MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-170G06
Chromosome	9 (Build37)
Map Location	82,375,393 - 82,375,686
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039038, Htr1b, LOC671392, 4930486G11Rik, LOC100039085
Downstream gene	Irak1bp1, Phip, LOC100039144, Hmgn3, LOC100039159, 4930431B11Rik, EG619900, LOC100039186
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Htr1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15551 MGI:96274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 246 ESTs, 17 Proteins

name	4930486G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75033 MGI:1922283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Irak1bp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65099 MGI:1929475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83946 MGI:1932404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Hmgn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94353 MGI:2138069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins

name	4930431B11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75782 MGI:1923032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG619900 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619900 MGI:3643614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 717 ESTs, 17 Proteins

name	LOC100039186 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039038 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260104 GeneID:100039038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100039038 transcript_id : XM_001472137.1

name	Htr1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754257 GeneID:15551 MGI:96274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 1B transcript_id : NM_010482.1

name	LOC671392 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260100 GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 245 ESTs, 17 Proteins product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 1 transcript_id : XM_001472004.1

name	LOC671392 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260102 GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 170 ESTs, 1 Protein product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 2 transcript_id : XM_001472036.1

name	4930486G11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803039 GeneID:75033 MGI:1922283
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930486G11 gene transcript_id : NM_175213.3

name	Irak1bp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367357 GeneID:65099 MGI:1929475
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin-1 receptor-associated kinase 1 binding protein 1 transcript_id : NM_022986.3

name	Phip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487034 GeneID:83946 MGI:1932404
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain interacting protein transcript_id : NM_001081216.1

name	LOC100039144 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260106 GeneID:100039144
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100039144 transcript_id : XM_001472344.1

name	Hmgn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281865 GeneID:94353 MGI:2138069
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group nucleosomal binding domain 3 transcript_id : NM_175074.1

name	Hmgn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381310 GeneID:94353 MGI:2138069
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group nucleosomal binding domain 3 transcript_id : NM_026122.2

name	LOC100039159 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260108 GeneID:100039159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins product : similar to Ubtf protein transcript_id : XM_001472364.1

name	4930431B11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366770 GeneID:75782 MGI:1923032
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930431B11 gene transcript_id : NM_029434.2

name	4930431B11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299756 GeneID:75782 MGI:1923032
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930431B11 gene transcript_id : NM_027448.1

name	EG619900 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386273 GeneID:619900 MGI:3643614
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 717 ESTs, 17 Proteins product : predicted gene, EG619900 transcript_id : XM_884518.2

name	LOC100039038 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260105 GeneID:100039038
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472187.1

name	Htr1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754258 CCDS:CCDS23370.1 GeneID:15551 MGI:96274
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : 5-HT1B receptor; 5-HT<1B> receptor product : 5-hydroxytryptamine (serotonin) receptor 1B protein_id : NP_034612.1

name	LOC671392 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260101 GeneID:671392
definition	codon_start : 1 product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 1 protein_id : XP_001472054.1

name	LOC671392 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260103 GeneID:671392
definition	codon_start : 1 product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 2 protein_id : XP_001472086.1

name	4930486G11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424840 CCDS:CCDS23371.1 GeneID:75033 MGI:1922283
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC75033 protein_id : NP_780422.1

name	Irak1bp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560281 CCDS:CCDS23372.1 GeneID:65099 MGI:1929475
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007249 - I-kappaB kinase/NF-kappaB cascade [Evidence IDA] codon_start : 1 exception : mismatches in translation note : ActA binding protein 3 product : interleukin-1 receptor-associated kinase 1 binding protein 1 protein_id : NP_075362.2

name	Phip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487035 GeneID:83946 MGI:1932404
definition	GO_function : GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0008286 - insulin receptor signaling pathway [Evidence IDA] codon_start : 1 note : neuronal differentiation related protein; WD repeat domain 11 product : pleckstrin homology domain interacting protein protein_id : NP_001074685.1

name	LOC100039144 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260107 GeneID:100039144
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472394.1

name	Hmgn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313298 GeneID:94353 MGI:2138069
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence ISS] [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform HMGN3a is encoded by transcript variant 1 product : high mobility group nucleosomal binding domain 3 isoform HMGN3a protein_id : NP_080398.1

