BAC Information

Click to search

BAC

Clone NameB6Ng01-165F10
Chromosome9 (Build37)
Map Location 19,799,693 - 19,969,525
singlet/doubletdoublet
Overlap geneOlfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869
Upstream geneOlfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1
Downstream geneOlfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560, 4921534A09Rik, EG624824, Zfp26, Zfp426, 5730601F06Rik, 7030419G21Rik, LOC100041205, 2210010B09Rik, 5730577I03Rik, Fbxl12, Ubl5, Pin1, Olfm2, Col5a3, Rdh8, A230050P20Rik, Angptl6, Ppan, Eif3s4, Dnmt1, Edg5, Mrpl4, Icam1, Icam4, Icam5, Glp1, B230118G17Rik, Raver1, Tyk2, Cdc37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165F10.bB6Ng01-165F10.g
ACCDH957423DH957424
length1,120677
definitionDH957423|Mus musculus domesticus DNA, BAC clone: B6Ng01-165F10, 5' end.DH957424|Mus musculus domesticus DNA, BAC clone: B6Ng01-165F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,968,410 - 19,969,525)(19,799,693 - 19,800,369)
sequence
gaattccacaggaagacaaacagagtcaactactctggacccttggggga
tctcagagactgaaccaccaacgaaagagcatgtaccatctggaactagc
ccccctcccatacatatgcagtagatatgcagtcaagtcttcatgtgagt
ctcccagcaactggagtgggaacaatccctaaagctgttctatatctgta
gaatctgctcccctggccgggatgccttgtctggctcagtgggagagaat
gcacctgcaaagacatgatgtgccgtggtgagagcatacacagaggaagc
ttctctcagaggagaaaagggcaagggaattgtggggaggaaaaggagta
gggagcaataaccaagataataaataaataaataaataaataaataaata
aataaataaataaatatgagagcttgcctccagggagttttctgacccca
ggacttgggtctctctaaggtgggtccactcaggagagagctgtggggag
gaaaaggagtagggagcaataaccaagataataaataaataaataaataa
ataaatgaatgaataaataaataaataaataaataaatatgagagcttgc
ctccagggagttttctgaccccaggaccttgggtctctctaaggtgggtc
cactcaggagagagcacaggctgcagaagcagttgagcagctgggacagg
gtcctaagggcctacatctgcagccaggaggaggggctcttccacagccc
actgtgtactggacttcccaggagagagcttgtctcacaagaatgctgac
acaggcttacagactcacaggaggaacaagctccagccagagacagctag
aacatctaacaccagagattaccagatggcaaaaggcaaatgtaggaatc
ttaccaacagaaaccaagactacttggcatcaccagaacccagtactccc
accacagtgagtcctgggacatcccgaaacagagaaaaccgacattagta
ttaaagtcatatcctcggtgatgctggtaggggattttagagggaaatta
ataaattcttttaaggaatacggggtactaggctaacagttaagaatcgt
taaagaggaaacaaaaaaac
gaattctagaatttgagggcatggcagaaattgaactacatagccagaaa
tcataggaaaatagaagacaaaattgaatgtatattgaaactttacccag
gacttccaagtatcaaactgtattttctttgagcatgtacatttatatat
gtccaattattttcctataaaacatataaacagtatcatcatgttaaatt
gaattgagaagtattttatgtaactattgtaatttattttaatatttgag
attttaatttaattccaacacttctcgtttgcttttcatcccttcaaacc
ctcaaataaaatcttcttcatattaaagtgtcattgttcatgagttattc
tgctttgtattatcatcaaaatgtccaagacagttaagctttttgagaaa
aggagtttatgtacatcacagatttgtattctacaaattcaaaggctttg
atgatgatctctttgtgaatggcagaaatgaaaatgtattgaagaggaag
tcataatatattataagatgaatccagagtctggagtctctcaatctcta
aaagtggccaccttaacgggacgtcccctgagatgccttctcttttcttt
tatgtcttttctgttctgaactgttctgttctttcttttcctctcttctc
ttctcttctcttctcttctcttctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19968410_19969525
seq2: B6Ng01-165F10.b_53_1167 (reverse)

