BAC Information

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BAC

Clone NameB6Ng01-181M07
Chromosome9 (Build37)
Map Location 38,823,961 - 38,921,718
singlet/doubletdoublet
Overlap geneOlfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1
Upstream geneOlfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935
Downstream geneOlfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983, Olfr984
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181M07.bB6Ng01-181M07.g
ACCGA007842GA007843
length3331,106
definitionB6Ng01-181M07.b B6Ng01-181M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,921,386 - 38,921,718)(38,823,961 - 38,825,061)
sequence
tttacagcagagtagatgtcattttaccttatactgctgtggtgacctaa
gatcattgtcattttctttgaaattcagcaatagttagagtgagaatgag
aggggaaggagagagagagaggcaggatgagacagaggggagagagagag
aaagagagagagagacagagagagagagagagagagtgtgtgtgagagag
agagagagagagagagagagagagagagagagagagagagagagagagag
aatgaatctggggaaaggacagagaaagatgctagaacctgtcctttccg
catggtattataatgattgatccaatggctccc
gaattctggtataggataggtagtgaagttagagcaatagattctgcacc
caggagttgtgttatatgtcttgttttaaagcataagaactaaatggtgt
tttccatccacagaacaaaggtgggaagagaaagagaacaacagaggtgg
tcattgtcaggttggctgagctcgccacagggtggtggagaggaatctca
gctcctggaattcctgggaaaagcatcagttggcagtaagtagagctgac
tgaagcaggcagctgttgatcacatagcctagctgagcacagcagagctc
ttgagaaagatcaagcttgtttgtaaatgtacatgctacaggtatttcct
gtggcattcaatatttttatttgttatttaagtttagtgtttcagtatta
tattactagggaactcctttttggttctttcaattgagtggaccatattc
ctcttgctctgtgataagcattttcttctttcaatttaggaaatgttctt
ttgtttctgtgtgcctgcctcctcacatagctcctttggtgtctttatat
cttgttcccctcttaaatttcctgataaacttttaaaataatattatgaa
ataaacatttttcatatacttttttatcacatttttcccatacatcttcc
ccctgaactgcactgaaattcaagattttaccccatacctctctctctga
aaaatcaaacaaacaaacccaaaagttaagataaaacaaaaaatgcaaag
tagttattaattctattttgtgttggctaactctttctgagcataaagcc
tgtctggagtttgattgatatacccagtgtctttctatagaggagaaaaa
agtcccgagtttcagccttagatttgaacatgttcctttagtaagtttga
caagtacgttttctgtgattttatttgggtttcttcttctattagtatat
atttcttgcttttgtagtgtcctatggctcttgtcttaaggttttattcg
atttatcatttcttgaatagtgaatataactctactttgctcagtacttg
atatatctctaaatttgatcattttactgcatggtttatattaacatgtt
tggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38921386_38921718
seq2: B6Ng01-181M07.b_50_382 (reverse)

seq1  GGGAGCCATTAGATTGATCATTCTAATGCCATGCTTAAAAGACAGTTTCT  50
      |||||||||| |||  |||||| |||| ||||||  ||| ||||| ||||
seq2  GGGAGCCATTGGATCAATCATTATAATACCATGCGGAAAGGACAGGTTCT  50

seq1  AGCATCTTTCTCTGTCCTTTCCCTAGATTCATTCTCTCTCTCTCTCTCTC  100
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGCATCTTTCTCTGTCCTTTCCCCAGATTCATTCTCTCTCTCTCTCTCTC  100

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACTC  150

seq1  TCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTTTCTCTCTCTCTCCCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTTTCTCTCTCTCTCCCCTCT  200

seq1  GTCTCATCCTGCCTCTCTCTCTCTCCTTCCCCTCTCATTCTCACTCTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATCCTGCCTCTCTCTCTCTCCTTCCCCTCTCATTCTCACTCTAAC  250

seq1  TATTGCTGAATTTCAAAGAAAATGACAATGATCTTAGGTCACCACAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTGAATTTCAAAGAAAATGACAATGATCTTAGGTCACCACAGCAG  300

seq1  TATAAGGTAAAATGACATCTACTCTGCTGTAAA  333
      |||||||||||||||||||||||||||||||||
seq2  TATAAGGTAAAATGACATCTACTCTGCTGTAAA  333

seq1: chr9_38823961_38825061
seq2: B6Ng01-181M07.g_74_1166

seq1  GGATAGGTAGTGAAGTTAGAGCAATAGATTCTGCACCCAGGAGTTGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGTAGTGAAGTTAGAGCAATAGATTCTGCACCCAGGAGTTGTGTT  50

seq1  ATATGTCTTGTTTTAAAGCATAAGAACTAAATGGTGTTTTCCATCCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTTGTTTTAAAGCATAAGAACTAAATGGTGTTTTCCATCCACAG  100

