MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-178A08
Chromosome	9 (Build37)
Map Location	47,324,240 - 47,487,049
singlet/doublet	doublet
Overlap gene	Cadm1
Upstream gene	EG667890, 2900052N01Rik, D930036J05
Downstream gene	LOC100043303, D930028F11Rik, 4432416J03Rik, EG640268, EG434401, LOC667933, Rexo2, Rbm7, EG434402, Nnmt, Zbtb16
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG667890 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667890 MGI:3644829
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	2900052N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D930036J05 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Cadm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	LOC100043303 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	D930028F11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244853 MGI:1924792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4432416J03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78252 MGI:1925502
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG640268 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:640268 MGI:3646632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	EG434401 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434401 MGI:3646416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 449 ESTs, 5 Proteins

name	LOC667933 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Rexo2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104444 MGI:1888981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67010 MGI:1914260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434402 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434402 MGI:3643566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 106 ESTs, 2 Proteins

name	Nnmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18113 MGI:1099443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbtb16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235320 MGI:103222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D930036J05 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259953 GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein D930036J05 transcript_id : XM_001479857.1

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040101 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_207675.2

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040103 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_018770.3

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040105 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_207676.2

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040106 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_001025600.1

name	D930028F11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778977 GeneID:244853 MGI:1924792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D930028F11 gene transcript_id : NM_172921.2

name	4432416J03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357233 GeneID:78252 MGI:1925502
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4432416J03 gene transcript_id : NM_030069.2

name	EG640268 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259925 GeneID:640268 MGI:3646632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG640268 transcript_id : XM_001478763.1

name	EG434401 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259955 GeneID:434401 MGI:3646416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 449 ESTs, 5 Proteins product : predicted gene, EG434401 transcript_id : XM_486217.5

name	Rexo2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802136 GeneID:104444 MGI:1888981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : REX2, RNA exonuclease 2 homolog (S. cerevisiae) transcript_id : NM_024233.3

name	Rbm7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801547 GeneID:67010 MGI:1914260
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 7 transcript_id : NM_144948.3

name	EG434402 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259956 GeneID:434402 MGI:3643566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 106 ESTs, 2 Proteins product : predicted gene, EG434402 transcript_id : XM_001479948.1

name	Nnmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922620 GeneID:18113 MGI:1099443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nicotinamide N-methyltransferase transcript_id : NM_010924.2

name	Zbtb16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382613 GeneID:235320 MGI:103222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 16 transcript_id : NM_001033324.2

name	D930036J05 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259954 GeneID:215467
definition	codon_start : 1 product : similar to LRRGT00042 protein_id : XP_001479907.1

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040102 CCDS:CCDS23149.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform a protein_id : NP_997558.2

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040104 CCDS:CCDS23148.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform c is encoded by transcript variant 3; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform c protein_id : NP_061240.3

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575940 CCDS:CCDS23150.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform b protein_id : NP_997559.1

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040107 CCDS:CCDS23147.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform d is encoded by transcript variant 4; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform d protein_id : NP_001020771.1

name	4432416J03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313426 CCDS:CCDS23151.1 GeneID:78252 MGI:1925502
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC78252 protein_id : NP_084345.1

name	D930028F11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70778978 CCDS:CCDS23152.1 GeneID:244853 MGI:1924792
definition	codon_start : 1 product : hypothetical protein LOC244853 protein_id : NP_766509.2

name	EG640268 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259926 GeneID:640268 MGI:3646632
definition	codon_start : 1 product : similar to protein of unknown function protein_id : XP_001478813.1

name	EG434401 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930015 GeneID:434401 MGI:3646416
definition	codon_start : 1 product : similar to nuclear protein-NHP2-like protein protein_id : XP_486217.2

name	Rexo2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229283 CCDS:CCDS23154.1 GeneID:104444 MGI:1888981
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence ISS]; GO:0004527 - exonuclease activity [Evidence IEA] GO_process : GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolism [Evidence ISS] codon_start : 1 product : small fragment nuclease protein_id : NP_077195.2

