MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-179K04
Chromosome	9 (Build37)
Map Location	3,569,489 - 3,570,590
singlet/doublet	singlet
Overlap gene	Gucy1a2
Upstream gene	4930433N12Rik, LOC664797, Olfr369-ps1, Alkbh8, Cwf19l2, LOC384911
Downstream gene	LOC100039236, LOC384912, LOC100039253, Aasdhppt, Kbtbd3, LOC664860, 8430410K20Rik, Gria4
Link	Open Mouse BAC browser

Click to get alignment info.

name	4930433N12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114673 MGI:2149746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC664797 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664797
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Olfr369-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404381 MGI:3030203
definition	note : olfactory receptor 369, pseudogene 1 pseudo : _no_value

name	Alkbh8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67667 MGI:1914917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cwf19l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244672 MGI:1918023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC384911 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gucy1a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234889 MGI:2660877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039236 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC384912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 Proteins pseudo : _no_value

name	LOC100039253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Aasdhppt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67618 MGI:1914868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kbtbd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69149 MGI:1916399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664860 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664860
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	8430410K20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78100 MGI:1925350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gria4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14802 MGI:95811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alkbh8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61675695 GeneID:67667 MGI:1914917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alkB, alkylation repair homolog 8 (E. coli) transcript_id : NM_026303.1

name	Cwf19l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802808 GeneID:244672 MGI:1918023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CWF19-like 2, cell cycle control (S. pombe) transcript_id : NM_027545.2

name	Gucy1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109659842 GeneID:234889 MGI:2660877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 1, soluble, alpha 2 transcript_id : NM_001033322.1

name	LOC100039236 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259434 GeneID:100039236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001472505.1

name	Aasdhppt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66773168 GeneID:67618 MGI:1914868
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase transcript_id : NM_026276.2

name	Kbtbd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382668 GeneID:69149 MGI:1916399
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch repeat and BTB (POZ) domain containing 3 transcript_id : NM_026962.2

name	8430410K20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704217 GeneID:78100 MGI:1925350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8430410K20 gene transcript_id : NM_145609.1

name	Gria4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130535 GeneID:14802 MGI:95811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA4 (alpha 4) transcript_id : NM_019691.3

name	Alkbh8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61675696 CCDS:CCDS22792.1 GeneID:67667 MGI:1914917
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : alkB, alkylation repair homolog 8 protein_id : NP_080579.1

name	Cwf19l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30842792 CCDS:CCDS22793.1 GeneID:244672 MGI:1918023
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : CWF19-like 2, cell cycle control protein_id : NP_081821.1

name	Gucy1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109659843 GeneID:234889 MGI:2660877
definition	GO_function : GO:0004383 - guanylate cyclase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0006182 - cGMP biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : guanylate cyclase 1, soluble, alpha 2 protein_id : NP_001028494.1

name	LOC100039236 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259435 GeneID:100039236
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472555.1

name	Aasdhppt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66773169 CCDS:CCDS22794.1 GeneID:67618 MGI:1914868
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008897 - phosphopantetheinyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006633 - fatty acid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase protein_id : NP_080552.2

name	Kbtbd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789183 CCDS:CCDS22795.1 GeneID:69149 MGI:1916399
definition	codon_start : 1 exception : mismatches in translation note : BTB and kelch domain containing 3 product : kelch repeat and BTB (POZ) domain containing 3 protein_id : NP_081238.1

name	8430410K20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704218 CCDS:CCDS22796.1 GeneID:78100 MGI:1925350
definition	codon_start : 1 product : hypothetical protein BC014729 protein_id : NP_663584.1

name	Gria4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254542 CCDS:CCDS22797.1 GeneID:14802 MGI:95811
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : glutamate receptor channel alpha 4; glutamate receptor C; AMPA-selective glutamate receptor 4 (GluR-4) flip product : glutamate receptor, ionotropic, AMPA4 (alpha 4) protein_id : NP_062665.2

name	LOC664797 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664797
definition	number : 1 pseudo : _no_value

name	LOC384911 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384911
definition	number : 2 pseudo : _no_value

name	LOC384911 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384911
definition	number : 1 pseudo : _no_value

name	LOC384912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384912
definition	number : 1 pseudo : _no_value

