MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-178O15
Chromosome	9 (Build37)
Map Location	71,987,186 - 72,127,434
singlet/doublet	doublet
Overlap gene	EG665964, LOC665970, Suhw4
Upstream gene	Aqp9, 1700020I22Rik, LOC100041660, Aldh1a2, Grinl1a, AA407270, LOC547043, LOC100040537, Cgnl1, Tcf12, EG666001, LOC665959
Downstream gene	LOC100041760, Mns1, LOC666007, Tex9, 4930509E16Rik, Rfxdc2, Nedd4, EG639396, Prtg, LOC100040694, Pygo1, Dyx1c1, EG546143, Ccpg1, LOC100041896, Pigb, Rab27a, 2410004A20Rik, BC003885, EG436081
Link	Open Mouse BAC browser

Click to get alignment info.

name	Aqp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64008 MGI:1891066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700020I22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72262 MGI:1919512
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100041660 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Aldh1a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19378 MGI:107928
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grinl1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28015 MGI:107282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AA407270 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102371 MGI:2142908
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547043 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547043
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040537 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Cgnl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68178 MGI:1915428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcf12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21406 MGI:101877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666001 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666001 MGI:3648255
definition	note : predicted gene, EG666001 pseudo : _no_value

name	LOC665959 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins pseudo : _no_value

name	EG665964 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665964 MGI:3644625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 617 ESTs, 15 Proteins

name	LOC665970 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 20 Proteins pseudo : _no_value

name	Suhw4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235469 MGI:2384583
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041760 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Mns1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17427 MGI:107933
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666007 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 ESTs, 12 Proteins pseudo : _no_value

name	Tex9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21778 MGI:1201610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930509E16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75115 MGI:1922365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Rfxdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319758 MGI:2442675
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nedd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17999 MGI:97297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG639396 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639396 MGI:3648991
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prtg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235472 MGI:2444710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040694 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Pygo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72135 MGI:1919385
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dyx1c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67685 MGI:1914935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546143 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546143 MGI:3648770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs

name	Ccpg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72278 MGI:1196419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041896 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Pigb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55981 MGI:1891825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab27a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11891 MGI:1861441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410004A20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66991 MGI:1914241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC003885 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225215 MGI:2681840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG436081 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436081 MGI:3645343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 9 Proteins

name	Aqp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542135 GeneID:64008 MGI:1891066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aquaporin 9 transcript_id : NM_022026.2

name	1700020I22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260065 GeneID:72262 MGI:1919512
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700020I22 gene transcript_id : XM_980183.2

name	LOC100041660 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260066 GeneID:100041660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100041660 transcript_id : XM_001478002.1

name	Aldh1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227213 GeneID:19378 MGI:107928
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde dehydrogenase family 1, subfamily A2 transcript_id : NM_009022.3

name	Grinl1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359777 GeneID:28015 MGI:107282
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A transcript_id : NM_178602.2

name	AA407270 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350194 GeneID:102371 MGI:2142908
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AA407270 transcript_id : NM_001033208.2

name	Cgnl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56550078 GeneID:68178 MGI:1915428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cingulin-like 1 transcript_id : NM_026599.4

name	Tcf12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370916 GeneID:21406 MGI:101877
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor 12 transcript_id : NM_011544.2

name	EG665964 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260016 GeneID:665964 MGI:3644625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 617 ESTs, 15 Proteins product : predicted gene, EG665964 transcript_id : XM_980604.2

name	Suhw4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835724 GeneID:235469 MGI:2384583
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of hairy wing homolog 4 (Drosophila) transcript_id : NM_146224.4

name	LOC100041760 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260069 GeneID:100041760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041760 transcript_id : XM_001478132.1

name	Mns1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892760 GeneID:17427 MGI:107933
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meiosis-specific nuclear structural protein 1 transcript_id : NM_008613.2

name	Tex9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379254 GeneID:21778 MGI:1201610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 9 transcript_id : NM_009359.3

name	4930509E16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260019 GeneID:75115 MGI:1922365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 4930509E16 gene transcript_id : XM_001475016.1

name	Rfxdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88703054 GeneID:319758 MGI:2442675
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X domain containing 2 homolog (human) transcript_id : NM_001033536.1

name	Nedd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56699422 GeneID:17999 MGI:97297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neural precursor cell expressed, developmentally down-regulted gene 4 transcript_id : NM_010890.3

name	EG639396 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348421 GeneID:639396 MGI:3648991
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG639396 transcript_id : NM_001039251.2