name	Rbm7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753952 CCDS:CCDS23155.1 GeneID:67010 MGI:1914260
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0007126 - meiosis [Evidence IEA] codon_start : 1 product : RNA binding motif protein 7 protein_id : NP_659197.2

name	EG434402 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259957 GeneID:434402 MGI:3643566
definition	codon_start : 1 product : hypothetical protein LOC434402 protein_id : XP_001479998.1

name	Nnmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754866 CCDS:CCDS23157.1 GeneID:18113 MGI:1099443
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008112 - nicotinamide N-methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : nicotinamide N-methyltransferase protein_id : NP_035054.1

name	Zbtb16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794629 CCDS:CCDS23158.1 GeneID:235320 MGI:103222
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016607 - nuclear speck [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0017053 - transcriptional repressor complex [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0016566 - specific transcriptional repressor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IDA]; GO:0035116 - embryonic hindlimb morphogenesis [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0009880 - embryonic pattern specification [Evidence IMP]; GO:0035136 - forelimb morphogenesis [Evidence IMP]; GO:0035110 - leg morphogenesis [Evidence IMP]; GO:0048133 - male germ-line stem cell division [Evidence IMP]; GO:0001823 - mesonephros development [Evidence IDA]; GO:0030099 - myeloid cell differentiation [Evidence ISS]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045638 - negative regulation of myeloid cell differentiation [Evidence IDA]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IMP]; GO:0001501 - skeletal development [Evidence IMP] codon_start : 1 note : luxoid; Green's luxoid; zinc finger protein 145 product : zinc finger and BTB domain containing 16 protein_id : NP_001028496.1

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 2 pseudo : _no_value

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 1 pseudo : _no_value

name	LOC100043303 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043303
definition	number : 1 pseudo : _no_value

name	LOC667933 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667933
definition	number : 1 pseudo : _no_value

name	2900052N01Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149259924 GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 2900052N01 gene transcript_id : XR_035381.1