name	LOC384912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384912
definition	number : 2 pseudo : _no_value

name	LOC384912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384912
definition	number : 3 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 4 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 3 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 2 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 1 pseudo : _no_value

name	LOC664860 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664860
definition	number : 1 pseudo : _no_value

name	4930433N12Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149259436 GeneID:114673 MGI:2149746
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930433N12 gene transcript_id : XR_035187.1

clone name	MSMg01-506K21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-388C07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-354G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463M17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-510A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-485J20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-051H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532B02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518D17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-384C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-179K04.b	B6Ng01-179K04.g
ACC	GA006301	GA006302
length	1,209	1,090
definition	B6Ng01-179K04.b	B6Ng01-179K04.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgtttagctctgtaacccatttttaatggggttatttgaatt tctggagtccagcttcttgagctctttatattagtcccctatcagattta ggattggtaaagatcctttctcaatctgttggtggcctttttgtcttatt gacagttgtcttttgccttacagaagctttgcaattttatgaggtcccat ttgtcaattcttgatcttacagcacaagccattgctgttctttttaggaa tttttcccctgtgcccatatcttcaaggctttctctcactttctcatgta taaatttcagagtctctggttttatgtggagttctttgacccacttagac ttgagctttgtacaaggagataagaatggatcagttcacattcttgtaca tgataccagccagtcttgccagcaccatttgttgaaaatgctttcatttt tccactggatggttttagctcttttgttaaagatcaagtgaccataggtg tgtggattcatttctgggtcttcaattctattccattgatctacctgtct gttgctgtacggataccatgcagtttttataacaattgctctgtagtaca gctttaggtcaggcatggtgattccaccagaggttcttttattgttgaga atattttttgctatcctaggtttttttattattccaaatgaatttgcaaa ttgccctttctaactcagtgaagaattgagatggaattttgatggggatt gcattgagtctgtagattgcttttggcaggatagtcattttgactatatt aatcttgctagtccatgagcatgggagatctttccatcttctgagatctt ctttaatttctttcttcagaaagaagtctggtgtaattctaataggtctg cctttatatgttacttgaccttttttcctttactgcttttaatattctgt ctttatttagtgcatttttgttctgattattatgtgtcaggaggaattct ttcctggtccagtctttttggatctgtagccttctgtatgttcatgggca tctctttcttaggttgggaggtttctccttaatttgttgagatattacct gcccgttagtggaaagtcttcatctcaattaactccaatagccgtagttg gacttctcattgcgtcctgggtaattctcgtggaatgtatttgagtaatg acgtagcta	gtccccaagctagttgtagtagtgcacatttataatcacaaaactgtcag gcagcaatagaaagagacctaggattcactggcaagtcagcctaacctac taggcaatgagagaacctagctctctgcacacacatacaccctctctctc