BAC Information

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BAC

Clone NameB6Ng01-178G01
Chromosome9 (Build37)
Map Location 117,352,694 - 117,353,408
singlet/doubletsinglet
Overlap genenone
Upstream geneRbms3
Downstream geneLOC665840, LOC100039650, LOC100039681, Azi2, 2010110K16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178G01.bB6Ng01-178G01.g
ACCGA005384GA005385
length715190
definitionB6Ng01-178G01.b B6Ng01-178G01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaaagaccttaaatttaatccagtatttggtgttcagcacact
ttccactatggcattcaagttcaggcattttgtcaaaagtggtgaaagac
tgctgaatatgccctaatttgggagaaattcaggaaagtcaaaatccccc
taaaccacatggcagacatcacgaggccactgtgaatctcacttagtgct
cgtttaaaaaggaatctctgtagaacatatataatgataattgataaagc
aactcacgttatctatccagaaaggaaaatatgcacaaagcgtctctata
atcccaactttgagagagaagacaatgagaacatggtctcctaatcgaag
cagaaaacatttgtgagactagcctttctgttatgattcctgtatggact
ggaaaatggctcctaaccaagtcactctctgggttctacctgtgtgtgaa
taagtatacacacacgtgagcacactcacatgcatatgtactacaaacac
agtcctccacataccaccaccatctccaccacaaccaccaccaccaccac
caccatcaccaccagatattctgatgatctcttataattccagcaatgga
gaaatgcaggcagttgaaccctggagactctttggctagccagtctagcc
ttcttaatgagtttcaggccaatgagactcatgaggacaacggggagggg
aagggagagggaagg

tccgcggaattctctgtgtgtgtgtctctctttcactctgtttctgtttc
tgtctctgtctctctctgtctctgtggtgtgggtatgtgtttgtgtgtgt
gtgtagtggtgtgtgtgtgccactcctgtgcgtgtgctctgtaaaggtgt
gtgtctgctgccttataaaaaactgagttcgtttggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_117352694_117353408
seq2: B6Ng01-178G01.b_43_757

seq1  GAATTCTGAAAGACCTTAAATTTAATCCAGTATTTGGTGTTCAGCACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAAGACCTTAAATTTAATCCAGTATTTGGTGTTCAGCACACT  50

seq1  TTCCACTATGGCATTCAAGTTCAGGCATTTTGTCAAAAGTGGTGAAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTATGGCATTCAAGTTCAGGCATTTTGTCAAAAGTGGTGAAAGAC  100

seq1  TGCTGAATATGCCCTAATTTGGGAGAAATTCAGGAAAGTCAAAATCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATATGCCCTAATTTGGGAGAAATTCAGGAAAGTCAAAATCCCCC  150

seq1  TAAACCACATGGCAGACATCACGAGGCCACTGTGAATCTCACTTAGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCACATGGCAGACATCACGAGGCCACTGTGAATCTCACTTAGTGCT  200

seq1  CGTTTAAAAAGGAATCTCTGTAGAACATATATAATGATAATTGATAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTAAAAAGGAATCTCTGTAGAACATATATAATGATAATTGATAAAGC  250

seq1  AACTCACGTTATCTATCCAGAAAGGAAAATATGCACAAAGCGTCTCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACGTTATCTATCCAGAAAGGAAAATATGCACAAAGCGTCTCTATA  300

seq1  ATCCCAACTTTGAGAGAGAAGACAATGAGAACATGGTCTCCTAATCGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAACTTTGAGAGAGAAGACAATGAGAACATGGTCTCCTAATCGAAG  350

seq1  CAGAAAACATTTGTGAGACTAGCCTTTCTGTTATGATTCCTGTATGGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACATTTGTGAGACTAGCCTTTCTGTTATGATTCCTGTATGGACT  400

seq1  GGAAAATGGCTCCTAACCAAGTCACTCTCTGGGTTCTACCTGTGTGTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATGGCTCCTAACCAAGTCACTCTCTGGGTTCTACCTGTGTGTGAA  450

seq1  TAAGTATACACACACGTGAGCACACTCACATGCATATGTACTACAAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATACACACACGTGAGCACACTCACATGCATATGTACTACAAACAC  500

seq1  AGTCCTCCACATACCACCACCATCTCCACCACAACCACCACCACCACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCCACATACCACCACCATCTCCACCACAACCACCACCACCACCAC  550

seq1  CACCATCACCACCAGATATTCTGATGATCTCTTATAATTCCAGCAATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCACCACCAGATATTCTGATGATCTCTTATAATTCCAGCAATGGA  600

seq1  GAAATGCAGGCAGTTGAACCCTGGAGACTCTTTGGCTAGCCAGTCTAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCAGGCAGTTGAACCCTGGAGACTCTTTGGCTAGCCAGTCTAGCC  650

seq1  TTCTTAATGAGTTTCAGGCCAATGAGACTCATGAGGACAACGGGGAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATGAGTTTCAGGCCAATGAGACTCATGAGGACAACGGGGAGGGG  700

seq1  AAGGGAGAGGGAAGG  715
      |||||||||||||||
seq2  AAGGGAGAGGGAAGG  715


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