clone name	MSMg01-475O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422P16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-455B24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355E06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052P02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-178A08.b	B6Ng01-178A08.g
ACC	GA005129	GA005130
length	1,134	1,083
definition	B6Ng01-178A08.b	B6Ng01-178A08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(47,485,887 - 47,487,049)	(47,324,240 - 47,325,330)
sequence	gaattcattctgtagaccaggctggccttaactcacaaagattgacctgc ctgcctcctgaatactgggatgaaaggtgtgaggcaccatgtctggctct tctgatttttctttatggaaaaaggagtgaaaagtattgaggtgggtggc ggcctgtggggcacacaaaacaggttatagcaaagctgtcaactaaagtg tgcatttactttctaggttcatagtcacggtgagtttctttgcttgctgg attattttaaaccatgggacagaaaaggcctagtatttaacacacagtga agattatataaatatttaatctggttgcaatatctaaagttatcctagag gcacgagagactttaaaatgtcaggaaagatagtgtagccattataataa tctagtatgaagtaaagaggattttaaaaaatatgaaagccattgattaa gagtataggaaaagaacaatttattgtgcacctactatatctgaatcatc acgctagctattcttttaattagttctcatgaagttctgcattacattct catttctaactaagacactagggttggtgatgtagcttcatggctgaaca tgtgtttagcattcatggggcactgatttcacaccctagcactaccaaaa aaaataaaataaaataagacaaaacaaaacaaaattcagacaccgaagga caaatgaaatgtgagtttttcaaggtcacactgctaaacagcgaccagta gacatagtggtctctatttgggaccatgtggacacaggggtctctgccag tctggggcactaagcgtcacaacttggcaatcaagtacacaaaagcagag tgagggagacggatctccgaaaggtaggaggctgacgtggtcccactatc agcagtttctggaagtgctgaccaaagcactggagatggaagttcagaaa agacccctgacttgagggcttcgcagtagtcggggaattacagcccaaga gatgagagccttcacagcagagcaatgctgttgaaaaaagtcctgtgcca aaaacaaaaacaaaacaaagcaaacctgttcaaaatatggagatatacga gaagtatcaacatcctgataagaaacaactcagg	gaattcagaaaagaggagataccaagaagaatgaaggagacaaaatatat gctttcagatgtcacagacagccacccagaaagggaaatagcagctcata agacaatgctggtgtcccataacccgttcccagatgatcctgctgaaggc tgcaccaccaggattcgaaggattgggattgattattttggcagatctca gtgtggaacactccagggaaaaagtgttgcaacagggcacacctcccagg ctggggcggagaggcaacagctcttctgtcttctgccagtggtgtctggg cagctggcatcccctcctaccatgctgtgtgtttgcccaacttcaaagcc agggcagccatcaaagcaaagaaggaaacagagacaggattaactccccc gttccccaccccaacccctctttccatcaggaaacttctcttaccaaaat gttaactagcagtgcacactgtattaatatctacatgctgacagcagtaa ccaggaagaagttttcactctggtgctgagttatgatgtccccaggaaaa taggagacaagagatattagcctgtaccatggtggtgactcctatagaca gattaaacctacaggagggcaggagtgttgagtttaggttttgttttgta tttgaaaatcaagacctgagtctgtgacaaataagtctctgagaacctct tgggtctgcaacagtggaagacagccatacacgtatacatgaaggtagcc gtgcttcttcatatcagcctgggttatcctaacccagcccaagaaaaagg tgttaagaaaatagcgcttgtgtaaaggaagactttaagaatgggcttaa aaagcaaagctttttgcaagttactgcactttctgagtcccaattcctaa cacagttacggcagaatgaatgcaacatcttatacggaaaactggctcgt ggtggatgatcatacacattatgcctgtatttgtttctcgaagccacctc tatcaaatcactgcagaggaggagcctggtttgctactccaggctgaagt ggctctaagcaatgtcttcatttgtaggcctta
quality values	Open. Hide. 58 49 15 22 58 34 22 47 62 47 31 41 42 62 62 54 62 33 25 62 62 62 49 62 49 62 62 62 62 62 62 62 62 59 43 59 49 62 62 62 59 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 51 58 58 49 38 58 58 58 58 58 58 54 58 58 58 58 54 54 58 58 58 58 54 58 58 54 54 58 52 58 58 58 58 58 54 58 58 58 58 58 54 58 58 54 41 58 54 58 52 52 58 58 58 54 58 58 58 58 58 58 58 58 58 42 58 54 58 58 58 58 58 54 53 58 58 58 58 58 58 58 58 51 50 58 58 58 58 47 58 45 45 58 58 52 54 58 54 46 58 58 58 58 58 51 51 51 58 46 39 53 58 58 52 42 58 52 58 49 49 58 51 39 58 52 58 58 43 58 58 28 58 58 58 58 58 58 51 58 46 51 