BAC Information

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BAC

Clone NameB6Ng01-169I16
Chromosome9 (Build37)
Map Location 74,229,305 - 74,230,426
singlet/doubletsinglet
Overlap genenone
Upstream geneUnc13c, Wdr72, Nr1h2-ps
Downstream geneLOC100040764, Onecut1, BC031353, Arpp19, LOC100040812, Myo5a, LOC677501, Myo5c, Gnb5, Bcl2l10, LOC384954
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169I16.bB6Ng01-169I16.g
ACCDH960493DH960494
length1,106864
definitionDH960493|Mus musculus domesticus DNA, BAC clone: B6Ng01-169I16, 5' end.DH960494|Mus musculus domesticus DNA, BAC clone: B6Ng01-169I16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagcggactggctaggagtcattcttctgtgaggtggataagaa
agatatttcaagtaccattaactacttctaatctaagctctattaaattt
aaagcctgtagtaattatactgagagctggggtggggagttttgttttat
ttttgctgcctttgaagggaaaaaaaatgagcttcggttacaatagcatc
aataagagacatatttaaattcagcctcagttggtttggtggtatgtaca
tgtaatcctgaagctttgaatactaatgtgggagaatcataaattccagg
acagctttggatatatagcaaagccttgtctccaaaaaccaaagccatcg
accaaccaaacaatgactgtgtgtttgttttaaggatgttggcaggagag
atagcacggtgtttcaccaactccatctgtgtgataagccaatagatgtc
ccagctgacagctaagggaataatcattggcaggagcaagtccaatggca
ccagctccaaactcttgttttcctgttcatgctgacttgcaggcatcccc
ggacttctgtgtctctatgacagtctgatgaagaatgagacacggacaca
ctcaaaatgttgctgtgctattcagtgctcatcatcagcttgacaggatc
cataatggcctgggaagtgggccccgggacatacctgtgggagcttatga
tgatgatgttaattatatgaagagatccactcctatggatagctcatctc
tgtgatcctgggttaagtagagggagggagctgagcagaagtaaaccttt
gctctctgcttgctgactgtagatacaatgtgaccagtggcctccagctt
ctgcttcttggacttccccctcagggttgactattcagccctgagctaaa
ttgccttctcttctttaagttactttttatcatagcatcagaaaagtaat
taagatctttgtattgacttcaagcctctctcaagtgagaactcctgccc
aagtgtcttctcatataataaactctttcatcttaataataacaggtatc
tacaaactgtttgctggccatggaatattacggactgcagattggaagag
catacc

gaattctagaaagtctttaatttttctctttatttcttccttgacctagt
agtcattgagtagagggttgttcggttttcatgagtttgtaggctttctt
gttgttgaatttcagctttaatccagaggggtctgataagatacagggag
ttatttcaattttcttgtatcttttgagacttgcttcatgtatttggtca
atcttggagaagggtcatgaggtgctaggaagaaggtatattctttcatg
tttgggtgaagtgttctaccgatatgtgtaaggttcatttgagtcattac
atctgttaattacattatttctctgtttagtttctgtctgtctgacctgt
ccattgatgagagtggggtgttgaagtttcccactattaatgtgtagggt
tcaatgtgtgatttaaactttagtaatagatcttttgcaaaagtaagtgc
ctttccatttggggcataaatattcagaatgagaaatcatcttggcctat
ttttcctcttatgcttatgaattgtccttcctatctcttttgattaattt
tggctggaagtctattttattagatattagaatggctactcagggttgct
tcttgagtctgtttggttggaaaatatttttccagccctttactctgaga
caatgtctatctttaatgcagctgtatgtttcttgtatgcaacagataat
gggtcctggttttagatccattctgttagcctgtgtctttttattggaga
ttgagtccattgatgttgagagatattaatgataagcgataataaaaata
aattaattcttgttattttgctgttgctgtttgttgttggtagtagtgtt
gtttgttgttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_74229305_74230426
seq2: B6Ng01-169I16.b_43_1148

seq1  GAATTCTAGCGGACTGGCTAGGAGTCATTCTTCTGTGAGGTGGATAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCGGACTGGCTAGGAGTCATTCTTCTGTGAGGTGGATAAGAA  50

seq1  AGATATTTCAAGTACCATTAACTACTTCTAATCTAAGCTCTATTAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTCAAGTACCATTAACTACTTCTAATCTAAGCTCTATTAAATTT  100

seq1  AAAGCCTGTAGTAATTATACTGAGAGCTGGGGTGGGGAGTTTTGTTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTGTAGTAATTATACTGAGAGCTGGGGTGGGGAGTTTTGTTTTAT  150

