BAC Information

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BAC

Clone NameB6Ng01-182B14
Chromosome9 (Build37)
Map Location 110,425,549 - 110,500,495
singlet/doubletdoublet
Overlap geneKif9, Setd2
Upstream geneLOC635668, Fbxw15, EG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1, Rn4.5s-ps2, Cspg5, Tmem103, Scap, Ptpn23, Ngp, Klhl18
Downstream geneNradd, Nbeal2, Ccdc12, Pthr1, Myl3, 9430025E04Rik, LOC665549, Tessp2, 1700036D21Rik, Tessp3, BC107230, 1700112C13Rik, Tsp50, Tmie, Als2cl, Gm590, Tdgf1, Lrrc2, Rtp3, ENSMUSG00000057802, Ltf, Ccrl2, LOC100039275, Lrrfip2, Mlh1, Epm2aip1, Lba1, Dclk3, LOC620615, Stac
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182B14.bB6Ng01-182B14.g
ACCGA008084GA008085
length8341,050
definitionB6Ng01-182B14.b B6Ng01-182B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,499,663 - 110,500,495)(110,425,549 - 110,426,596)
sequence
gaattcatccagcgtctaagaaataagcctcagtagttaggatcaaagcc
tttaaagccgccttaagtatccaaacgtatagcttaaactctccacaaag
gagcaaagaagaaactgtacacagtcttacaaagaagtgttcccagttaa
cactttcctgactgggctgtttttctgacaatggtccttgggtcatttcc
tatatgtactattattctctgcctctttgtaaacgtgagtccaaacgtcc
cttgaagagaaggtggtactgggataaaacctggcatttaaaatcgcagg
ttaataacaggagactgatctttcaatgagaatgcccctcgtcagaaaat
acttcctgatgtcacaagaacagggtaaatggagtaagcctgggctcaca
tcccaaaccagagtaaaataggaaacatatcatcaaagcgacttttaaaa
aacttaatatacactcagataataatcagaagtcaataaaaatacaagtt
accagaagcaaaagattgtctatgtttataagaagatataagccacaagt
tgctatgtatacaggcatacttttacatgctggtagtgctgacttcagct
taatgttatgcactaaccaaagtcagcaggctggttaactggatcttttg
tagccagcccagttaaacaccagatacctcacagagaacttgggggtggg
aggtgtgggaagagaataaaaatcaaaacaaaacaaaccacctggcttgc
cttcccaatctaatttagtagcataatctgctagctttgtcttctatagc
ctttcacatcgttatcatgtacaactaactaacc
taaatgctgagagatgtagctcagaaatagagcatttgcctttgtaagac
ctgtgtaaggccctgggttcaacgaaaggaggaaaagttccatcttgagc
caggtgttatgtcaaatccaataatctaaacacttgggggcagggtgctg
agggaggagtatcttgagttcaaggccatcttgggctatatattgagaca
ctatcccaagaaagaaaattccagcttagtgttggcattgcatgttcagc
ttcttatcttggggactttagagttcctttccatattttaagctagcttt
aacatttgctcctttcctgccccctgctttagtgacagcctttcctattc
actctcagggatcctagcagtgtattaaaagaatagaatttaactatcaa
aagaagacctctagaggaccagccccttcctgttagtttcctattgctgt
gactaatacctgggagtcacagcctaaaagtaggaaggattaagccattc
tgcctcttgagtgctggaagcaggagaatcaggagtccaaagttatcctt
atttgcataggaggttcaaggcaggcctgggcttcatggagaccctctct
agaaacaaacagaaatagaaacaaagggaaaaacaaagatgaaagattta
ctttacctcgtaaactggttccattgttataggcttatggtagcatcaga
agagcatggtggagagctgcttgtatcatcaacgcgctcaatctgagaag
gactggggtggatcaaggatatgataaacctatcagccataaaccccagt
gacctacatcctccaactgctcctacctcttgcgtcccaccaccttccac
taacgctatcaagttatgaatccaatggtggataaattcgttgattagct
ctcactttcctattacctctcatgatcagatctacccatggagactaagc
ttgcaacacaggaacctatatgctttaaggtattatagtatattaaagta
cttcatatccaaactatgtttggggtattattggtgtgaaagttgctctt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_110499663_110500495
seq2: B6Ng01-182B14.b_40_872 (reverse)