seq1  AACAAAGGTGGGAAGAGAAAGAGAACAACAGAGGTGGTCATTGTCAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGTGGGAAGAGAAAGAGAACAACAGAGGTGGTCATTGTCAGGTT  150

seq1  GGCTGAGCTCGCCACAGGGTGGTGGAGAGGAATCTCAGCTCCTGGAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGCTCGCCACAGGGTGGTGGAGAGGAATCTCAGCTCCTGGAATTC  200

seq1  CTGGGAAAAGCATCAGTTGGCAGTAAGTAGAGCTGACTGAAGCAGGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAAAGCATCAGTTGGCAGTAAGTAGAGCTGACTGAAGCAGGCAGC  250

seq1  TGTTGATCACATAGCCTAGCTGAGCACAGCAGAGCTCTTGAGAAAGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATCACATAGCCTAGCTGAGCACAGCAGAGCTCTTGAGAAAGATCA  300

seq1  AGCTTGTTTGTAAATGTACATGCTACAGGTATTTCCTGTGGCATTCAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTTTGTAAATGTACATGCTACAGGTATTTCCTGTGGCATTCAATA  350

seq1  TTTTTATTTGTTATTTAAGTTTAGTGTTTCAGTATTATATTACTAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTTGTTATTTAAGTTTAGTGTTTCAGTATTATATTACTAGGGAA  400

seq1  CTCCTTTTTGGTTCTTTCAATTGAGTGGACCATATTCCTCTTGCTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTTGGTTCTTTCAATTGAGTGGACCATATTCCTCTTGCTCTGTG  450

seq1  ATAAGCATTTTCTTCTTTCAATTTAGGAAATGTTCTTTTGTTTCTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATTTTCTTCTTTCAATTTAGGAAATGTTCTTTTGTTTCTGTGTG  500

seq1  CCTGCCTCCTCACATAGCTCCTTTGGTGTCTTTATATCTTGTTCCCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCCTCACATAGCTCCTTTGGTGTCTTTATATCTTGTTCCCCTCT  550

seq1  TAAATTTCCTGATAAACTTTTAAAATAATATTATGAAATAAACATTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCCTGATAAACTTTTAAAATAATATTATGAAATAAACATTTTTC  600

seq1  ATATACTTTTTTATCACATTTTTCCCATACATCTTCCCCCTGAACTGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTTTTTATCACATTTTTCCCATACATCTTCCCCCTGAACTGCAC  650

seq1  TGAAATTCAAGATTTTACCCCATACCTCTCTCTCTGAAAAATCAAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCAAGATTTTACCCCATACCTCTCTCTCTGAAAAATCAAACAAA  700

seq1  CAAACCCAAAAGTTAAGATAAAACAAAAAATGCAAAGTAGTTATTAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCAAAAGTTAAGATAAAACAAAAAATGCAAAGTAGTTATTAATTC  750

seq1  TATTTTGTGTTGGCTAACTCTTTCTGAGCATAAAGCCTGTCTGGAGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTGTTGGCTAACTCTTTCTGAGCATAAAGCCTGTCTGGAGTTTG  800

seq1  ATTGATATACCCAGTGTCTTTCTATAGAGGAGAAAAAAGTCCCGAGTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATACCCAGTGTCTTTCTATAGAGGAGAAAAAAGTCCCGAGTTTC  850

seq1  AGCCTTAGATTTGAACATGTTCCTTTAGTAAGTTTGACAAGTACGTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAGATTTGAACATGTTCCTTTAGTAAGTTTGACAAGTACGTTTTC  900

seq1  TGTGATTTTATTTGGGTTTCTTCTTCTATTAGTATATATTTCTTGCTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTTATTTGGGTTTCTTCTTCTATTAGTATATATTTCTTGCTTTT  950

seq1  GTAGTGTCCTATGGCTCTGTTCTT-AGGTTTTATTCGATTTATCATTTTC  999
      ||||||||||||||||||  |||| |||||||||||||||||||||||  
seq2  GTAGTGTCCTATGGCTCTTGTCTTAAGGTTTTATTCGATTTATCATTT--  998

seq1  TTTGAATTAGTG-ATATACTTCTACTTTGTCTTCAGTACCTGATAATATC  1048
       ||||| ||||| |||||  |||||||||   ||||||| |||| |||||
seq2  CTTGAA-TAGTGAATATAACTCTACTTTG--CTCAGTACTTGAT-ATATC  1044

seq1  TCTTAAATTTGATTCATTTTACTGGTATGGTTTTAATATT-ACATGTTTT  1097
      || ||||||||| |||||||||| | |||||||  ||||| |||||||| 
seq2  TC-TAAATTTGA-TCATTTTACT-GCATGGTTT--ATATTAACATGTTTG  1089

seq1  GTTA  1101
      ||||
seq2  GTTA  1093