name	Prtg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83281201 GeneID:235472 MGI:2444710
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protogenin homolog (Gallus gallus) transcript_id : NM_175485.3

name	LOC100040694 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260021 GeneID:100040694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Mnn4p transcript_id : XM_001475084.1

name	Pygo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:99028873 GeneID:72135 MGI:1919385
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pygopus 1 transcript_id : NM_028116.1

name	Dyx1c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560179 GeneID:67685 MGI:1914935
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dyslexia susceptibility 1 candidate 1 homolog (human) transcript_id : NM_026314.2

name	EG546143 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260072 GeneID:546143 MGI:3648770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs product : predicted gene, EG546143 transcript_id : XM_620762.4

name	Ccpg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345654 GeneID:72278 MGI:1196419
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell cycle progression 1 transcript_id : NM_028181.3

name	LOC100041896 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260074 GeneID:100041896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100041896 transcript_id : XM_001478270.1

name	Pigb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388124 GeneID:55981 MGI:1891825
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class B transcript_id : NM_018889.2

name	Rab27a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384524 GeneID:11891 MGI:1861441
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB27A, member RAS oncogene family transcript_id : NM_023635.3

name	2410004A20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130253 GeneID:66991 MGI:1914241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410004A20 gene transcript_id : NM_025890.2

name	BC003885 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130848 GeneID:225215 MGI:2681840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC003885 transcript_id : NM_198609.2

name	EG436081 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386223 GeneID:436081 MGI:3645343
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 51 ESTs, 9 Proteins product : predicted gene, EG436081 transcript_id : XM_488179.4

name	Aqp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11528512 CCDS:CCDS23325.1 GeneID:64008 MGI:1891066
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA]; GO:0015250 - water channel activity [Evidence TAS] GO_process : GO:0006810 - transport [Evidence IEA]; GO:0006833 - water transport [Evidence TAS] codon_start : 1 product : aquaporin 9 protein_id : NP_071309.1

name	1700020I22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386215 GeneID:72262 MGI:1919512
definition	codon_start : 1 product : hypothetical protein LOC72262 protein_id : XP_985277.1

name	LOC100041660 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260067 GeneID:100041660
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478052.1

name	Aldh1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677665 GeneID:19378 MGI:107928
definition	GO_function : GO:0004028 - 3-chloroallyl aldehyde dehydrogenase activity [Evidence IDA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0001758 - retinal dehydrogenase activity [Evidence IDA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0009855 - determination of bilateral symmetry [Evidence IMP]; GO:0035115 - embryonic forelimb morphogenesis [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0014032 - neural crest cell development [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0031016 - pancreas development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0009954 - proximal/distal pattern formation [Evidence IMP]; GO:0042573 - retinoic acid metabolism [Evidence IMP] [Evidence IDA]; GO:0048384 - retinoic acid receptor signaling pathway [Evidence IMP] codon_start : 1 note : retinaldehyde dehydrogenase 2; alcohol dehydrogenase family 1, subfamily A7; alcohol dehydrogenase family 1, subfamily A2 product : aldehyde dehydrogenase family 1, subfamily A2 protein_id : NP_033048.1

name	Grinl1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519919 CCDS:CCDS23326.1 GeneID:28015 MGI:107282
definition	GO_component : GO:0043025 - cell soma [Evidence IMP] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0051685 - maintenance of ER localization [Evidence IMP] codon_start : 1 product : glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A protein_id : NP_848717.1

name	AA407270 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701616 CCDS:CCDS23327.1 GeneID:102371 MGI:2142908
definition	codon_start : 1 product : hypothetical protein LOC102371 protein_id : NP_001028380.1

name	Cgnl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56550079 CCDS:CCDS23328.1 GeneID:68178 MGI:1915428
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0043296 - apical junction complex [Evidence IDA]; GO:0016459 - myosin [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003774 - motor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : junction-associated coiled-coil protein; paracingulin product : cingulin-like 1 protein_id : NP_080875.3

name	Tcf12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755730 CCDS:CCDS23329.1 GeneID:21406 MGI:101877
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transcription factor 12 protein_id : NP_035674.1

name	EG665964 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260017 GeneID:665964 MGI:3644625
definition	codon_start : 1 product : similar to ubiquitin A-52 residue ribosomal protein fusion product 1 protein_id : XP_985698.2

name	Suhw4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84452159 GeneID:235469 MGI:2384583
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : suppressor of hairy wing homolog 4 protein_id : NP_666336.3

