BAC Information

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BAC

Clone NameB6Ng01-179M22
Chromosome9 (Build37)
Map Location 80,034,002 - 80,034,623
singlet/doubletsinglet
Overlap geneMyo6
Upstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490, Senp6, LOC100041249
Downstream geneImpg1, EG666534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179M22.bB6Ng01-179M22.g
ACCGA006426GA006427
length473623
definitionB6Ng01-179M22.b B6Ng01-179M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctctcactccttggttgtgaagaatgcctacagcagctgttgacaatca
tcccaaacaggctgatgagagaacataagggactccaccaaccctgtggg
gcgttagggatcctctgagaaaggggggtggttagttttccagttataaa
gatcagcagaggaaaatggccagtactgaaggggttgaagtttgggcggg
tccaccagagtctgtctggactctgtgctctccagctccatgtaccctca
gcgggtccacctcccgctgccccgaggggctcagggttccccagcggtgg
gggttggttgaggctgtgaataaggggaaggtagtggactaggccgctca
ggaggcttctcaatcttggggtagattttggaggagctgatggactagtt
ggtggttcttatcagggagaagccttcactttcttttttttttgtaacac
cagatttcttcttttattttggg

gaattctattgtgctcacatccagacagtgagtacagaaagtcgctccaa
attctcatttctattggaggaaaaagtaaagactttgtgttccctcattc
aaaatgggaagatcaggagggtggacacttgatgagtctgttttacaaga
attatttatttatttatgagtgcatgtttatctatatatgaagcacttga
gtgtggctagcaggctagcagatctgttattgtttgtaactgttcagaat
ctatctttgtatgctattttctctttaaattttaatgacaaagaatggtc
ttatagctctgaggaatttacatctctgaagaatacatcccaaggtaaaa
gacactctgtcctgcccttgttgctcatgaatcaacttcttggatcagaa
actacacactttagtagattcaacaaagaacccttttatttatctcttca
tttcaaattagagattttgctatcaaaaagaaaaccaaacagacccgaaa
tggcaaatgcagtgcatgctggccagctgcacctcaattgtgcctggact
ggtcactttctttgttgctaggacacaatacccgacaaaaggaagggagg
gagggagggagcgagggagggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_80034002_80034623
seq2: B6Ng01-179M22.g_67_688 (reverse)

seq1  TCCCTCCCTCGCTCCCTCCCTCCCTCCCTTCCTTTTGTCGGGTATTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCGCTCCCTCCCTCCCTCCCTTCCTTTTGTCGGGTATTGTGT  50

seq1  CCTAGCAACAAAGAAAGTGACCAGTCCAGGCACAATTGAGGTGCAGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAACAAAGAAAGTGACCAGTCCAGGCACAATTGAGGTGCAGCTGG  100

seq1  CCAGCATGCACTGCATTTGCCATTTCGGGTCTGTTTGGTTTTCTTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATGCACTGCATTTGCCATTTCGGGTCTGTTTGGTTTTCTTTTTGA  150

seq1  TAGCAAAATCTCTAATTTGAAATGAAGAGATAAATAAAAGGGTTCTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAATCTCTAATTTGAAATGAAGAGATAAATAAAAGGGTTCTTTGT  200

seq1  TGAATCTACTAAAGTGTGTAGTTTCTGATCCAAGAAGTTGATTCATGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTACTAAAGTGTGTAGTTTCTGATCCAAGAAGTTGATTCATGAGC  250

seq1  AACAAGGGCAGGACAGAGTGTCTTTTACCTTGGGATGTATTCTTCAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGCAGGACAGAGTGTCTTTTACCTTGGGATGTATTCTTCAGAGA  300

seq1  TGTAAATTCCTCAGAGCTATAAGACCATTCTTTGTCATTAAAATTTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTCCTCAGAGCTATAAGACCATTCTTTGTCATTAAAATTTAAAG  350

seq1  AGAAAATAGCATACAAAGATAGATTCTGAACAGTTACAAACAATAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAGCATACAAAGATAGATTCTGAACAGTTACAAACAATAACAGA  400

seq1  TCTGCTAGCCTGCTAGCCACACTCAAGTGCTTCATATATAGATAAACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTAGCCTGCTAGCCACACTCAAGTGCTTCATATATAGATAAACATG  450

seq1  CACTCATAAATAAATAAATAATTCTTGTAAAACAGACTCATCAAGTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATAAATAAATAAATAATTCTTGTAAAACAGACTCATCAAGTGTCC  500

seq1  ACCCTCCTGATCTTCCCATTTTGAATGAGGGAACACAAAGTCTTTACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTGATCTTCCCATTTTGAATGAGGGAACACAAAGTCTTTACTTT  550

seq1  TTCCTCCAATAGAAATGAGAATTTGGAGCGACTTTCTGTACTCACTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCAATAGAAATGAGAATTTGGAGCGACTTTCTGTACTCACTGTCT  600

seq1  GGATGTGAGCACAATAGAATTC  622
      ||||||||||||||||||||||
seq2  GGATGTGAGCACAATAGAATTC  622


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