agatatatgaaaggaaagctgggaataatgaataagtaatgaatagtatc caaggaatgaaatttgacgttgccttcttgcctcagaaggcttgcataca catattacatattcatatgcaccctattgcctaaacacacacacacacag atacacagacacacggacacacacacacacttgaattcctttagtgtcat tgtactggcctgtaatctgtgtcaacttggcacaatttggaattatcaca gaaataaaaaaggaacttcagttgaggaaatgtctccaatagatacagct gtaaggaagagaagagcaaacggtcatctccaaaccacaagagaggtact tgcttcaaagtacaaaacccctttgctcattaaggcatcaacaccaaatt aaatgaaataaagtaatcaaaactgcttttattttatgccaatagatgcc aacggatcaaattatctgcctgacattattaataaaactagtcaaaacaa gttacctcaaacaacccattcacttctcatgagagatatggctatgaaca tcactagccttgctaaatatagaatgatattcatcttcccagccatacac tgaagttattgcacataaacaaaagaagaaaagtagactgcaaattaata ataaaacctttaaataaaaaatctatttttccaaatccagctatggtact agcctttcttgcaaattagaaaaagtatcaacttttccatagaagaaata cttcagagaagcttatggttctcaagtccaacattgcatagtgaagcaca cataagcacagtcaaaatactgggccatcagccacctttctcggatgaca gaaacatttcagaaaatgggatgcacatcaatgacagactatatttttaa ctgtgacgtctcttggataatatatacaaactggtagcaa
quality values	Open. Hide. 58 33 33 26 58 58 43 46 62 62 62 62 38 39 54 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 47 56 12 13 18 10 11 13 18 13 25 7 10 13 18 18 62 62 62 62 62 62 62 62 62 62 62 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 26 19 24 23 21 13 23 25 27 25 27 22 34 34 46 43 50 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 54 49 42 54 54 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 54 54 62 62 62 62 54 62 62 48 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 45 32 28 34 34 32 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 54 62 62 62 62 54 58 58 58 58 58 54 54 41 58 54 54 58 58 58 58 58 58 54 58 58 54 58 46 58 52 54 53 58 58 58 58 58 54 42 58 46 54 54 54 58 52 54 58 58 58 58 58 54 41 52 52 52 52 54 58 37 41 58 32 58 48 58 54 49 58 49 58 46 35 58 49 24 58 54 58 46 58 53 46 53 53 58 58 41 41 47 43 47 47 47 49 58 58 47 44 24 45 37 58 41 41 58 58 37 50 49 49 50 58 42 50 40 22 41 48 33 49 50 50 48 58 58 46 44 33 58 53 50 49 51 23 43 41 58 58 50 50 37 49 50 38 49 50 32 32 53 47 39 33 29 58 43 42 49 50 51 31 46 33 50 52 47 39 43 58 58 49 31 52 34 51 58 58 33 41 22 36 51 29 31 53 49 47 47 39 29 33 40 49 23 40 32 35 32 49 46 25 35 54 54 19 21 25 32 21 7 54 39 27 51 21 18 33 34 30 54 54 33 37 32 32 34 41 41 30 41 26 31 54 37 37 25 51 52 33 37 38 34 28 34 41 31 31 40 54 24 33 33 34 33 51 53 39 13 35 23 45 31 49 31 17 40 26 31 18 7 20 27 30 29 45 22 31 22 32 31 17 30 33 51 29 28 16 24 52 26 31 33 45 31 30 33 25 38 21 6 46 36 41 15 19 18 11 18 32 28 33 13 11 32 16 25 18 30 30 31 34 31 31 28 33 9 25 16 31 31 16 12 38 26 46 31 31 28 32 24 14 9 25 16 21 26 20 27 32 23 30 31 46 46 46 16 18 13 32 10 41 8 23 14 20 37 32 32 44 46 25 33 31 16 20 11 21 32 32 48 18 30 13 46 13 11 22 44 18 17 28 10 28 24 23 24 36 48 36 25 16 11 30 31 9 24 31 14 27 32 37 23 22 8 34 17 31 11 31 10 11 18 30 20 28 13 21 48 43 29 21 32 23 7 11 15 22 23 10 6 30 17 17 32 19 13 33 43 26 34 