name	LOC100041760 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260070 GeneID:100041760
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478182.1

name	Mns1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678908 GeneID:17427 MGI:107933
definition	GO_component : GO:0005882 - intermediate filament [Evidence IDA]; GO:0005635 - nuclear envelope [Evidence IDA] codon_start : 1 product : meiosis-specific nuclear structural protein 1 protein_id : NP_032639.1

name	Tex9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110349993 GeneID:21778 MGI:1201610
definition	codon_start : 1 product : testis expressed gene 9 protein_id : NP_033385.2

name	4930509E16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260020 GeneID:75115 MGI:1922365
definition	codon_start : 1 product : hypothetical protein LOC75115 protein_id : XP_001475066.1

name	Rfxdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88703055 GeneID:319758 MGI:2442675
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : regulatory factor X domain containing 2 homolog protein_id : NP_001028708.1

name	Nedd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56699423 GeneID:17999 MGI:97297
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0000151 - ubiquitin ligase complex [Evidence IPI] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA] [Evidence TAS] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : neural precursor cell expressed, developmentally down-regulated gene 4a product : neural precursor cell expressed, developmentally down-regulated gene 4 protein_id : NP_035020.2

name	EG639396 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986669 GeneID:639396 MGI:3648991
definition	codon_start : 1 product : hypothetical protein LOC639396 protein_id : NP_001034340.1

name	Prtg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83281202 CCDS:CCDS23331.1 GeneID:235472 MGI:2444710
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : shen-dan product : protogenin protein_id : NP_780694.2

name	LOC100040694 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260022 GeneID:100040694
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475134.1

name	Pygo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:99028874 CCDS:CCDS23332.1 GeneID:72135 MGI:1919385
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : pygopus 1 protein_id : NP_082392.1

name	Dyx1c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560180 CCDS:CCDS23333.1 GeneID:67685 MGI:1914935
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : dyslexia susceptibility 1 candidate 1 homolog protein_id : NP_080590.2

name	EG546143 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260073 GeneID:546143 MGI:3648770
definition	codon_start : 1 product : hypothetical protein protein_id : XP_620762.4

name	LOC100041896 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260075 GeneID:100041896
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478320.1

name	Ccpg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74271884 CCDS:CCDS23334.1 GeneID:72278 MGI:1196419
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : cell cycle progression 8 protein protein_id : NP_082457.2

name	Pigb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256626 GeneID:55981 MGI:1891825
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005789 - endoplasmic reticulum membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006506 - GPI anchor biosynthesis [Evidence IEA]; GO:0006505 - GPI anchor metabolism [Evidence ISS] codon_start : 1 exception : mismatches in translation note : involved in GPI-anchor biosynthesis product : phosphatidylinositol glycan, class B protein_id : NP_061377.1

name	Rab27a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13128964 CCDS:CCDS23335.1 GeneID:11891 MGI:1861441
definition	GO_component : GO:0005622 - intracellular [Evidence ISS]; GO:0042470 - melanosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007596 - blood coagulation [Evidence IMP]; GO:0051875 - pigment granule localization [Evidence IMP]; GO:0051904 - pigment granule transport [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IMP] codon_start : 1 note : ashen product : RAB27A protein protein_id : NP_076124.1

name	2410004A20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468985 CCDS:CCDS23336.1 GeneID:66991 MGI:1914241
definition	codon_start : 1 product : hypothetical protein LOC66991 protein_id : NP_080166.1

name	BC003885 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348464 GeneID:225215 MGI:2681840
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 note : 60S ribosomal protein L30 isolog; probable ribosomal biogenesis protein RPL24 product : ribosomal protein L24-like protein_id : NP_941011.1

name	EG436081 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386224 GeneID:436081 MGI:3645343
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488179.4

name	LOC547043 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547043
definition	number : 3 pseudo : _no_value

name	LOC547043 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547043
definition	number : 2 pseudo : _no_value

name	LOC547043 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547043
definition	number : 1 pseudo : _no_value

name	LOC100040537 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040537
definition	number : 2 pseudo : _no_value

name	LOC100040537 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040537
definition	number : 1 pseudo : _no_value

name	LOC665959 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260068 GeneID:665959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 11 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033550.1

name	LOC665970 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260018 GeneID:665970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 20 Proteins product : similar to high mobility group box 1 pseudo : _no_value transcript_id : XR_032010.1

name	LOC666007 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260071 GeneID:666007
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 ESTs, 12 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_033569.1