seq1  TTTTGCTGCCTTTGAAGGGAAAAAAAATGAGCTTCGGTTACAATAGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGCCTTTGAAGGGAAAAAAAATGAGCTTCGGTTACAATAGCATC  200

seq1  AATAAGAGACATATTTAAATTCAGCCTCAGTTGGTTTGGTGGTATGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAGACATATTTAAATTCAGCCTCAGTTGGTTTGGTGGTATGTACA  250

seq1  TGTAATCCTGAAGCTTTGAATACTAATGTGGGAGAATCATAAATTCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCCTGAAGCTTTGAATACTAATGTGGGAGAATCATAAATTCCAGG  300

seq1  ACAGCTTTGGATATATAGCAAAGCCTTGTCTCCAAAAACCAAAGCCATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTGGATATATAGCAAAGCCTTGTCTCCAAAAACCAAAGCCATCG  350

seq1  ACCAACCAAACAATGACTGTGTGTTTGTTTTAAGGATGTTGGCAGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAAACAATGACTGTGTGTTTGTTTTAAGGATGTTGGCAGGAGAG  400

seq1  ATAGCACGGTGTTTCACCAACTCCATCTGTGTGATAAGCCAATAGATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACGGTGTTTCACCAACTCCATCTGTGTGATAAGCCAATAGATGTC  450

seq1  CCAGCTGACAGCTAAGGGAATAATCATTGGCAGGAGCAAGTCCAATGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGACAGCTAAGGGAATAATCATTGGCAGGAGCAAGTCCAATGGCA  500

seq1  CCAGCTCCAAACTCTTGTTTTCCTGTTCATGCTGACTTGCAGGCATCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCCAAACTCTTGTTTTCCTGTTCATGCTGACTTGCAGGCATCCCC  550

seq1  GGACTTCTGTGTCTCTATGACAGTCTGATGAAGAATGAGACACGGACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCTGTGTCTCTATGACAGTCTGATGAAGAATGAGACACGGACACA  600

seq1  CTCAAAATGTTGCTGTGCTATTCAGTGCTCATCATCAGCTTGACAGGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATGTTGCTGTGCTATTCAGTGCTCATCATCAGCTTGACAGGATC  650

seq1  CATAATGGCCTGGGAAGTGGGCCCCGGGACATACCTGTGGGAGCTTATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGGCCTGGGAAGTGGGCCCCGGGACATACCTGTGGGAGCTTATGA  700

seq1  TGATGATGTTAATTATATGAAGAGATCCACTCCTATGGATAGCTCATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATGTTAATTATATGAAGAGATCCACTCCTATGGATAGCTCATCTC  750

seq1  TGTGATCCTGGGTTAAGTAGAGGGAGGGAGCTGAGCAGAAGTAAACCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCTGGGTTAAGTAGAGGGAGGGAGCTGAGCAGAAGTAAACCTTT  800

seq1  GCTCTCTGCTTGCTGACTGTAGATACAATGTGACCAGTGGCCTCCAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGCTTGCTGACTGTAGATACAATGTGACCAGTGGCCTCCAGCTT  850

seq1  CTGCTTCTTGGACTTCCCCCTCAGGGTTGACTATTCAGCCCTGAGCTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTGGACTTCCCCCTCAGGGTTGACTATTCAGCCCTGAGCTAAA  900

seq1  TTGCCTTCTCTTCTTTAAGTTACTTTTTATCATAGCATCAGGAAAAGTAA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGCCTTCTCTTCTTTAAGTTACTTTTTATCATAGCATCA-GAAAAGTAA  949

seq1  TTAAGATCTTTGTATTGACTTCAAGCCTCTCTTCAAGTGAGAACTCCTGC  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTAAGATCTTTGTATTGACTTCAAGCCTCTC-TCAAGTGAGAACTCCTGC  998

seq1  CCAAGTGTCTTCTCATATAATAAACTTCTTTCCATCTTTTAATAATAACA  1050
      ||||||||||||||||||||||||| ||||| ||||  ||||||||||||
seq2  CCAAGTGTCTTCTCATATAATAAAC-TCTTT-CATC--TTAATAATAACA  1044

seq1  GGTTATCCTACCAAAACTGTTTTGCTGGCCAATGAATATTTTAGCGGACT  1100
      || ||| ||||  |||||| |||||||||||  |||||||    ||||||
seq2  GG-TAT-CTAC--AAACTG-TTTGCTGGCCATGGAATATT---ACGGACT  1086

seq1  GCAGATTTGAAAGTAGCATACC  1122
      ||||||| |||   ||||||||
seq2  GCAGATTGGAA--GAGCATACC  1106


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