BAC Information

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BAC

Clone NameB6Ng01-181A07
Chromosome9 (Build37)
Map Location 4,027,160 - 4,027,709
singlet/doubletsinglet
Overlap genenone
Upstream gene4930433N12Rik, LOC664797, Olfr369-ps1, Alkbh8, Cwf19l2, LOC384911, Gucy1a2, LOC100039236
Downstream geneLOC384912, LOC100039253, Aasdhppt, Kbtbd3, LOC664860, 8430410K20Rik, Gria4, EG664889
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181A07.bB6Ng01-181A07.g
ACCGA007294GA007295
length1,0181,182
definitionB6Ng01-181A07.b B6Ng01-181A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagattttcccaaaccattcatttccatcaaagaggattatat
gcagctttttttgtttttattttacacaaacatggctctgttgtgtatta
ttaataaaccacggcctcttggcatatacctctgctttagattgatatga
ctctgaaatctggttgctgtcattgactaaccagccctcatagcacacct
tattctcaaatcagaccaaagccacaatatatattgaatatgcatcttca
tatcgattaatttctgccacctgcatttgctggaggtgaggctacgcact
tgctgaaatcagactgtgaggcgttgactgacctgacctgcttgaaaaac
aaagccagccaagacagtgaaaaacaacaggataaaagcttctttgtaga
agccccggtactttattcagttgcaaattagcaacgatcaagctcaggtt
ctgtcctcccagtgtgggggagctggctttgagaattagcagaaagccag
agattctctggaagtggaggctgtgctccaaattaactgtgctaggtaat
taagatttttagctattttcaataagaatctctaatgttggaattattac
tagaccaatccaagattgagttaggataaccagtcacattgaaggaaaga
gaaaaattattaaaactatttcttatgactaatctttctaagtcagattc
catggtctttaacgttctatttcccataagattaaaaagtttgaagcaag
gcaccttacttgtccaatctgggacagaggcaagcaaaggtgggtcaaaa
catgtacccaattcagctttcttgtcaccaccatcagggcactcagcgaa
ctcacaggtcagcttttcacatgaatttatttgacagttgtcatgcttct
gcagcattctgtagagagaaccaaagctttcccctttccccaatagggta
gttgttcagatcaagccatatgccaataagtagatccttttcatctcacc
taggcacgattatgtcta

gaattctgtttacatctgtataccatttttaaaatgggttatttagtttc
ctggtgtctaatttcttgagttctttttatagtttaaatattagtcctct
gttggatgtacattgaatacagttctttctccattatttaggctgctgtt
tggtcctattgatggtatccttagccttgctgaaggttttcagtttcatg
aggtccccacttattaattgttgattatagtgcctgagccaatggtgttc
tgttcaggaatgtctcctgtgccaatgtattcaaggaagttcccaacttt
tttttctattatatttgatatttatggttttatgttaaggtcttttatcc
cgttgaacttgagttttgtgtgacgtgataaatgtggttctatttgcatt
cttctacatgtagacatccagttagaatagtactatttgttgaagactct
ttctttttttcccactgtatggttttggcttctttgttaaaagtctagcg
tccagccgggcgtggtggtaaacgcctttaatcccagcactcgggaggca
gaggcaggcagatttctgagtttgaggccagcctggtctacatggtgagt
tccaggacagctagggctatacagaaaaaccctgtctcggaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaccaaacaaacaaaaaaaaagtctagtgtcc
ttaggtatgtgggtttatttctgggttttcaatttgattccattttatac
ccatcagaatggaacagatcaaaaactcaagtgacagcatatgctggaca
gaaattagaccaagaggaagactcctccattgcttgtggaagtacaaact
tgtacaaccactttggaaatcaatttgatggtttattggaaaactgataa
tagttctaccccaaactcaactataacactcctggacatataccaaaata
tgccttactataccactagaacacttgctcattatgtcatagcagcttta
tagtatagcagaaatgcaacactaaatgtctactgaggatagaaaagaag
tgaatcctaaccatgtattcagcttaaacagagacatcatgaattgccaa
cattgccgaacttgaaaatatcctgatagtactgaatccgagagacacat
gtcatcactactataatttgccatatagccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_4027160_4027709
seq2: B6Ng01-181A07.b_46_599 (reverse)