58 43 58 39 58 58 54 58 53 58 58 49 50 26 58 58 50 49 23 39 50 50 58 31 58 58 50 58 51 50 49 28 54 39 41 51 54 50 58 50 23 54 38 32 52 54 52 52 54 53 54 34 38 54 41 51 52 30 40 54 54 54 39 47 12 44 42 54 32 39 42 50 45 53 53 53 50 44 32 49 28 44 34 53 51 39 45 42 33 32 43 39 42 35 26 30 31 53 43 39 36 54 39 33 53 45 40 40 53 42 54 51 38 54 40 19 13 47 31 45 53 35 32 51 37 29 27 47 28 29 51 52 40 38 33 33 32 33 32 32 31 27 31 32 40 32 32 49 51 43 30 26 30 41 28 31 18 43 45 36 39 31 31 30 31 33 31 30 39 38 27 32 31 39 32 30 33 43 32 32 38 28 35 33 46 46 38 32 42 31 23 36 18 31 42 37 31 47 41 31 24 31 22 25 29 27 31 30 21 25 46 29 43 48 25 21 33 22 31 29 27 31 20 26 15 28 20 27 18 16 24 27 28 19 31 48 32 24 31 37 31 29 29 6 7 11 35 26 31 47 32 32 30 31 38 25 29 17 31 33 32 31 22 31 23 17 18 38 33 31 31 23 22 29 17 24 6 10 25 18 31 33 14 27 25 26 27 29 6 4 5 43 48 34 9 24 14 33 21 27 13 29 23 21 21 20 11 9 4 29 19 21 23 23 32 18 21 9 24 14 17 14 19 33 21 48 37 23 14 24 12 30 15 27 19 12 13 22 21 6 12 12 7 16 12 12 21 29 10 18 15 18 12 14 15 27 29 8 13 11 8 16 6 10 5 21 14 24 7 16 18 28 7 5 7 7 23 34 34 34 34 27 9 19 4 9 17 12 5 6 7 19 11 28 30 28 7 8 21 17 27 25 10 9 11 15 12 12 11 7 27 27 16 18 22 30 21 13 9 16 23 12 7 11 15 26 17 8 8 4 6 8 13 3 3 2 4 8 9 13 11 7 6 3 5 21 4 17 5 21 8 10 6 27 7 15 7 13 6 5 3 2 1 5 10 14 30 17 3 3 4 4 6 4 4 18 6	Open. Hide. 62 49 51 47 62 59 36 62 62 62 62 62 51 59 50 38 54 28 20 26 49 59 59 59 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 59 62 62 49 49 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 38 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 58 58 54 58 58 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 46 58 58 54 58 52 58 58 58 58 52 52 58 58 58 58 48 54 58 48 58 58 49 54 49 52 58 54 58 52 54 34 49 51 58 51 53 58 58 58 58 58 50 58 51 50 54 58 58 51 58 58 53 58 45 41 54 50 58 48 51 54 51 52 53 52 51 58 54 47 58 52 58 58 58 58 51 52 58 50 52 58 54 36 58 51 50 53 49 58 58 32 51 58 34 58 51 54 50 51 58 49 50 47 51 35 58 58 51 54 50 58 58 51 51 39 50 39 51 58 51 51 49 51 58 37 53 50 44 40 50 35 58 50 58 58 39 53 53 53 58 52 51 49 32 29 58 54 53 54 51 50 54 51 50 53 53 54 54 21 44 39 24 34 51 53 53 35 39 33 44 34 42 52 53 41 35 53 52 44 49 42 54 44 44 49 41 38 26 39 38 52 51 19 53 39 52 42 53 38 53 42 53 42 53 33 53 52 45 53 31 54 37 45 43 40 53 32 32 51 34 19 14 25 35 30 42 31 32 33 38 37 31 32 33 33 33 33 51 51 32 41 32 39 22 52 32 45 22 27 49 32 31 19 34 47 47 27 28 32 51 52 47 49 32 21 33 17 51 21 25 33 45 31 51 51 46 30 31 38 28 31 31 31 45 39 51 30 31 28 28 51 19 11 9 16 29 9 31 17 33 51 43 28 15 25 27 31 29 31 46 30 30 24 12 30 46 46 46 38 30 31 46 46 36 18 31 42 48 46 46 27 28 23 26 27 37 36 21 26 38 32 43 31 21 18 35 46 35 30 28 28 31 24 29 24 46 31 23 17 20 30 31 31 29 23 27 22 32 6 13 13 27 41 22 19 25 30 15 46 13 10 18 31 34 19 46 14 31 18 20 24 32 21 31 33 32 31 25 27 16 20 16 24 26 43 43 29 31 30 35 30 13 17 20 12 7 26 48 13 26 25 20 16 26 20 10 32 36 14 9 10 6 12 9 13 11 16 4 22 13 32 22 29 10 11 21 39 32 22 12 43 20 18 22 33 19 17 27 9 26 21 7 25 10 21 27 27 18 13 18 19 37 15 32 13 11 10 18 33 10 8 12 31 7 16 26 18 7 16 8 11 16 3 7 13 3 18 10 23 20 27 24 6 11 3 9 20 13 11 13 23 15 9 17 7 5 6 11 4 6 16 11 10 6 25 6 7 8 16 8 7 15 19 23 13 6 22 38 20 20 13 10 12 6 14 6 16 7 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_47485887_47487049
seq2: B6Ng01-178A08.b_31_1164 (reverse)