8 16 8 6 7 8 21 32 25 15 11 12 20 18 12 15 21 7 22 10 32 14 13 24 7 14 28 27 20 21 27 32 11 5 6 26 32 6 6 9 10 7 13 13 11 3 10 40 7 7 5 14 27 23 16 6 12 5 5 4 9 9 11 10 40 11 16 14 11 11 13 5 8 7 7 18 6 12 8 5 6 2 4 28 25 10 25 17 8 3 7 4 5 17 17 4 3 2 8 8 9 9 5 19 7 6 22 4 8 4 1 1 4 6 7 11 12 4 4 4 5 4 9 16 7 6 6 2 3 3 12 12 1 3 3 3 13 3 4 11 11 11 6 6 22 4 2 5 4 6 12 16 4 3 6 11 9 5 4 18 5 4 6 6 7 13 6 23 8 5 7 11 2 3 20 3 3 2 10 5 6 4 4 21 5 6 4 8 11 4	Open. Hide. 44 62 62 62 62 16 16 12 10 17 11 11 13 18 13 27 13 12 13 13 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 24 18 34 23 23 34 28 25 34 32 48 46 56 51 59 59 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 34 19 13 8 10 18 10 50 62 62 62 56 62 62 54 54 62 62 62 62 62 56 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 54 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 49 49 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 44 62 56 62 62 62 62 49 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 44 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 54 62 62 62 62 62 62 54 50 47 58 58 58 58 54 58 58 58 58 54 58 58 58 58 58 58 58 58 58 54 52 58 54 58 58 54 49 42 58 58 58 58 58 58 54 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 52 58 58 58 54 52 54 58 54 58 48 58 58 58 58 58 58 58 58 58 58 58 40 53 58 58 58 53 58 58 30 45 35 58 58 58 53 53 38 41 48 51 47 58 58 58 58 58 52 58 53 58 58 52 58 49 54 58 49 58 37 41 46 58 54 33 37 58 51 53 41 46 52 58 53 53 58 58 58 50 49 39 58 51 52 50 58 58 51 50 43 58 53 54 51 39 38 46 58 51 37 54 58 49 41 50 50 44 41 42 58 58 47 40 44 58 58 50 47 40 40 49 54 51 35 46 42 53 29 50 37 51 54 37 53 53 53 51 54 47 49 34 53 52 41 38 51 52 44 49 54 47 51 46 33 37 43 54 40 42 39 42 40 34 53 37 32 53 52 42 42 37 47 45 32 45 53 31 34 33 54 49 31 35 46 45 24 45 32 45 29 52 45 53 32 33 33 39 53 31 32 35 35 32 31 52 32 53 52 51 26 41 12 40 51 36 29 40 28 21 46 53 53 52 32 36 43 31 29 25 31 51 30 29 40 40 30 35 31 38 42 33 31 31 20 51 40 33 28 33 25 40 25 23 46 36 30 30 51 51 47 46 31 31 32 31 30 31 48 47 46 26 25 25 7 46 44 31 28 30 23 31 29 31 24 31 30 44 21 26 26 28 25 26 33 31 31 48 31 25 33 23 24 20 46 32 31 30 22 31 14 14 46 46 46 16 23 21 10 20 33 16 27 30 31 46 46 31 19 33 23 32 32 21 33 27 23 32 44 25 9 9 29 16 26 11 20 16 44 18 35 42 18 37 22 25 31 31 37 35 11 38 33 34 31 15 16 36 25 18 33 12 20 31 26 26 24 32 32 21 22 16 27 22 37 17 19 14 28 22 20 12 17 14 21 8 33 14 32 15 15 22 34 27 16 8 31 48 27 25 13 30 25 21 39 10 19 17 27 32 8 7 7 18 7 6 8 15 5 40 13 16 26 26 10 15 8 3 3 5 10 10 13 20 29 21 16 10 23 21 19 20 6 13 7 47 40 22 17 16 40 5 30 13 25 6 4 9 15 19 18 16 27 9 27 11 17 9 8 27 11 18 7 20 5 3 20 29 30 12 3 7 6 12 12 5 12 17 20 19 10 9 20 10 7 21 7 16 6 4 13 17 11 8 12 5 14 16 23 10 17 20 7 7 13 14 4 10 10 5 2 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_3569489_3570590
seq2: B6Ng01-179K04.g_73_1162 (reverse)

