BAC Information

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BAC

Clone NameB6Ng01-163N21
Chromosome9 (Build37)
Map Location 49,916,179 - 49,916,374
singlet/doubletsinglet
Overlap genenone
Upstream geneTmprss5, EG235327, Drd2, Ankk1, Ttc12, Ncam1
Downstream geneEG667975, LOC100042806, LOC100043346, LOC672372, 1600029D21Rik, Pts, Bcdo2, Tex12, Il18, Sdhd, Timm8b, AU019823, Pih1d2, Dlat, Dixdc1, 2310030G06Rik, Hspb2, Cryab, 1110032A03Rik, D630004A14Rik, Alg9, Ppp2r1b, Snf1lk2, Layn, 4833427G06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163N21.bB6Ng01-163N21.g
ACCDH956346DH956347
length7231,207
definitionDH956346|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N21, 5' end.DH956347|Mus musculus domesticus DNA, BAC clone: B6Ng01-163N21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgtttccttacatccaagtaatattccatcttctacagttac
atttttcttatctattcattcgctgatggatatctaggtggacttcaatt
tttacctgttgtgaactgagtcacaattagcatgaaagtggagctatctc
tgtagttggtgtcttagttagaatttcattgccatgaagagacaccatga
ccaaggcaactcttataaaggacaacatttacttcaggctggcttacagt
ttcagaggttcagtccattaccatcatggcaggaggcatgacaacaggta
gacagatatggtggctggaggacctgggagttctacatcttaatcctaag
gctgccaggagaagaatggcttccaaaggtagccaggaggtgtctctctc
tctctctctctcttcctctctctctctctctctctctcactctctctcgc
tcacccgctcaatgcccaagaccaagaatcaaaaatgcgcatcagactta
gacagactctcgccatcaaaagagacacactttgcatacaccaacaagat
tttcctgacaggaccctgatatagctgtctcctgtgaggctatgccagtg
cctggaaaatacagaagtggatgctcacagtcatctattggatgggaaca
aagggccccccatggaggagctagataaagtacccaaggaactgaatggg
ttccccagccctataggagaaac
gaattcaaggaggtggactcccagaaaatcaaataaccccattaaaaaat
ggggctcagagctgaacaaagaattttcacctgaggaataccgaatggct
gagaagcacctgaaaaaaatgttcaacatccttaatcatcagggaaatgc
aaatcaaaacaaccctgagattccacttcacaccagtcagaatggctaag
atcaaaaattcatgtgacagcagatgctggtgaggatgtggagacagagc
aacactcctccattgttggtgggactgcaagtttgtacaaccactctgga
aatcagtctggcggttccacagaaaattggacatagtactactggagaat
cctacagtacctcacctggacatatattcagaggatgtcccaacgggtaa
ggacacatgctccactatgttcatagcagccttacttataatagccagaa
gttggaaagatcccagatgcccctcaacagaggaatgaatacagaaaatg
tggtacatttacacaatggagtactactcagctattaaaaagaatgaatt
tatgaaattcctaggcaaatggatggacctggagggcatcatcctgagtg
aggtaacccaatcacataggaactcacacaacatgtactcactgataagt
ggatattaggccagaaacttaggatcctcaagatataagatacaatttgc
taaacgcatgatactcaagaagaacgaagaccaaagtgtgaacactttgc
cccttcttagaattgggaacaaaatacccatggaaggagttacacagaca
aaattttggagctgtgacgaaaggatggaccatctattgattgccatatc
cagggatccatcccataatcagcttccaaatgctgacaccattgcataca
ctagcaagattttgctgaaaggacccagatatagctgtcttttgtgagac
atgccgggcctagcaatcacagaagtggatgctcacagtcagctatggat
ggatcacaggagcccatggagagctagagaaagtaccaatggagcttacg
ggactgcacctttaaggtggaacaacaaatgactaccagtacccggattc
tcttgtctctagctgcattgtattcaaagatggtcttatttggcattact
ggtatgagagccatggaacttcacctttatatggccagacattcaggata
aataagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_49916179_49916374
seq2: B6Ng01-163N21.b_575_771 (reverse)

seq1  GTTTCTCCTATAGAGCTGCAG-ACTCCTTTAGCTCCTTGGGTACTTTCTC  49
      ||||||||||||| ||||  | || | || || |||||||||||||| ||
seq2  GTTTCTCCTATAGGGCTGGGGAACCCATTCAGTTCCTTGGGTACTTTATC  50

seq1  TAGCTCCTTCATTGGGGGCCCTGTGTT-CCATCCAATAGATGACTGTGAG  98
      |||||||| ||| ||||||||| |||| ||||||||||||||||||||||
seq2  TAGCTCCTCCATGGGGGGCCCTTTGTTCCCATCCAATAGATGACTGTGAG  100

seq1  CATCCACTTCTGTATTTTCCAGGCACTGGCATAGCCTCACAGGAGACAGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACTTCTGTATTTTCCAGGCACTGGCATAGCCTCACAGGAGACAGC  150

seq1  TATATCAGGGTCCTGTCAGCACAATCTTGTTGGTATATGCAATAGTGT  196
      ||||||||||||||||||| | |||||||||||| ||||||| |||||
seq2  TATATCAGGGTCCTGTCAGGAAAATCTTGTTGGTGTATGCAA-AGTGT  197