MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-182L09
Chromosome	9 (Build37)
Map Location	76,238,672 - 76,430,976
singlet/doublet	doublet
Overlap gene	C530008M07Rik
Upstream gene	Mapk6, Leo1, EG666190, LOC100042070, Tmod3, Tmod2, Lysmd2, Scg3, LOC100042107, Bmp5, EG620071, Hmgcll1, Gfral, Hcrtr2
Downstream gene	Tinag, LOC436082, 2310046A06Rik, 5730403I07Rik, Lrrc1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mapk6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50772 MGI:1354946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Leo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235497 MGI:2685031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666190 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666190 MGI:3647337
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	LOC100042070 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tmod3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50875 MGI:1355315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50876 MGI:1355335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lysmd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70082 MGI:1917332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scg3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20255 MGI:103032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042107 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 282 ESTs, 17 Proteins pseudo : _no_value

name	Bmp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12160 MGI:88181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG620071 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620071 MGI:3647285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Hmgcll1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208982 MGI:2446108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gfral (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404194 MGI:3607786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hcrtr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:387285 MGI:2680765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C530008M07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208994 MGI:2685362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tinag (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26944 MGI:1349477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC436082 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	2310046A06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69642 MGI:1916892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 3 Proteins

name	5730403I07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70487 MGI:1917737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs

name	Lrrc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214345 MGI:2442313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mapk6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76573878 GeneID:50772 MGI:1354946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 6 transcript_id : NM_015806.4

name	Mapk6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76573875 GeneID:50772 MGI:1354946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 6 transcript_id : NM_027418.1

name	Leo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299618 GeneID:235497 MGI:2685031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) transcript_id : NM_001039522.1

name	EG666190 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260031 GeneID:666190 MGI:3647337
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG666190 transcript_id : XM_001475415.1

name	LOC100042070 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260077 GeneID:100042070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042070 transcript_id : XM_001478508.1

name	Tmod3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84697033 GeneID:50875 MGI:1355315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomodulin 3 transcript_id : NM_016963.2

name	Tmod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84697032 GeneID:50876 MGI:1355335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomodulin 2 transcript_id : NM_016711.3

name	Tmod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84697030 GeneID:50876 MGI:1355335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomodulin 2 transcript_id : NM_001038710.1

name	Lysmd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130490960 GeneID:70082 MGI:1917332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LysM, putative peptidoglycan-binding, domain containing 2 transcript_id : NM_027309.2

name	Scg3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375169 GeneID:20255 MGI:103032
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secretogranin III transcript_id : NM_009130.2

name	Bmp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374687 GeneID:12160 MGI:88181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bone morphogenetic protein 5 transcript_id : NM_007555.3

name	EG620071 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82931764 GeneID:620071 MGI:3647285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG620071 transcript_id : XM_884461.1

name	Hmgcll1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130046 GeneID:208982 MGI:2446108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 transcript_id : NM_173731.2

name	Gfral (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112821668 GeneID:404194 MGI:3607786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GDNF family receptor alpha like transcript_id : NM_205844.3

name	Hcrtr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357036 GeneID:387285 MGI:2680765
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypocretin (orexin) receptor 2 transcript_id : NM_198962.2

name	C530008M07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113931643 GeneID:208994 MGI:2685362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C530008M07 gene transcript_id : NM_001045518.1

name	Tinag (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981313 GeneID:26944 MGI:1349477
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulointerstitial nephritis antigen transcript_id : NM_012033.2

name	2310046A06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260082 GeneID:69642 MGI:1916892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 2 Proteins product : RIKEN cDNA 2310046A06 gene transcript_id : XM_001478691.1

name	2310046A06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260080 GeneID:69642 MGI:1916892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 1 Protein product : RIKEN cDNA 2310046A06 gene transcript_id : XM_001478683.1

name	5730403I07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386241 GeneID:70487 MGI:1917737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs product : RIKEN cDNA 5730403I07 gene transcript_id : XM_489285.3

name	Lrrc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982081 GeneID:214345 MGI:2442313
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 1 transcript_id : NM_172528.2

name	Mapk6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76573879 CCDS:CCDS23342.1 GeneID:50772 MGI:1354946
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase, mitogen activated kinase 4; mitogen activated protein kinase 4; Erk-3 related product : mitogen-activated protein kinase 6 protein_id : NP_056621.4

name	Mapk6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76573876 CCDS:CCDS23342.1 GeneID:50772 MGI:1354946
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase, mitogen activated kinase 4; mitogen activated protein kinase 4; Erk-3 related product : mitogen-activated protein kinase 6 protein_id : NP_081694.1

name	Leo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87299619 CCDS:CCDS23343.1 GeneID:235497 MGI:2685031
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : Leo1, Paf1/RNA polymerase II complex component, homolog protein_id : NP_001034611.1

name	EG666190 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260032 GeneID:666190 MGI:3647337
definition	codon_start : 1 product : similar to Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) protein_id : XP_001475465.1

name	LOC100042070 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260078 GeneID:100042070
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478558.1

name	Tmod3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394460 CCDS:CCDS23344.1 GeneID:50875 MGI:1355315
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0031941 - filamentous actin [Evidence ISS]; GO:0030027 - lamellipodium [Evidence ISS]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0051011 - microtubule minus-end binding [Evidence ISS]; GO:0005523 - tropomyosin binding [Evidence IEA] GO_process : GO:0051271 - negative regulation of cell motility [Evidence ISS]; GO:0051694 - pointed-end actin filament capping [Evidence ISS] codon_start : 1 note : ubiquitous tropomodulin product : tropomodulin 3 protein_id : NP_058659.1