name	Hmgn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281866 GeneID:94353 MGI:2138069
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence ISS] [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform HMGN3b is encoded by transcript variant 2 product : high mobility group nucleosomal binding domain 3 isoform HMGN3b protein_id : NP_778249.1

name	LOC100039159 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260109 GeneID:100039159
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472414.1

name	4930431B11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21624625 CCDS:CCDS23373.1 GeneID:75782 MGI:1923032
definition	codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : hypothetical protein LOC75782 isoform a protein_id : NP_083710.1

name	4930431B11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68299757 CCDS:CCDS23374.1 GeneID:75782 MGI:1923032
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : hypothetical protein LOC75782 isoform b protein_id : NP_081724.1

name	EG619900 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930467 GeneID:619900 MGI:3643614
definition	codon_start : 1 product : similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) protein_id : XP_889611.1

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 4 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 3 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 2 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 1 pseudo : _no_value

name	LOC100039186 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039186
definition	number : 1 pseudo : _no_value

name	LOC100039186 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039186
definition	number : 2 pseudo : _no_value

clone name	MSMg01-158P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321K23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-196L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513E07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344G01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-170G06.b	B6Ng01-170G06.g
ACC	DH961113	DH961114
length	1,127	294
definition	DH961113\|Mus musculus domesticus DNA, BAC clone: B6Ng01-170G06, 5' end.	DH961114\|Mus musculus domesticus DNA, BAC clone: B6Ng01-170G06, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacattgatggattttcgtatattaaacc atccctgcatccctggaataaaacctacctggtcaggatggatgattgct ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc atcgatgttcataagagaaattggtctgaagttctctatctttgttggat ctttctgtggtttaggtatcagagtaatagtggcttcataaaagagttgg gtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgga gttagatcttctttgaaggtctgatagaactctgcactaaacccgtctgg tcctgggctttttttggctgggagactattaataactgcttctatttctt taggggatatgggactgtttagaaggtcaacttgatcctgattcaacttt ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt cttcaggatctgttgttatgtctcccttttcatttctgattttgttaatt aggattttgtccctgtgccctttagtgactctagctaagggtttatctat cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa tagttcttcttgtttccacttggttgatttcacccctgagtttgattatt tcctgccgtctactcctcttgggtgaatttgcttcctttttttctagagc ttttagatgtgttgtcaagctgctagtatgtgctctctcccgttttttct gaagcactcatagctatgagtttccctctagaaatgctttattgtgtccc aaaggttgggtacgttgtggcttcatttcattaactcttaaaagtcttaa tttctttcttattcctcccttgagtccaaggatcatgaggagaagagatg tgtcacgttccagggagagagttggcc	agttaggagaactgatatatgaatcagagaccatgaataaatcttaggaa ttattgatatagtgatcaaaatcagattatgatgacaaaaactagttata aatatcagctgagaatatggaaagtggatctgtgaggtagaacattggcc aaagagtaagaaattaaggcaaatggtcggtaatatttaccttctaaatg gagacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta aacacgtcttacaaaactaggagagcagggtcacaaattactaa