seq1  CCTGAGTTGGTTTTCCTTAATTTCAGGATGGTTGATAACTTCTCGTTATT  50
      |||||||||   || ||||   ||||||| |||||| |||||||||   |
seq2  CCTGAGTTG---TTTCTTA---TCAGGAT-GTTGAT-ACTTCTCGT--AT  40

seq1  ATCCTTCCATAATTTTTGGACAGGTTTTGCTTTTTGTTTTTGTTTTTTGT  100
      |||  ||||||  ||||| ||||| ||||||||    ||||||||||   
seq2  ATC--TCCATA--TTTTGAACAGG-TTTGCTTT---GTTTTGTTTTT--G  80

seq1  TTTTTGGCACAGGAACTTTTTTTTCACAGCATTTGCTCTGCTGTTGAAGG  150
      ||||||||||||||   ||||||  |||||| ||||||||||| ||||||
seq2  TTTTTGGCACAGGA--CTTTTTTCAACAGCA-TTGCTCTGCTG-TGAAGG  126

seq1  CTCTCATCTCCTTGGGCTGTAATTCCCCGACTACCTGCGAAGCCCTTCAA  200
      ||||||||| ||||||||||||||||||||||| ||||||||||| ||||
seq2  CTCTCATCT-CTTGGGCTGTAATTCCCCGACTA-CTGCGAAGCCC-TCAA  173

seq1  GTCAGGGGTCTTTTCCTGAACTTCCATCTCCAGTGCTTTGGTCAGCACTT  250
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTCAGGGGTCTTTT-CTGAACTTCCATCTCCAGTGCTTTGGTCAGCACTT  222

seq1  CCAGAAACTGCCTGATAGTGGGACCACGTCAGCCTCCTACCTTTCGGAGA  300
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACTG-CTGATAGTGGGACCACGTCAGCCTCCTACCTTTCGGAGA  271

seq1  TCCGTCTCCCTCACTCTGCTTTTGTGTACTTGATTGCCAAGTTGTGACGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCTCCCTCACTCTGCTTTTGTGTACTTGATTGCCAAGTTGTGACGC  321

seq1  TTAGTGCCCCAGACTGGCAGAGACCCCTGTGTCCACATGGTCCCAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCCCCAGACTGGCAGAGACCCCTGTGTCCACATGGTCCCAAATAG  371

seq1  AGACCACTATGTCTACTGGTCGCTGTTTAGCAGTGTGACCTTGAAAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACTATGTCTACTGGTCGCTGTTTAGCAGTGTGACCTTGAAAAACT  421

seq1  CACATTTCATTTGTCCTTCGGTGTCTGAATTTTGTTTTGTTTTGTCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCATTTGTCCTTCGGTGTCTGAATTTTGTTTTGTTTTGTCTTAT  471

seq1  TTTATTTTATTTTTTTTGGTAGTGCTAGGGTGTGAAATCAGTGCCCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTTTTTTTGGTAGTGCTAGGGTGTGAAATCAGTGCCCCATG  521

seq1  AATGCTAAACACATGTTCAGCCATGAAGCTACATCACCAACCCTAGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAACACATGTTCAGCCATGAAGCTACATCACCAACCCTAGTGTC  571

seq1  TTAGTTAGAAATGAGAATGTAATGCAGAACTTCATGAGAACTAATTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAGAAATGAGAATGTAATGCAGAACTTCATGAGAACTAATTAAAA  621