seq1  CTTAATTACCTAGCAAAGTTAATTTGGAGCACAGCCTTCACTTCCAGAGA  50
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  CTTAATTACCTAGCACAGTTAATTTGGAGCACAGCCTCCACTTCCAGAGA  50

seq1  ATCTCTGGCCTTTCTGCTAATTCTCAAAGCCAACTCCCCCACACCGGGAG  100
      |||||||| ||||||||||||||||||||||| ||||||||||| |||||
seq2  ATCTCTGG-CTTTCTGCTAATTCTCAAAGCCAGCTCCCCCACACTGGGAG  99

seq1  GCCAGAGCCTGAGCTTGATTGTTGCTAATTTGCAACTGAATAAAGTACCT  150
      | |||| |||||||||||| ||||||||||||||||||||||||||||| 
seq2  GACAGAACCTGAGCTTGATCGTTGCTAATTTGCAACTGAATAAAGTACCG  149

seq1  GGGCTTCCACAAAGAAGCTTTTATCCTGTTGCTTTTCACTGTCT----CA  196
      ||||||| ||||||||||||||||||||||| ||||||||||||      
seq2  GGGCTTCTACAAAGAAGCTTTTATCCTGTTGTTTTTCACTGTCTTGGCTG  199

seq1  CCTTTGTTTTTCAAG-----CAGGTCAGTCAATGCCTCACAGTCTGATTT  241
       ||||||||||||||     |||||||||||| |||||||||||||||||
seq2  GCTTTGTTTTTCAAGCAGGTCAGGTCAGTCAACGCCTCACAGTCTGATTT  249

seq1  CAGCAAGTGTGCAGCCTCGCCTCTAGCAAGCGCAGGTGGTAGAAATTAAT  291
      ||||||||| | |||||| |||| |||||  |||||||| ||||||||||
seq2  CAGCAAGTGCGTAGCCTCACCTCCAGCAAATGCAGGTGGCAGAAATTAAT  299

seq1  CAATATCAAGAAGCATATTCAATATATATATATTGTGGCTTTGGTCTGAT  341
      | |||| |||| |||||||||    |||||||||||||||||||||||||
seq2  CGATATGAAGATGCATATTCA----ATATATATTGTGGCTTTGGTCTGAT  345

seq1  TTGAGAATAAGGTGTGCTATGAGAGCCAGTTAGTCAATGATGGGCAACCA  391
      ||||||||||||||||||||||| ||  ||||||||||||   |||||||
seq2  TTGAGAATAAGGTGTGCTATGAGGGCTGGTTAGTCAATGA-CAGCAACCA  394

seq1  GATTTCAGAGCCATATCAACCTAATATAGAGTTATATGCCAAGAGGCCAT  441
      |||||||||| |||||||| ||||   |||| |||||||||||||||| |
seq2  GATTTCAGAGTCATATCAATCTAAAGCAGAGGTATATGCCAAGAGGCCGT  444

seq1  GGTTTATTAATAATATACCACTGAGCCAAGTTTTTGCAAAATAAACACAA  491
      ||||||||||||||| || || |||||| |||| || |||||||| ||||
seq2  GGTTTATTAATAATACACAACAGAGCCATGTTTGTGTAAAATAAAAACAA  494

seq1  ACAAA-CTGCATATAATCATCTTTGACAGATCTGAATGGTTCGGGAAAAT  540
      | ||| |||||||||||| |||||||  ||  ||||||||| ||||||||
seq2  AAAAAGCTGCATATAATCCTCTTTGATGGAAATGAATGGTTTGGGAAAAT  544

seq1  CTGAGAATTC  550
      ||||||||||
seq2  CTGAGAATTC  554


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