seq1  TTGCTTACCAGTTTTGTATATATTATCCAAGAAGACGTCACAGTTTAAAA  50
      |||| |||||| ||||||||||||||||||| |||||||||||||  |||
seq2  TTGC-TACCAG-TTTGTATATATTATCCAAG-AGACGTCACAGTT--AAA  45

seq1  AATTAATAGTTCTGGTCATTTGATGTGCCATTCCATTTTCCTGAAATGTT  100
      |||  |||| ||| |||| |||||||| ||| ||||||| ||||||||||
seq2  AAT--ATAG-TCT-GTCA-TTGATGTG-CATCCCATTTT-CTGAAATGTT  88

seq1  TCTGTCCTTCCGAG-AAGGTGCTTGATGG-CCAGTATTTTGACTGTGCTT  148
      ||||| | |||||| ||||||  |||||| ||||||||||||||||||||
seq2  TCTGT-CATCCGAGAAAGGTGGCTGATGGCCCAGTATTTTGACTGTGCTT  137

seq1  ATGTGTGCTTCACTATGCAATGTTGGACTTGAGAACCATAAGCTTCTCTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCTTCACTATGCAATGTTGGACTTGAGAACCATAAGCTTCTCTG  187

seq1  AAGTATTTCTTCTATGGAAAAGTTGATACTTTTTCTAATTTTGCAAGAAA  248
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGTATTTCTTCTATGGAAAAGTTGATACTTTTTCTAA-TTTGCAAGAAA  236

seq1  GGCTAGTACCATAGCTGGATTTGGAAAAATAGATTTTTTATTTAAAGGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGTACCATAGCTGGATTTGGAAAAATAGATTTTTTATTTAAAGGTT  286

seq1  TTATTATTAATTTGCAGTCTACTTTTCTTCTTTTGTTTATGTGCAATAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAATTTGCAGTCTACTTTTCTTCTTTTGTTTATGTGCAATAAC  336

seq1  TTCAGTGTATGGCTGGGAAGATGAATATCATTCTATATTTAGCAAGGCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTATGGCTGGGAAGATGAATATCATTCTATATTTAGCAAGGCTA  386

seq1  GTGATGTTCATAGCCATATCTCTCATGAGAAGTGAATGGGTTGTTTGAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTCATAGCCATATCTCTCATGAGAAGTGAATGGGTTGTTTGAGG  436

seq1  TAACTTGTTTTGACTAGTTTTATTAATAATGTCAGGCAGATAATTTGATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGTTTTGACTAGTTTTATTAATAATGTCAGGCAGATAATTTGATC  486

seq1  CGTTGGCATCTATTGGCATAAAATAAAAGCAGTTTTGATTACTTTATTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGGCATCTATTGGCATAAAATAAAAGCAGTTTTGATTACTTTATTTC  536

seq1  ATTTAATTTGGTGTTGATGCCTTAATGAGCAAAGGGGTTTTGTACTTTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTTGGTGTTGATGCCTTAATGAGCAAAGGGGTTTTGTACTTTGA  586

seq1  AGCAAGTACCTCTCTTGTGGTTTGGAGATGACCGTTTGCTCTTCTCTTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTACCTCTCTTGTGGTTTGGAGATGACCGTTTGCTCTTCTCTTCC  636

seq1  TTACAGCTGTATCTATTGGAGACATTTCCTCAACTGAAGTTCCTTTTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTGTATCTATTGGAGACATTTCCTCAACTGAAGTTCCTTTTTTA  686

seq1  TTTCTGTGATAATTCCAAATTGTGCCAAGTTGACACAGATTACAGGCCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGATAATTCCAAATTGTGCCAAGTTGACACAGATTACAGGCCAG  736

seq1  TACAATGACACTAAAGGAATTCAAGTGTGTGTGTGTGTCCGTGTGTCTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGACACTAAAGGAATTCAAGTGTGTGTGTGTGTCCGTGTGTCTGT  786

seq1  GTATCTGTGTGTGTGTGTGTTTAGGCAATAGGGTGCATATGAATATGTAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGTGTGTGTGTGTGTTTAGGCAATAGGGTGCATATGAATATGTAA  836

seq1  TATGTGTATGCAAGCCTTCTGAGGCAAGAAGGCAACGTCAAATTTCATTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTATGCAAGCCTTCTGAGGCAAGAAGGCAACGTCAAATTTCATTC  886

seq1  CTTGGATACTATTCATTACTTATTCATTATTCCCAGCTTTCCTTTCATAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATACTATTCATTACTTATTCATTATTCCCAGCTTTCCTTTCATAT  936

seq1  ATCTGAGAGAGAGGGTGTATGTGTGTGCAGAGAGCTAGGTTCTCTCATTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAGAGAGGGTGTATGTGTGTGCAGAGAGCTAGGTTCTCTCATTG  986

seq1  CCTAGTAGGTTAGGCTGACTTGCCAGTGAATCCTAGGTCTCTTTCTATTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTAGGTTAGGCTGACTTGCCAGTGAATCCTAGGTCTCTTTCTATTG  1036

seq1  CTGCCTGACAGTTTTGTGATTATAAATGTGCACTACTACAACTAGCTTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGACAGTTTTGTGATTATAAATGTGCACTACTACAACTAGCTTGG  1086

seq1  GGAC  1102
      ||||
seq2  GGAC  1090

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information