BAC Information

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BAC

Clone NameB6Ng01-180L15
Chromosome9 (Build37)
Map Location 118,354,518 - 118,508,288
singlet/doubletdoublet
Overlap geneEomes, Golga4
Upstream geneLOC665840, LOC100039650, LOC100039681, Azi2, 2010110K16Rik
Downstream geneItga9, LOC100039768, Ctdspl, Vill, Plcd1, Dlec1, Acaa1b, EG546165, Slc22a14, Slc22a13, 9330176C04Rik, Oxsr1, Myd88, Acaa1a, Xylb, Acvr2b, Endogl1, Scn5a
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180L15.bB6Ng01-180L15.g
ACCGA007080GA007081
length272227
definitionB6Ng01-180L15.b B6Ng01-180L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,508,011 - 118,508,288)(118,354,518 - 118,354,744)
sequence
cttgatctgatcccaggcaggtctgttaactaaattgcatctataagcac
acagcacataaaaaggaagctgggcttttactatgtttgctgtatgtggt
ggtttgaaggggatgtcctctgtagcttcgggcatttgagaccctgacgg
tggcactgtttggatgatgtggtcttgatagagggcatatgtcacttggg
caggctttgaagcagcgtttcaggttctctctctctctctctctctctct
ctctctctctctctctctctct

aaaccatcagggcatttgtcctgtgtgctgcgagcagatccactggggtg
ggggtactctggatcgcacctggggcctggctacttactccgagttcttc
acctcagcttcctgtcaggcccatgaattcctcggggaagactcagattc
ctgtactggacacccacacaaagccgtgaagagaggcaaagaacgcacat
tggggctggggtgggaggtggggatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_118508011_118508288
seq2: B6Ng01-180L15.b_46_323 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACC  50

seq1  TGAAACGCTGCTTCAAAGCCTGCCCAAGTGACATATGCCCTCTATCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACGCTGCTTCAAAGCCTGCCCAAGTGACATATGCCCTCTATCAAGA  100

seq1  CCACATCATCCAAACAGTGCCACCGTCAGGGTCTCAAATGCCCGAAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCATCCAAACAGTGCCACCGTCAGGGTCTCAAATGCCCGAAGCTA  150

seq1  CAGAGGACATCCCCTTCAAACCACCACATACAGCAAACATAGTAAAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACATCCCCTTCAAACCACCACATACAGCAAACATAGTAAAAGCC  200

seq1  CAGCTTCCTTTTTATGTGCTGTGTGCTTATAGATGCAATTTAGTTAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCTTTTTATGTGCTGTGTGCTTATAGATGCAATTTAGTTAACAG  250

seq1  ACCTGCCTGGGATCAGATCAAGGAATTC  278
      ||||||||||||||||||||||||||||
seq2  ACCTGCCTGGGATCAGATCAAGGAATTC  278


seq1: chr9_118354518_118354744
seq2: B6Ng01-180L15.g_71_297

seq1  AAACCATCAGGGCATTTGTCCTGTGTGCTGCGAGCAGATCCACTGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCAGGGCATTTGTCCTGTGTGCTGCGAGCAGATCCACTGGGGTG  50

seq1  GGGGTACTCTGGATCGCACCTGGGGCCTGGCTACTTACTCCGAGTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTACTCTGGATCGCACCTGGGGCCTGGCTACTTACTCCGAGTTCTTC  100

seq1  ACCTCAGCTTCCTGTCAGGCCCATGAATTCCTCGGGGAAGACTCAGATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGCTTCCTGTCAGGCCCATGAATTCCTCGGGGAAGACTCAGATTC  150

seq1  CTGTACTGGACACCCACACAAAGCCGTGAAGAGAGGCAAAGAACGCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGACACCCACACAAAGCCGTGAAGAGAGGCAAAGAACGCACAT  200

seq1  TGGGGCTGGGGTGGGAGGTGGGGATGG  227
      |||||||||||||||||||||||||||
seq2  TGGGGCTGGGGTGGGAGGTGGGGATGG  227


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