaggctggaagaagctgaggaggagggcaaccccagagggaaatc
agcagtctcaactaagctggatccctgaaatctctccaactaggcagtgt
acattatgtgctccaaggccccagacacatacagcagaggactaccttgt
ctggcctcaataagagaagatgggtctaacactggaaagacttgaggccc
catggtgtgaggatgcctggtaagcggtaagagggacaacctcttggaga
caggaggaggaggaatcgatgaggaactgtgggagggtgatcaggagatg
ggcaatggatggactaataaaattaaagtaataagaaaatttctgaatag
ttttatttaaaacttgccaagaatggtgtttgtcatggactgggtatttt
caacactatgatatgtcctctacagcttggctaagctaaaaactgtaagt
attaaaatcaattgcgtgaagataacctggcgcttagccagcgatcatgc
gcttgcacgtcatctgg
gaattccatggttgtggtaactgacctcagtgatgtttttggaacattac
ttttgttactttgggaacagataataactgaacagcttcagttcatactg
ggtgggatggtgatgctaacttaaaacaaacagccaacaaaatctcacat
ttgaataagtcactgtagagcataagtcaaagaactattaggaacactta
aagggagtttgtttctgatttcctattacatctatctatctatctatcta
tctatctatctatctatctatctatctatctttctatctatttaattatc
atctatctcacctatcatcagtctatcatttatctatttgtctaagctta
attaaagtacaatttacatacacttaatctctgttaagttcacaattgct
tgggctttagtattggtataaaattgtggaaataccatcaagaccttata
ttttctcgtcaccctcttcaggtattcccttaccctgacctttggctatg
gatacctgctatattgcagactcttaagtttttttctttgtctaaagttt
catttaaatggaattatatagtttgcacttttgctcacctttttgattta
ttataaaggttttataattcttatcatttgttacattttattttgtttct
tttatcactgagtggtgttctggtatgtgactatattatgaattatttat
ttctccccttgatagtggacattctagtttttgactgttatgaatgatgt
tgcaataaacacgtgtttgtcccagtatagtttttatttgtcttgaacaa
atcttcagagtgggttttctggattctatattggcaggatagagaaaatt
gccaacacaagaatgaaatgtagtcctttactctgaagtctgactgattc
tttgtcagctgagaacaaaaattccagacaaaaaatctgcttagaagcct
tctctcttcctaactgcaagactgtgaagtcctgtacattctgctagaat
ccgctttatttataaaacttctgtgtttcccagttcagccagcatttact
gtttttacccctcttgataaacagatgaacagtatttgatttaactagga
ttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_78829744_78830850
seq2: B6Ng01-159O06.g_67_1171

seq1  GAATTCCATGGTTGTGGTAACTGACCTCAGTGATGTTTTTGGAACATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTTGTGGTAACTGACCTCAGTGATGTTTTTGGAACATTAC  50

seq1  TTTTGTTACTTTGGGAACAGATAATAACTGAACAGCTTCAGTTCATACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTACTTTGGGAACAGATAATAACTGAACAGCTTCAGTTCATACTG  100

seq1  GGTGGGATGGTGATGCTAACTTAAAACAAACAGCCAACAAAATCTCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGATGGTGATGCTAACTTAAAACAAACAGCCAACAAAATCTCACAT  150

seq1  TTGAATAAGTCACTGTAGAGCATAAGTCAAAGAACTATTAGGAACACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAGTCACTGTAGAGCATAAGTCAAAGAACTATTAGGAACACTTA  200

seq1  AAGGGAGTTTGTTTCTGATTTCCTATTACATCTATCTATCTATCTATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGTTTGTTTCTGATTTCCTATTACATCTATCTATCTATCTATCTA  250

seq1  TCTATCTATCTATCTATCTATCTATCTATCTTTCTATCTATTTAATTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTATCTATCTATCTATCTTTCTATCTATTTAATTATC  300