clone name	MSMg01-404B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057M24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-178O15.b	B6Ng01-178O15.g
ACC	GA005773	GA005774
length	1,167	1,141
definition	B6Ng01-178O15.b	B6Ng01-178O15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(71,987,186 - 71,988,351)	(72,126,300 - 72,127,434)
sequence	gaattcagccattctgctaggaacaggtagaaggcgtgcatctgtctgac tgtgtgtatgatattcaaggtttatccatattgttactcttattttaaaa taaataaataaataaatgaaggtaatgtgtcttttttctttaaaaaagat tggtaaattagttctttgcaatttcatgtatgtatataatgtactgtctc acacatccatcgcctccaccccatcaatccccctcttccttccttcttct ttctcttctcacctttatatctcacatgcgtatctctgttctttctcttt tctctttcttacatctatatcttttcatttttgtcttgtgacttactggc tggctgtgtgccctagggttttgaaaccattcactggaacctaatacgtt caagccttgagtacccaactaaaggcaatggcaggccatacattaaccca aacaacacatccttagccagaattcctcaggagtcagcagtttaaccggg taaggtgaggccttgactgctcctctctaacccacggcagaaccagtctt gtgcaggcaactgcagccgccgtgacagaatgtctgcaatggctgtgtca tgcctagaggataacgcgttcaagcctttgtactatctactggctcttct attctttttgcctccttttctgcagtggtccctgagccttaagtggtagt agtataaaagtcctgcgtaggactgagggccagtcaccacttattctcca tgactcttgccactcactgtagttcattgcacaggaaagcctctctggtt aaagatggctaagcatatgtctatgggtttgtgcataaatatttagaaag gcagtttggtgaggtgtcaaatttagctaaacagcaacactaaaattccc ctaactcctaaggcctttttgaataagggcttttgaccgagtttacatac caggcctgaataccctcctgcagagcaggcctcaaagacaccaaagagca gttagtcaccaccatagaagtcatgctgtaccaggagactcatcagatgt aactttttctgggacttaattccgtagagcattttaagggtttagggtgt aactgatattgaatgcacacttctccacggtgacttcggccctatggctc cacctctctgctcctgg	gaattcacagaaattgaaactcacagaattggctaaatttggaaattcat gtattattttaatagaaaagagattaggagctgagcaagaataaatcact gaaaatgacttgaaacgaataaatcactgaggcatatggtatcttatacc tcaaatttcagaactggggaggcaagatcatccctggtaacagcacctgt accaggccagcctaagctacataaaattctttcaaacaaacaaacaaaag aataaaacactggaagatgaatagaagagctatgttagtaaggtatgttt atgcaaattaacctctttcacatctagaagagaaactcaagttctgtctt cctgatgcaggagagtggacctcttcctggaactgttggttctcaattgc cttaaattcaaaatattctacatctgttaagtttcaaacccaggacaagc aactaaggtgcctatttaaaaaaaaaaaaaaaaaaaatcaaaatagacct gaagttcaggtccccccaagcattcctccgtccctacctattatagggta ggctgacatacccctctctaccctgaagtctccaggccaggcgctgagct gcccttcccccagaagttctaccttatataatctagatatttggttacct gtccctttttgtaccttcgcctcctagctgctgtacatggttcccttctc tccccttctcctcacaaggctcagggtcatggccactctggactcttcca gatgtcccagcctctggctatgctcacccacttatctataataaactttc tcttcttccatatctagtagtagtcatgtcctttactttttctttttttt cattcgacatcagagtgacatatttttgtgctgggtatgtcctggatttt tatctgcttttaatttttactgaatggtggttaaattttcagtttttttt tttaactgattggcctacaatagaaaaaatgttacatcatacaaaggcaa tgaatgagagatacggcacgtcaggatccttacaaagggatccctggaag gcttcggatggagggtggtccaagaataacttcccaaacatcaatgtgtg tgtagtaatttctggtctgtttaaagaaagaatacagattc
quality values	Open. Hide. 47 14 27 39 54 41 22 38 62 38 26 62 62 62 54 49 62 62 47 62 62 49 62 56 38 62 62 62 62 62 62 59 45 59 44 31 45 59 46 32 59 56 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 54 43 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 47 49 62 62 62 54 53 62 62 62 62 62 47 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 54 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 54 54 42 52 53 52 58 42 45 58 52 54 58 58 52 54 58 52 58 58 52 58 58 52 58 58 54 54 54 58 58 58 54 54 49 58 54 58 54 31 54 58 52 58 54 58 58 54 52 46 58 50 58 58 58 58 54 46 42 50 40 49 49 54 54 51 51 58 50 58 46 50 53 53 58 51 58 46 51 54 51 53 50 58 58 58 58 49 40 58 51 53 58 42 58 58 41 52 49 41 42 50 41 32 58 51 39 43 41 58 50 51 36 25 54 51 53 35 33 58 53 50 58 51 32 53 39 50 51 52 50 52 50 50 58 58 