seq1  GAATAGCTAGCGTGATGATTCAGATATAGTAGGTGCACAATAAATTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTAGCGTGATGATTCAGATATAGTAGGTGCACAATAAATTGTTC  671

seq1  TTTTCCTATACTCTTAATCAATGGCTTTCATATTTTTTAAAATCCTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTATACTCTTAATCAATGGCTTTCATATTTTTTAAAATCCTCTTT  721

seq1  ACTTCATACTAGATTATTATAATGGCTACACTATCTTTCCTGACATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATACTAGATTATTATAATGGCTACACTATCTTTCCTGACATTTTA  771

seq1  AAGTCTCTCGTGCCTCTAGGATAACTTTAGATATTGCAACCAGATTAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTCGTGCCTCTAGGATAACTTTAGATATTGCAACCAGATTAAAT  821

seq1  ATTTATATAATCTTCACTGTGTGTTAAATACTAGGCCTTTTCTGTCCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATAATCTTCACTGTGTGTTAAATACTAGGCCTTTTCTGTCCCAT  871

seq1  GGTTTAAAATAATCCAGCAAGCAAAGAAACTCACCGTGACTATGAACCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAAAATAATCCAGCAAGCAAAGAAACTCACCGTGACTATGAACCTA  921

seq1  GAAAGTAAATGCACACTTTAGTTGACAGCTTTGCTATAACCTGTTTTGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAAATGCACACTTTAGTTGACAGCTTTGCTATAACCTGTTTTGTG  971

seq1  TGCCCCACAGGCCGCCACCCACCTCAATACTTTTCACTCCTTTTTCCATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCACAGGCCGCCACCCACCTCAATACTTTTCACTCCTTTTTCCATA  1021

seq1  AAGAAAAATCAGAAGAGCCAGACATGGTGCCTCACACCTTTCATCCCAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAATCAGAAGAGCCAGACATGGTGCCTCACACCTTTCATCCCAGT  1071

seq1  ATTCAGGAGGCAGGCAGGTCAATCTTTGTGAGTTAAGGCCAGCCTGGTCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGAGGCAGGCAGGTCAATCTTTGTGAGTTAAGGCCAGCCTGGTCT  1121

seq1  ACAGAATGAATTC  1163
      |||||||||||||
seq2  ACAGAATGAATTC  1134

seq1: chr9_47324240_47325330
seq2: B6Ng01-178A08.g_64_1146

seq1  GAATTCAGAAAAGAGGAGATACCAAGAAGAATGAAGGAGACAAAATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAAGAGGAGATACCAAGAAGAATGAAGGAGACAAAATATAT  50

seq1  GCTTTCAGATGTCACAGACAGCCACCCAGAAAGGGAAATAGCAGCTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGATGTCACAGACAGCCACCCAGAAAGGGAAATAGCAGCTCATA  100

seq1  AGACAATGCTGGTGTCCCATAACCCGTTCCCAGATGATCCTGCTGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGCTGGTGTCCCATAACCCGTTCCCAGATGATCCTGCTGAAGGC  150

seq1  TGCACCACCAGGATTCGAAGGATTGGGATTGATTATTTTGGCAGATCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACCAGGATTCGAAGGATTGGGATTGATTATTTTGGCAGATCTCA  200

seq1  GTGTGGAACACTCCAGGGAAAAAGTGTTGCAACAGGGCACACCTCCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAACACTCCAGGGAAAAAGTGTTGCAACAGGGCACACCTCCCAGG  250

seq1  CTGGGGCGGAGAGGCAACAGCTCTTCTGTCTTCTGCCAGTGGTGTCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCGGAGAGGCAACAGCTCTTCTGTCTTCTGCCAGTGGTGTCTGGG  300