seq1  ATCTATCTCACCTATCATCAGTCTATCATTTATCTATTTGTCTAAGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTCACCTATCATCAGTCTATCATTTATCTATTTGTCTAAGCTTA  350

seq1  ATTAAAGTACAATTTACATACACTTAATCTCTGTTAAGTTCACAATTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTACAATTTACATACACTTAATCTCTGTTAAGTTCACAATTGCT  400

seq1  TGGGCTTTAGTATTGGTATAAAATTGTGGAAATACCATCAAGACCTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTTAGTATTGGTATAAAATTGTGGAAATACCATCAAGACCTTATA  450

seq1  TTTTCTCGTCACCCTCTTCAGGTATTCCCTTACCCTGACCTTTGGCTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCGTCACCCTCTTCAGGTATTCCCTTACCCTGACCTTTGGCTATG  500

seq1  GATACCTGCTATATTGCAGACTCTTAAGTTTTTTTCTTTGTCTAAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTGCTATATTGCAGACTCTTAAGTTTTTTTCTTTGTCTAAAGTTT  550

seq1  CATTTAAATGGAATTATATAGTTTGCACTTTTGCTCACCTTTTTGATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAATGGAATTATATAGTTTGCACTTTTGCTCACCTTTTTGATTTA  600

seq1  TTATAAAGGTTTTATAATTCTTATCATTTGTTACATTTTATTTTGTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGGTTTTATAATTCTTATCATTTGTTACATTTTATTTTGTTTCT  650

seq1  TTTATCACTGAGTGGTGTTCTGGTATGTGACTATATTATGAATTATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACTGAGTGGTGTTCTGGTATGTGACTATATTATGAATTATTTAT  700

seq1  TTCTCCCCTTGATAGTGGACATTCTAGTTTTTGACTGTTATGAATGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCCTTGATAGTGGACATTCTAGTTTTTGACTGTTATGAATGATGT  750

seq1  TGCAATAAACACGTGTTTGTCCCAGTATAGTTTTTATTTGTCTTGAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAAACACGTGTTTGTCCCAGTATAGTTTTTATTTGTCTTGAACAA  800

seq1  ATCTTCAGGAGTGGGTTTTCTGGATTCTATATTGGCAGGATAGAGAAAAT  850
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCA-GAGTGGGTTTTCTGGATTCTATATTGGCAGGATAGAGAAAAT  849

seq1  TGCCAACACAAGAATGAAATGTAGTCCTTTACTCTGAAGTCTGACTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACACAAGAATGAAATGTAGTCCTTTACTCTGAAGTCTGACTGATT  899

seq1  CTTTGTCAGCTGAGAACAAAAATTCCAAGACAAAAAAATCTGCTTAG-AG  949
      |||||||||||||||||||||||||| |||| ||||||||||||||| ||
seq2  CTTTGTCAGCTGAGAACAAAAATTCC-AGAC-AAAAAATCTGCTTAGAAG  947

seq1  CCTTCTCTCTTCCTAACTGCAAAGACTGTGAAGTCCTGTACA-TCTGCTA  998
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  CCTTCTCTCTTCCTAACTGC-AAGACTGTGAAGTCCTGTACATTCTGCTA  996

seq1  GAAT-CGCTTTA-TTATAGAAACTTCTGT-TTTCCCAGTTCAGCCAGCAT  1045
      |||| ||||||| ||||| |||||||||| ||||||||||||||||||||
seq2  GAATCCGCTTTATTTATA-AAACTTCTGTGTTTCCCAGTTCAGCCAGCAT  1045

seq1  TAACTG-TTTCACCCCTCCTTGATAAAACAGATGAACGAGTATTTGATTA  1094
      | |||| ||| |||||| |||||| |||||||||||| ||||||||||| 
seq2  TTACTGTTTTTACCCCT-CTTGAT-AAACAGATGAAC-AGTATTTGATTT  1092

seq1  AACTAGCATTCTG  1107
      |||||| ||||||
seq2  AACTAGGATTCTG  1105