58 52 39 39 58 50 49 35 50 30 50 26 51 41 27 50 53 53 10 58 47 41 49 37 49 33 50 42 47 39 38 39 54 42 35 47 51 53 52 42 41 27 39 49 51 29 54 46 39 47 51 29 41 31 52 54 42 42 42 32 51 35 53 26 49 52 39 40 53 33 45 31 33 42 38 26 51 54 54 53 29 30 33 53 37 37 45 32 33 41 24 28 26 54 51 37 37 30 40 47 24 34 34 53 20 45 34 40 31 32 32 39 45 31 33 32 27 49 33 29 53 28 43 32 32 31 31 31 27 49 16 29 29 32 51 30 33 29 29 51 31 32 51 18 31 25 35 47 29 32 44 28 30 45 31 42 29 45 18 29 31 46 30 37 51 31 31 25 36 36 18 46 32 30 32 36 32 48 16 30 23 31 30 15 46 36 29 31 33 32 46 46 31 32 29 33 31 38 25 34 32 29 18 13 21 25 26 21 48 46 46 31 21 27 28 31 22 11 10 32 10 20 31 46 46 24 15 31 19 33 21 41 23 35 31 21 9 9 24 19 27 30 19 17 26 29 23 20 27 33 31 18 18 24 24 28 25 32 16 27 32 42 21 13 10 38 22 33 26 29 32 26 20 31 20 9 44 31 13 10 7 11 4 18 16 32 33 22 32 15 21 32 24 32 29 32 31 27 27 15 27 32 20 16 32 17 17 13 18 34 38 27 31 27 27 22 22 24 31 24 19 23 21 17 30 12 8 23 9 21 20 28 24 24 27 20 24 7 28 10 9 8 16 15 19 28 38 38 47 18 6 4 5 28 13 20 13 16 15 13 7 6 13 6 16 12 18 25 9 17 7 7 11 3 20 32 23 10 8 15 34 21 7 47 21 6 7 8 13 7 10 5 23 16 20 10 3 5 1 5 4 3 2 3 17 4 21 11 7 5 6 6 7 8 13 10 15 20 6 11 6 10 11 9 11 5 8 8 4 3 1 6 30 14 10 5 7 7 9 3 5 8 4 6 9 12 17 10 17 7 3 2 2 3 4 6 6 8 6	Open. Hide. 62 47 56 47 62 47 51 62 47 62 54 35 32 39 28 28 27 24 28 28 45 46 59 62 59 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 59 62 62 54 54 62 62 62 59 59 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 59 43 49 49 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 46 33 43 46 46 52 52 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 54 47 47 54 58 58 54 58 58 58 58 52 58 58 54 58 54 54 58 54 58 54 58 58 52 58 54 54 48 47 39 45 52 52 58 54 58 54 54 52 52 52 58 54 58 52 58 58 58 51 58 58 58 52 58 51 51 58 47 40 50 54 50 49 48 41 43 49 51 58 49 45 48 35 54 58 51 50 51 54 54 58 50 58 58 58 54 36 37 58 53 46 53 49 53 53 46 46 58 58 51 51 50 52 53 47 49 50 53 52 54 46 54 40 53 53 58 51 58 38 40 48 50 49 58 46 58 43 58 58 58 50 58 58 58 58 58 50 31 47 50 51 52 58 39 58 58 49 51 51 30 51 50 58 44 49 53 52 54 32 27 37 32 50 54 54 49 45 53 54 33 54 52 37 53 38 32 33 54 54 54 37 50 47 40 42 49 43 38 37 37 49 41 49 54 30 50 25 41 12 54 54 35 40 37 30 52 46 39 33 26 22 31 45 31 51 36 45 23 40 37 39 29 20 28 32 30 53 33 42 37 40 54 37 33 20 28 25 27 34 29 46 46 32 32 32 31 39 39 34 32 28 31 52 31 29 33 42 24 31 42 37 31 32 34 26 28 32 34 52 40 25 30 51 40 33 25 32 42 31 34 31 33 33 30 19 33 30 34 30 26 32 31 18 31 31 29 41 16 11 32 26 32 33 27 25 46 33 46 31 31 31 33 46 46 41 24 31 10 46 46 46 48 48 47 31 34 23 27 34 37 12 31 18 24 38 33 27 12 46 28 33 31 22 26 29 30 21 30 46 47 46 32 42 21 32 24 11 21 46 33 16 31 25 39 19 31 33 20 32 16 31 14 48 46 46 22 16 23 32 24 30 24 26 48 44 28 14 25 31 44 44 48 31 11 25 18 37 18 25 17 25 5 7 44 31 14 10 23 41 20 19 43 41 23 25 26 11 21 48 48 48 48 48 47 31 43 37 33 8 12 16 19 20 30 14 26 16 21 18 15 17 27 33 11 29 31 33 13 19 33 43 39 43 22 20 12 9 6 6 8 6 6 32 14 33 10 12 5 34 25 5 10 12 27 20 8 16 10 14 13 21 25 7 17 6 7 8 20 8 15 18 19 15 17 7 22 8 6 8 7 21 4 8 15 15 19 14 10 8 29 16 21 47 21 12 5 4 17 11 7 15 11 7 15 18 27 24 28 13 13 7 8 25 6 10 8 12 6 22 9 7 4 16 10 11 9 11 11 5 22 10 4 4 11 5 7 13 3 11 16 10 25 9 11 9 3 8 7 11 6 7 4 7 7 6 5 3 3 9 7 10 7 7 8 4 4 6 4 7 8 2 2 5 22 22 15 5 2 9 6 4 5 26 9 4 8 7 11 5 6 3 2 1 3 9 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_71987186_71988351
seq2: B6Ng01-178O15.b_49_1215