seq1  GTTTTTTTGTTTCCTCTTTAAGGATTTCTAACTGTTTAGCTATGTTCTCC  50
      ||||||||||||||||||||| ||||  |||||| |||||   || | ||
seq2  GTTTTTTTGTTTCCTCTTTAACGATTCTTAACTG-TTAGCCTAGTAC-CC  48

seq1  TGTATTTCTTTAAATGAATTATTAATTTCCTTCTTAAATTCCCCTACCAG  100
       ||||| ||| |||  | |||||||||||| || |||| |||||||||||
seq2  CGTATTCCTTAAAAGAATTTATTAATTTCCCTC-TAAAATCCCCTACCAG  97

seq1  CATCA-CGA-GATATGACTTTAATACTAATGTCGGTTTTCCTCTGTTTCG  148
      ||||| ||| ||||||||||||||||||||||||||||| ||||||||||
seq2  CATCACCGAGGATATGACTTTAATACTAATGTCGGTTTT-CTCTGTTTCG  146

seq1  GGATGT-CCAGGACTCACTGTGGTGGGAGTACTGGGTTCTGGTGATGCCA  197
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCCCAGGACTCACTGTGGTGGGAGTACTGGGTTCTGGTGATGCCA  196

seq1  AGTAGTCTTGGTTTCTGTTGGTAAGATTCCTACATTTGCCTTTTGCCATC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCTTGGTTTCTGTTGGTAAGATTCCTACATTTGCCTTTTGCCATC  246

seq1  TGGTAATCTCTGGTGTTAGATGTTCTAGCTGTCTCTGGCTGGAGCTTGTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATCTCTGGTGTTAGATGTTCTAGCTGTCTCTGGCTGGAGCTTGTT  296

seq1  CCTCCTGTGAGTCTGTAAGCCTGTGTCAGCATTCTTGTGAGACAAGCTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTGAGTCTGTAAGCCTGTGTCAGCATTCTTGTGAGACAAGCTCT  346

seq1  CTCCTGGGAAGTCCAGTACACAGTGGGCTGTGGAAGAGCCCCTCCTCCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGAAGTCCAGTACACAGTGGGCTGTGGAAGAGCCCCTCCTCCTG  396

seq1  GCTGCAGATGTAGGCCCTTAGGACCCTGTCCCAGCTGCTCAACTGCTTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGATGTAGGCCCTTAGGACCCTGTCCCAGCTGCTCAACTGCTTCT  446

seq1  GCAGCCTGTGCTCTCTCCTGAGTGGACCCACCTTAGAGAGACCCAAGGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGTGCTCTCTCCTGAGTGGACCCACCTTAGAGAGACCCAAGGTC  496

seq1  CTGGGGTCAGAAAACTCCCTGGAGGCAAGCTCTCATATTTATTTATTTAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTCAGAAAACTCCCTGGAGGCAAGCTCTCATATTTATTTATTTAT  546

seq1  TTATTTATTTATTCATTCATTTATTTATTTATTTATTTATTTATTATCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTCATTCATTTATTTATTTATTTATTTATTTATTATCTT  596

seq1  GGTTATTGCTCCCTACTCCTTTTCCTCCCCACAGCTCTCTCCTGAGTGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTGCTCCCTACTCCTTTTCCTCCCCACAGCTCTCTCCTGAGTGGA  646

seq1  CCCACCTTAGAGAGACCCAAGTCCTGGGGTCAGAAAACTCCCTGGAGGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTAGAGAGACCCAAGTCCTGGGGTCAGAAAACTCCCTGGAGGCA  696

seq1  AGCTCTCATATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCATATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA  746

seq1  TTTATTATCTTGGTTATTGCTCCCTACTCCTTTTCCTCCCCACAATTCCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATCTTGGTTATTGCTCCCTACTCCTTTTCCTCCCCACAATTCCC  796

seq1  TTGCCCTTTTCTCCTCTGAGAGAAGCTTCCTCTGTGTATGCTCTCACCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTTTCTCCTCTGAGAGAAGCTTCCTCTGTGTATGCTCTCACCAC  846

seq1  GGCACATCATGTCTTTGCAGGTGCATTCTCTCCCACTGAGCCAGACAAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCATGTCTTTGCAGGTGCATTCTCTCCCACTGAGCCAGACAAGG  896