quality values	Open. Hide. 53 42 21 33 61 53 52 39 61 38 43 61 61 61 61 61 38 14 61 61 61 61 61 61 61 14 21 10 11 6 11 9 9 13 27 36 28 41 47 47 61 61 61 61 47 47 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 19 33 32 22 23 26 21 19 31 49 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 52 52 34 31 55 52 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 43 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 42 53 61 61 61 61 61 47 61 61 53 61 43 61 61 61 61 37 61 35 61 52 61 61 61 61 61 61 61 61 61 61 61 61 35 61 53 42 61 61 61 61 61 61 53 45 47 47 46 52 61 61 61 61 52 61 61 52 43 45 35 38 40 57 57 50 42 57 57 53 53 45 53 50 53 57 57 50 50 53 52 47 30 52 53 47 57 53 57 45 47 26 47 47 57 57 57 52 47 47 57 53 38 50 45 52 47 50 53 53 50 53 57 57 47 50 57 32 57 53 22 57 30 30 43 52 57 52 30 57 37 26 43 33 57 57 57 52 47 40 39 52 41 45 45 53 39 25 33 57 47 39 52 53 57 24 52 52 14 52 52 52 53 37 41 47 39 57 53 43 41 41 53 42 27 24 57 52 52 50 38 52 22 57 57 41 32 36 34 39 50 42 50 40 23 40 50 21 57 57 37 53 34 41 35 53 34 52 37 37 36 46 53 42 57 53 52 37 41 42 42 32 50 50 37 47 33 42 42 29 35 7 38 31 18 57 52 37 37 36 40 37 42 53 33 40 34 15 37 36 42 33 57 52 44 37 31 40 21 57 48 27 40 40 21 43 26 37 41 53 37 53 41 53 29 16 57 53 53 41 16 37 31 40 24 30 44 24 51 41 31 38 38 34 39 25 25 29 48 29 33 34 31 33 30 24 36 34 29 36 19 31 26 38 30 51 16 39 30 29 13 51 33 35 28 30 51 51 46 29 33 39 17 29 45 33 28 29 16 28 44 28 51 36 33 39 26 30 22 46 28 16 41 29 28 28 28 41 39 28 35 30 28 43 51 43 21 29 24 38 34 51 29 21 28 21 36 29 33 26 51 46 51 41 46 33 27 20 41 29 31 23 29 28 51 46 27 22 9 41 23 31 20 28 19 33 32 11 24 28 28 29 30 28 28 23 20 34 20 13 9 10 23 25 20 12 16 16 11 10 19 17 34 17 19 20 31 51 38 38 19 17 18 5 17 20 6 5 14 21 28 22 18 22 34 17 26 29 14 17 15 34 11 29 20 16 14 26 13 16 9 32 11 9 30 39 33 8 12 14 16 16 13 7 6 6 7 5 11 15 25 39 14 21 44 21 14 23 13 11 5 30 27 8 14 29 7 21 7 6 6 6 29 12 29 23 15 9 29 37 23 6 5 21 6 5 9 5 12 4 5 9 17 34 37 5 5 5 10 6 29 8 12 25 30 20 10 16 29 27 16 20 26 5 9 5 5 16 10 5 13 23 15 19 9 5 7 3 7 5 6 5 12 7 7 2 1 4 13 5 5 5 5 7 6 24 5 6 9 7 5 5 6 4 5 16 5 5 9 9 5 10 16 12 4 6 7 4 4 4 5 5 5 10 5 6 5 5 4 4	Open. Hide. 12 13 10 10 12 12 13 18 12 18 28 35 43 59 59 61 61 61 61 59 61 61 61 61 59 59 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 39 28 36 13 28 28 26 36 36 39 59 44 55 59 59 61 61 61 61 55 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 59 61 61 61 61 61 61 61 61 52 31 29 32 38 43 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 55 61 59 61 61 61 59 55 55 59 61 61 59 59 61 59 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 55 44 55 55 59 59 59 61 59 44 55 59 59 33 27 13 25 14 19 34 19 28 13 12 12 12 20 20 19 13 18 12 12 27 12 12 11 8 10 23 29 23 26 10 12 11 10 22 21 12 12 18 13 12 9 24 12 8 12 12 13 12 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_82375393_82375686
seq2: B6Ng01-170G06.g_72_365 (reverse)

seq1  TTAGTAATCTGTGACCCTACTCTCCTTGTTTTGTAATACTTGTTTACACA  50
      |||||||| ||||||||| ||||||| ||||||||| || ||||||||||
seq2  TTAGTAATTTGTGACCCTGCTCTCCTAGTTTTGTAAGACGTGTTTACACA  50

seq1  CACACACACACACACACACACACACACACACACACACAGGTCTCCATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACAGGTCTCCATTTA  100

seq1  GAAGGTAAATATTACCGACCATTTGCCTTAATTTCTTACTCTTTGGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAAATATTACCGACCATTTGCCTTAATTTCTTACTCTTTGGCCAA  150

seq1  TGTTCTACCTCACAGATCCACTTTCCATATTCTCAGCTGATATTTATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTACCTCACAGATCCACTTTCCATATTCTCAGCTGATATTTATAAC  200

seq1  TAGTTTTTGTCATCATAATCTGATTTTGATCACTATATCAATAATTCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTGTCATCATAATCTGATTTTGATCACTATATCAATAATTCCTA  250

seq1  AGATTTATTCATGGTCTCTGATTCATATATCAGTTCTCCTAACT  294
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTCATGGTCTCTGATTCATATATCAGTTCTCCTAACT  294

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information