seq1  GAATTCAGCCATTCTGCTAGGAACAGGTAGAAGGCGTGCATCTGTCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCATTCTGCTAGGAACAGGTAGAAGGCGTGCATCTGTCTGAC  50

seq1  TGTGTGTATGATATTCAAGGTTTATCCATATTGTTACTCTTATTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATGATATTCAAGGTTTATCCATATTGTTACTCTTATTTTAAAA  100

seq1  TAAATAAATAAATAAATGAAGGTAATGTGTCTTTTTTCTTTAAAAAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATAAATGAAGGTAATGTGTCTTTTTTCTTTAAAAAAGAT  150

seq1  TGGTAAATTAGTTCTTTGCAATTTCATGTATGTATATAATGTACTGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATTAGTTCTTTGCAATTTCATGTATGTATATAATGTACTGTCTC  200

seq1  ACACATCCATCGCCTCCACCCCATCAATCCCCCTCTTCCTTCCTTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCCATCGCCTCCACCCCATCAATCCCCCTCTTCCTTCCTTCTTCT  250

seq1  TTCTCTTCTCACCTTTATATCTCACATGCGTATCTCTGTTCTTTCTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTCACCTTTATATCTCACATGCGTATCTCTGTTCTTTCTCTTT  300

seq1  TCTCTTTCTTACATCTATATCTTTTCATTTTTGTCTTGTGACTTACTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTACATCTATATCTTTTCATTTTTGTCTTGTGACTTACTGGC  350

seq1  TGGCTGTGTGCCCTAGGGTTTTGAAACCATTCACTGGAACCTAATACGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTGCCCTAGGGTTTTGAAACCATTCACTGGAACCTAATACGTT  400

seq1  CAAGCCTTGAGTACCCAACTAAAGGCAATGGCAGGCCATACATTAACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTGAGTACCCAACTAAAGGCAATGGCAGGCCATACATTAACCCA  450

seq1  AACAACACATCCTTAGCCAGAATTCCTCAGGAGTCAGCAGTTTAACCGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACATCCTTAGCCAGAATTCCTCAGGAGTCAGCAGTTTAACCGGG  500

seq1  TAAGGTGAGGCCTTGACTGCTCCTCTCTAACCCACGGCAGAACCAGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGAGGCCTTGACTGCTCCTCTCTAACCCACGGCAGAACCAGTCTT  550

seq1  GTGCAGGCAACTGCAGCCGCCGTGACAGAATGTCTGCAATGGCTGTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGCAACTGCAGCCGCCGTGACAGAATGTCTGCAATGGCTGTGTCA  600