seq1  CATCCCGGCCAGGGGAGCAGATTCTACAGATATAGAACAGCTTTAGGGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCGGCCAGGGGAGCAGATTCTACAGATATAGAACAGCTTTAGGGAT  946

seq1  TGTTCCCACTCCAGTTGCTGGGAGACTCACATGAAGACTTGACTGCATAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCACTCCAGTTGCTGGGAGACTCACATGAAGACTTGACTGCATAT  996

seq1  CTACTGCATATGTATGGGAGGGGGGCTAGTTCCAGATGGTACATGCTCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCATATGTATGGGAGGGGGGCTAGTTCCAGATGGTACATGCTCTT  1046

seq1  TCGTTGGTGGTTCAGTCTCTGAGATCCCCCAAGGGTCCAGAGTAGTTGAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTGGTGGTTCAGTCTCTGAGATCCCCCAAGGGTCCAGAGTAGTTGAC  1096

seq1  TCTGTTTGTCTTCCTGTGG  1116
      |||||||||||||||||||
seq2  TCTGTTTGTCTTCCTGTGG  1115

seq1: chr9_19799693_19800369
seq2: B6Ng01-165F10.g_70_746

seq1  GAATTCTAGAATTTGAGGGCATGGCAGAAATTGAACTACATAGCCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAATTTGAGGGCATGGCAGAAATTGAACTACATAGCCAGAAA  50

seq1  TCATAGGAAAATAGAAGACAAAATTGAATGTATATTGAAACTTTACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGAAAATAGAAGACAAAATTGAATGTATATTGAAACTTTACCCAG  100

seq1  GACTTCCAAGTATCAAACTGTATTTTCTTTGAGCATGTACATTTATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCAAGTATCAAACTGTATTTTCTTTGAGCATGTACATTTATATAT  150

seq1  GTCCAATTATTTTCCTATAAAACATATAAACAGTATCATCATGTTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATTATTTTCCTATAAAACATATAAACAGTATCATCATGTTAAATT  200

seq1  GAATTGAGAAGTATTTTATGTAACTATTGTAATTTATTTTAATATTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAGAAGTATTTTATGTAACTATTGTAATTTATTTTAATATTTGAG  250

seq1  ATTTTAATTTAATTCCAACACTTCTCGTTTGCTTTTCATCCCTTCAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTAATTCCAACACTTCTCGTTTGCTTTTCATCCCTTCAAACC  300

seq1  CTCAAATAAAATCTTCTTCATATTAAAGTGTCATTGTTCATGAGTTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATAAAATCTTCTTCATATTAAAGTGTCATTGTTCATGAGTTATTC  350

seq1  TGCTTTGTATTATCATCAAAATGTCCAAGACAGTTAAGCTTTTTGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTATTATCATCAAAATGTCCAAGACAGTTAAGCTTTTTGAGAAA  400

seq1  AGGAGTTTATGTACATCACAGATTTGTATTCTACAAATTCAAAGGCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTATGTACATCACAGATTTGTATTCTACAAATTCAAAGGCTTTG  450

seq1  ATGATGATCTCTTTGTGAATGGCAGAAATGAAAATGTATTGAAGAGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGATCTCTTTGTGAATGGCAGAAATGAAAATGTATTGAAGAGGAAG  500

seq1  TCATAATATATTATAAGATGAATCCAGAGTCTGGAGTCTCTCAATCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATATATTATAAGATGAATCCAGAGTCTGGAGTCTCTCAATCTCTA  550

seq1  AAAGTGGCCACCTTAACGGGACGTCCCCTGAGATGCCTTCTCTTTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGCCACCTTAACGGGACGTCCCCTGAGATGCCTTCTCTTTTCTTT  600

seq1  TATGTCTTTTCTGTTCTGAACTGTTCTGTTCTTTCTTTTCCTCTCTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTTTCTGTTCTGAACTGTTCTGTTCTTTCTTTTCCTCTCTTCTC  650

seq1  TTCTCTTCTCTTCTCTTCTCTTCTCTT  677
      |||||||||||||||||||||||||||
seq2  TTCTCTTCTCTTCTCTTCTCTTCTCTT  677