seq1  CAGCTGGCATCCCCTCCTACCATGCTGTGTGTTTGCCCAACTTCAAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGCATCCCCTCCTACCATGCTGTGTGTTTGCCCAACTTCAAAGCC  350

seq1  AGGGCAGCCATCAAAGCAAAGAAGGAAACAGAGACAGGATTAACTCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGCCATCAAAGCAAAGAAGGAAACAGAGACAGGATTAACTCCCCC  400

seq1  GTTCCCCACCCCAACCCCTCTTTCCATCAGGAAACTTCTCTTACCAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCCACCCCAACCCCTCTTTCCATCAGGAAACTTCTCTTACCAAAAT  450

seq1  GTTAACTAGCAGTGCACACTGTATTAATATCTACATGCTGACAGCAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTAGCAGTGCACACTGTATTAATATCTACATGCTGACAGCAGTAA  500

seq1  CCAGGAAGAAGTTTTCACTCTGGTGCTGAGTTATGATGTCCCCAGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGAAGTTTTCACTCTGGTGCTGAGTTATGATGTCCCCAGGAAAA  550

seq1  TAGGAGACAAGAGATATTAGCCTGTACCATGGTGGTGACTCCTATAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGACAAGAGATATTAGCCTGTACCATGGTGGTGACTCCTATAGACA  600

seq1  GATTAAACCTACAGGAGGGCAGGAGTGTTGAGTTTAGGTTTTGTTTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAACCTACAGGAGGGCAGGAGTGTTGAGTTTAGGTTTTGTTTTGTA  650

seq1  TTTGAAAATCAAGACCTGAGTCTGTGACAAATAAGTCTCTGAGAACCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAATCAAGACCTGAGTCTGTGACAAATAAGTCTCTGAGAACCTCT  700

seq1  TGGGTCTGCAACAGTGGAAGACAGCCATACACGTATACATGAAGGTAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGCAACAGTGGAAGACAGCCATACACGTATACATGAAGGTAGCC  750

seq1  GTGCTTCTTCATATCAGCCTGGGTTATCCTAACCCAGCCCAAGAAAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCTTCATATCAGCCTGGGTTATCCTAACCCAGCCCAAGAAAAAGG  800

seq1  TGTTAAGAAAATAGCGCTTGTGTAAAGGAAGACTTTAAAGAATGGGCTTA  850
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTTAAGAAAATAGCGCTTGTGTAAAGGAAGACTTT-AAGAATGGGCTTA  849

seq1  AAAAGCAAAAGCTTTTTGCAAGTTACTGCACTTTCTGAGTCCCAAATTCC  900
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAAGC-AAAGCTTTTTGCAAGTTACTGCACTTTCTGAGTCCC-AATTCC  897

seq1  TAACAACAGTTACGGCAAGAATGAAATGCAACATCTTATACGGAAAAACT  950
      |||| ||||||||||| |||||| ||||||||||||||||||| ||||||
seq2  TAAC-ACAGTTACGGC-AGAATG-AATGCAACATCTTATACGG-AAAACT  943

seq1  GGCTCGTGGTGGATGATCAATACACATTAATGCCTGTATTTGTTTCTCGA  1000
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  GGCTCGTGGTGGATGATC-ATACACATT-ATGCCTGTATTTGTTTCTCGA  991

seq1  AGCCA-CTCTATCAAATCACTGCAGAGGAGGAGCCCTGGTTTGCTACTTC  1049
      ||||| ||||||||||||||||||||||||||| ||||||||||||| ||
seq2  AGCCACCTCTATCAAATCACTGCAGAGGAGGAG-CCTGGTTTGCTAC-TC  1039

seq1  CAGGCTTGAGTGGCTCTAGGC-ATGTCTTCATTTGTA-GCCTTA  1091
      ||||||  |||||||||| || ||||||||||||||| ||||||
seq2  CAGGCTGAAGTGGCTCTAAGCAATGTCTTCATTTGTAGGCCTTA  1083

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BAC

BAC End Information

Alignment Information