seq1  TGCCTAGAGGATAACGCGTTCAAGCCTTTGTACTATCTACTGGCTCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGAGGATAACGCGTTCAAGCCTTTGTACTATCTACTGGCTCTTCT  650

seq1  ATTCTTTTTGCCTCCTTTTCTGCAGTGGTCCCTGAGCCTTAAGTGGTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTTGCCTCCTTTTCTGCAGTGGTCCCTGAGCCTTAAGTGGTAGT  700

seq1  AGTATAAAAGTCCTGCGTAGGACTGAGGGCCAGTCACCACTTATTCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAAGTCCTGCGTAGGACTGAGGGCCAGTCACCACTTATTCTCCA  750

seq1  TGACTCTTGCCACTCACTGTAGTTCATTGCACAGGAAAGCCTCTCTGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTGCCACTCACTGTAGTTCATTGCACAGGAAAGCCTCTCTGGTT  800

seq1  AAAGATGGCTAAGCATATGTCTATGGGTTTGTGCATAAATATTTAG-AAG  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAGATGGCTAAGCATATGTCTATGGGTTTGTGCATAAATATTTAGAAAG  850

seq1  GCAGTTTGGTGAGGTGTCAAATTTAGCTAAACAGCAACACTAAAATTCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGTGAGGTGTCAAATTTAGCTAAACAGCAACACTAAAATTCCC  900

seq1  CTAACTCCTAAGGCCTTTTTGAATAAGGGCTTTTGACCGAGTTTACAATA  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTAACTCCTAAGGCCTTTTTGAATAAGGGCTTTTGACCGAGTTTAC-ATA  949

seq1  CCAGGCCTGAATACCCTCCTGCAGAGCAGGCCTCAAAGACAACCAAAGAG  999
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAGGCCTGAATACCCTCCTGCAGAGCAGGCCTCAAAGAC-ACCAAAGAG  998

seq1  CAGTTAGTCACCACCATAGAAGTCATGCTGTACCAAGAGACTCATCAGAT  1049
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAGTTAGTCACCACCATAGAAGTCATGCTGTACCAGGAGACTCATCAGAT  1048

seq1  GTAACTTTTTCT-GGACTTAATTCCGTAGAGCAATTTTAGGGTTT-TAGT  1097
      |||||||||||| |||||||||||||||||||| ||| |||||||   ||
seq2  GTAACTTTTTCTGGGACTTAATTCCGTAGAGCATTTTAAGGGTTTAGGGT  1098

seq1  GTAACTGAATATTAAATGCACACTTCTCCAC-GTGACTTCAGCCCTAT-G  1145
      ||||||| ||||| ||||||||||||||||| |||||||| ||||||| |
seq2  GTAACTG-ATATTGAATGCACACTTCTCCACGGTGACTTCGGCCCTATGG  1147

seq1  CTCCACCTCTCTGCTCTCTGG  1166
      |||||||||||||||| ||||
seq2  CTCCACCTCTCTGCTC-CTGG  1167

seq1: chr9_72126300_72127434
seq2: B6Ng01-178O15.g_68_1208 (reverse)

seq1  GAATACTGTATTCTTTCTTTAAAAACAGAACCAGATATTACT---TACAC  47
      |||| |||||||||||||||  |||||| |||||| ||||||    ||||
seq2  GAAT-CTGTATTCTTTCTTT--AAACAG-ACCAGAAATTACTACACACAC  46

seq1  ATTGATTGTTTGGGAAAGTTTATCTTGGA-CACC--TCATCTGAAGCC-T  93
      ||||| |||||||| |||||  ||||||| ||||   |||| |||||| |
seq2  ATTGA-TGTTTGGG-AAGTTATTCTTGGACCACCCTCCATCCGAAGCCTT  94

seq1  CCAGGG-TCCCTTTGTAAGGATTCTGACGTGCCGTTATCTCTTCATTCAT  142
      |||||| ||||||||||||||| ||||||||||| |||||| ||||||||
seq2  CCAGGGATCCCTTTGTAAGGATCCTGACGTGCCG-TATCTC-TCATTCAT  142

seq1  TTGCTTTGTATGATTGTACATTTTTTCTATTGTAGG-CAATCAGTT-AAA  190
      |  |||||||||||   ||||||||||||||||||| ||||||||| |||
seq2  TGCCTTTGTATGATGTAACATTTTTTCTATTGTAGGCCAATCAGTTAAAA  192