seq1  GTTAGTTAGTTGTACATGATATCGATGTGAAAGGCTATAGAAGACAAAGC  50
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTAGTTAGTTGTACATGATAACGATGTGAAAGGCTATAGAAGACAAAGC  50

seq1  TAGCAGATTTTGCTACTAAATTAGATTGGGAAGGCAAGCCAGGTGGTTTT  100
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  TAGCAGATTATGCTACTAAATTAGATTGGGAAGGCAAGCCAGGTGG-TTT  99

seq1  GTTTTGTTTTGATTTTT-TTCTCTTCCCACACCTCCCACCCCCAAGTTCT  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGATTTTTATTCTCTTCCCACACCTCCCACCCCCAAGTTCT  149

seq1  CTGTGAGGTATCTGGTGTTTAACTGGGCTGGCTACAAAAGATCCAGTTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGTATCTGGTGTTTAACTGGGCTGGCTACAAAAGATCCAGTTAA  199

seq1  CCAGCCTGCTGACTTTGGTTAGTGCATAACATTAAGCTGAAGTCAGCACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGCTGACTTTGGTTAGTGCATAACATTAAGCTGAAGTCAGCACT  249

seq1  ACCAGCATGTAAAAGTATGCCTGTATACATAGCAACTTGTGGCTTATATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCATGTAAAAGTATGCCTGTATACATAGCAACTTGTGGCTTATATC  299

seq1  TTCTTATAAACATAGACAATCTTTTGCTTCTGGTAACTTGTATTTTTATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATAAACATAGACAATCTTTTGCTTCTGGTAACTTGTATTTTTATT  349

seq1  GACTTCTGATTATTATCTGAGTGTATATTAAGTTTTTTAAAAGTCGCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTGATTATTATCTGAGTGTATATTAAGTTTTTTAAAAGTCGCTTT  399

seq1  GATGATATGTTTCCTATTTTACTCTGGTTTGGGATGTGAGCCCAGGCTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATATGTTTCCTATTTTACTCTGGTTTGGGATGTGAGCCCAGGCTTA  449

seq1  CTCCATTTACCCTGTTCTTGTGACATCAGGAAGTATTTTCTGACGAGGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTACCCTGTTCTTGTGACATCAGGAAGTATTTTCTGACGAGGGG  499

seq1  CATTCTCATTGAAAGATCAGTCTCCTGTTATTAACCTGCGATTTTAAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCATTGAAAGATCAGTCTCCTGTTATTAACCTGCGATTTTAAATG  549

seq1  CCAGGTTTTATCCCAGTACCACCTTCTCTTCAAGGGACGTTTGGACTCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTTTATCCCAGTACCACCTTCTCTTCAAGGGACGTTTGGACTCAC  599

seq1  GTTTACAAAGAGGCAGAGAATAATAGTACATATAGGAAATGACCCAAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAAAGAGGCAGAGAATAATAGTACATATAGGAAATGACCCAAGGA  649

seq1  CCATTGTCAGAAAAACAGCCCAGTCAGGAAAGTGTTAACTGGGAACACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTCAGAAAAACAGCCCAGTCAGGAAAGTGTTAACTGGGAACACTT  699

seq1  CTTTGTAAGACTGTGTACAGTTTCTTCTTTGCTCCTTTGTGGAGAGTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAAGACTGTGTACAGTTTCTTCTTTGCTCCTTTGTGGAGAGTTTA  749

seq1  AGCTATACGTTTGGATACTTAAGGCGGCTTTAAAGGCTTTGATCCTAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATACGTTTGGATACTTAAGGCGGCTTTAAAGGCTTTGATCCTAACT  799

seq1  ACTGAGGCTTATTTCTTAGACGCTGGATGAATTC  833
      ||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCTTATTTCTTAGACGCTGGATGAATTC  833

seq1: chr9_110425549_110426596
seq2: B6Ng01-182B14.g_79_1128

seq1  TAAATGCTGAGAGATGTAGCTCAGAAATAGAGCATTTGCCTTTGTAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTGAGAGATGTAGCTCAGAAATAGAGCATTTGCCTTTGTAAGAC  50

seq1  CTGTGTAAGGCCCTGGGTTCAACGAAAGGAGGAAAAGTTCCATCTTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAAGGCCCTGGGTTCAACGAAAGGAGGAAAAGTTCCATCTTGAGC  100

seq1  CAGGTGTTATGTCAAATCCAATAATCTAAACACTTGGGGGCAGGGTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTATGTCAAATCCAATAATCTAAACACTTGGGGGCAGGGTGCTG  150

seq1  AGGGAGGAGTATCTTGAGTTCAAGGCCATCTTGGGCTATATATTGAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAGTATCTTGAGTTCAAGGCCATCTTGGGCTATATATTGAGACA  200

seq1  CTATCCCAAGAAAGAAAATTCCAGCTTAGTGTTGGCATTGCATGTTCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCAAGAAAGAAAATTCCAGCTTAGTGTTGGCATTGCATGTTCAGC  250

seq1  TTCTTATCTTGGGGACTTTAGAGTTCCTTTCCATATTTTAAGCTAGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATCTTGGGGACTTTAGAGTTCCTTTCCATATTTTAAGCTAGCTTT  300

seq1  AACATTTGCTCCTTTCCTGCCCCCTGCTTTAGTGACAGCCTTTCCTATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGCTCCTTTCCTGCCCCCTGCTTTAGTGACAGCCTTTCCTATTC  350

seq1  ACTCTCAGGGATCCTAGCAGTGTATTAAAAGAATAGAATTTAACTATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAGGGATCCTAGCAGTGTATTAAAAGAATAGAATTTAACTATCAA  400

seq1  AAGAAGACCTCTAGAGGACCAGCCCCTTCCTGTTAGTTTCCTATTGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACCTCTAGAGGACCAGCCCCTTCCTGTTAGTTTCCTATTGCTGT  450

seq1  GACTAATACCTGGGAGTCACAGCCTAAAAGTAGGAAGGATTAAGCCATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATACCTGGGAGTCACAGCCTAAAAGTAGGAAGGATTAAGCCATTC  500

seq1  TGCCTCTTGAGTGCTGGAAGCAGGAGAATCAGGAGTCCAAAGTTATCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTGAGTGCTGGAAGCAGGAGAATCAGGAGTCCAAAGTTATCCTT  550

seq1  ATTTGCATAGGAGGTTCAAGGCAGGCCTGGGCTTCATGGAGACCCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATAGGAGGTTCAAGGCAGGCCTGGGCTTCATGGAGACCCTCTCT  600

seq1  AGAAACAAACAGAAATAGAAACAAAGGGAAAAACAAAGATGAAAGATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAACAGAAATAGAAACAAAGGGAAAAACAAAGATGAAAGATTTA  650

seq1  CTTTACCTCGTAAACTGGTTCCATTGTTATAGGCTTATGGTAGCATCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTCGTAAACTGGTTCCATTGTTATAGGCTTATGGTAGCATCAGA  700

seq1  AGAGCATGGTGGAGAGCTGCTTGTATCATCAACGCGCTCAATCTGAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGGTGGAGAGCTGCTTGTATCATCAACGCGCTCAATCTGAGAAG  750

seq1  GACTGGGGTGGATCAAGGATATGATAAACCTATCAGGCCAT-AACCCCAG  799
      ||||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  GACTGGGGTGGATCAAGGATATGATAAACCTATCA-GCCATAAACCCCAG  799

seq1  TGACCTACATCCTCCAACCTGCTCCTACCTCTTGCGTCCCACCACCTTCC  849
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGACCTACATCCTCCAA-CTGCTCCTACCTCTTGCGTCCCACCACCTTCC  848

seq1  ACTAACGCTATCAAGTTATGAATCCAATGGTGGATAAATTCGTTGATTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACGCTATCAAGTTATGAATCCAATGGTGGATAAATTCGTTGATTAG  898

seq1  CTCTCACTTTCCTATTACCTCTCAATGATCAGATCTACCCATGGAGACTA  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTCTCACTTTCCTATTACCTCTC-ATGATCAGATCTACCCATGGAGACTA  947

seq1  AGCTTGCAAACACAGGAACCTATATGCTTTAAGGTA-TATAGTATA-TAA  997
      ||||||| |||||||||||||||||||||||||||| ||||||||| |||
seq2  AGCTTGC-AACACAGGAACCTATATGCTTTAAGGTATTATAGTATATTAA  996

seq1  AGTACTTCATATCCAAACTATTGTTGGGGTA-TATT-GTGTGAAGGTTG-  1044
      |||||||||||||||||||||  |||||||| |||| ||||||| |||| 
seq2  AGTACTTCATATCCAAACTATGTTTGGGGTATTATTGGTGTGAAAGTTGC  1046

seq1  TCTT  1048
      ||||
seq2  TCTT  1050