seq1  AAAAAAACTGAAAATTTAACCA-CATTCAGTAAAAATTAAAAGCAGATAA  239
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAAAAACTGAAAATTTAACCACCATTCAGTAAAAATTAAAAGCAGATAA  242

seq1  AAAT-CAGGACATA-CCAGCACAAAAATATGTCACTCTGATGTCGAATG-  286
      |||| ||||||||| |||||||||||||||||||||||||||||||||| 
seq2  AAATCCAGGACATACCCAGCACAAAAATATGTCACTCTGATGTCGAATGA  292

seq1  AAAAAAAGAAAAAGTAAAGGACATGACTACTACTAGATATGGAAGAAGAG  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAAAAAGTAAAGGACATGACTACTACTAGATATGGAAGAAGAG  342

seq1  AAAGTTTATTATAGATAAGTGGGTGAGCATAGCCAGAGGCTGGGACATCT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTATTATAGATAAGTGGGTGAGCATAGCCAGAGGCTGGGACATCT  392

seq1  GGAAGAGTCCAGAGTGGCCATGACCCTGAGCCTTGTGAGGAGAAGGGGAG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTCCAGAGTGGCCATGACCCTGAGCCTTGTGAGGAGAAGGGGAG  442

seq1  AGAAGGGAACCATGTACAGCAGCTAGGAGGCGAAGGTACAAAAAGGGACA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGAACCATGTACAGCAGCTAGGAGGCGAAGGTACAAAAAGGGACA  492

seq1  GGTAACCAAATATCTAGATTATATAAGGTAGAACTTCTGGGGGAAGGGCA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCAAATATCTAGATTATATAAGGTAGAACTTCTGGGGGAAGGGCA  542

seq1  GCTCAGCGCCTGGCCTGGAGACTTCAGGGTAGAGAGGGGTATGTCAGCCT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCGCCTGGCCTGGAGACTTCAGGGTAGAGAGGGGTATGTCAGCCT  592

seq1  ACCCTATAATAGGTAGGGACGGAGGAATGCTTGGGGGGACCTGAACTTCA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATAATAGGTAGGGACGGAGGAATGCTTGGGGGGACCTGAACTTCA  642

seq1  GGTCTATTTTGATTTTTTTTTTTTTTTTTTTTAAATAGGCACCTTAGTTG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATTTTGATTTTTTTTTTTTTTTTTTTTAAATAGGCACCTTAGTTG  692

seq1  CTTGTCCTGGGTTTGAAACTTAACAGATGTAGAATATTTTGAATTTAAGG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCTGGGTTTGAAACTTAACAGATGTAGAATATTTTGAATTTAAGG  742

seq1  CAATTGAGAACCAACAGTTCCAGGAAGAGGTCCACTCTCCTGCATCAGGA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGAGAACCAACAGTTCCAGGAAGAGGTCCACTCTCCTGCATCAGGA  792

seq1  AGACAGAACTTGAGTTTCTCTTCTAGATGTGAAAGAGGTTAATTTGCATA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAACTTGAGTTTCTCTTCTAGATGTGAAAGAGGTTAATTTGCATA  842

seq1  AACATACCTTACTAACATAGCTCTTCTATTCATCTTCCAGTGTTTTATTC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACCTTACTAACATAGCTCTTCTATTCATCTTCCAGTGTTTTATTC  892

seq1  TTTTGTTTGTTTGTTTGAAAGAATTTTATGTAGCTTAGGCTGGCCTGGTA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTTTGAAAGAATTTTATGTAGCTTAGGCTGGCCTGGTA  942

seq1  CAGGTGCTGTTACCAGGGATGATCTTGCCTCCCCAGTTCTGAAATTTGAG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCTGTTACCAGGGATGATCTTGCCTCCCCAGTTCTGAAATTTGAG  992

seq1  GTATAAGATACCATATGCCTCAGTGATTTATTCGTTTCAAGTCATTTTCA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGATACCATATGCCTCAGTGATTTATTCGTTTCAAGTCATTTTCA  1042

seq1  GTGATTTATTCTTGCTCAGCTCCTAATCTCTTTTCTATTAAAATAATACA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTATTCTTGCTCAGCTCCTAATCTCTTTTCTATTAAAATAATACA  1092

seq1  TGAATTTCCAAATTTAGCCAATTCTGTGAGTTTCAATTTCTGTGAATTC  1135
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCCAAATTTAGCCAATTCTGTGAGTTTCAATTTCTGTGAATTC  1141

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Alignment Information