name	Tmod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84697031 CCDS:CCDS23345.1 GeneID:50876 MGI:1355335
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005523 - tropomyosin binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007611 - learning and/or memory [Evidence IMP]; GO:0007270 - nerve-nerve synaptic transmission [Evidence IMP]; GO:0045745 - positive regulation of G-protein coupled receptor protein signaling pathway [Evidence IMP] codon_start : 1 note : neural tropomodulin product : tropomodulin 2 protein_id : NP_001033799.1

name	Tmod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543876 CCDS:CCDS23345.1 GeneID:50876 MGI:1355335
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005523 - tropomyosin binding [Evidence ISS] [Evidence IEA] GO_process : GO:0007611 - learning and/or memory [Evidence IMP]; GO:0007270 - nerve-nerve synaptic transmission [Evidence IMP]; GO:0045745 - positive regulation of G-protein coupled receptor protein signaling pathway [Evidence IMP] codon_start : 1 note : neural tropomodulin product : tropomodulin 2 protein_id : NP_057920.2

name	Lysmd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:130490961 GeneID:70082 MGI:1917332
definition	GO_process : GO:0016998 - cell wall catabolism [Evidence IEA] codon_start : 1 product : LysM, putative peptidoglycan-binding, domain containing 2 protein_id : NP_081585.2

name	Scg3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677867 CCDS:CCDS23347.1 GeneID:20255 MGI:103032
definition	codon_start : 1 product : secretogranin III protein_id : NP_033156.1

name	Bmp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792782 CCDS:CCDS23348.1 GeneID:12160 MGI:88181
definition	GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0040007 - growth [Evidence IEA]; GO:0001503 - ossification [Evidence IEA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001501 - skeletal development [Evidence IMP]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IEA] codon_start : 1 note : short ear product : bone morphogenetic protein 5 protein_id : NP_031581.2

name	EG620071 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82931765 GeneID:620071 MGI:3647285
definition	codon_start : 1 product : similar to Chain C, Structure Of A Hif-1a-Pvhl-Elonginb-Elonginc Complex protein_id : XP_889554.1

name	Hmgcll1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239379 CCDS:CCDS23349.1 GeneID:208982 MGI:2446108
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA] codon_start : 1 product : 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 protein_id : NP_776092.1

name	Gfral (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48762515 GeneID:404194 MGI:3607786
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0031098 - stress-activated protein kinase signaling pathway [Evidence IDA] codon_start : 1 product : GDNF receptor alpha-like protein_id : NP_995316.2

name	Hcrtr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42821120 CCDS:CCDS23350.1 GeneID:387285 MGI:2680765
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016499 - orexin receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007200 - G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : hypocretin (orexin) receptor 2 protein_id : NP_945200.1

name	C530008M07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113931644 GeneID:208994 MGI:2685362
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 product : hypothetical protein LOC208994 protein_id : NP_001038983.1

name	Tinag (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981314 CCDS:CCDS23351.1 GeneID:26944 MGI:1349477
definition	codon_start : 1 exception : mismatches in translation product : tubulointerstitial nephritis antigen protein_id : NP_036163.2

name	2310046A06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260083 GeneID:69642 MGI:1916892
definition	codon_start : 1 product : hypothetical protein LOC69642 protein_id : XP_001478741.1

name	2310046A06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260081 GeneID:69642 MGI:1916892
definition	codon_start : 1 product : hypothetical protein LOC69642 protein_id : XP_001478733.1

name	5730403I07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82923141 GeneID:70487 MGI:1917737
definition	codon_start : 1 product : hypothetical protein LOC70487 protein_id : XP_489285.2

name	Lrrc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982082 GeneID:214345 MGI:2442313
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : leucine rich repeat containing 1 protein_id : NP_766116.2

name	LOC100042107 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260079 GeneID:100042107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 282 ESTs, 17 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_033791.1

name	LOC436082 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260037 GeneID:436082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to ADAM4 pseudo : _no_value transcript_id : XR_032309.1

clone name	MSMg01-509F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-478H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075L20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-419H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453F08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197L14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-182L09.b	B6Ng01-182L09.g
ACC	GA008531	GA008532
length	884	952
definition	B6Ng01-182L09.b	B6Ng01-182L09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(76,430,097 - 76,430,976)	(76,238,672 - 76,239,601)
sequence	gaattcaggaaaataaaatgtcttgtgttttaaatctggattaaccatag tagtctcaaaacagaaaagggtgaatgacaaatgtcgaatagtctaaatt gataacactgtttgagaaggcctaggaggtatggctttattgaaggaagt ctgttactggggttgaactttgaagtttcaaagccctgtgtcatttccag tgtgctctctctctgcttcctgcttatggttcaagatataagatctggat ccaaataaaattagagcatccttacgtttatttttctgaatatatccagt agatatatacagaagttcataaaactctgcctctgccctgccaccatgga ttttaaccccgtgcaactataagcataaataactatttttttttttacct tttaagttcctttgattatggtgttttattacagtaatataaaactgact aatatggggagatgttactaaataagtgttggaagattaatatatgtaga tagcgcagaattaagagggaaattgggtattagagtgaagggattagagg aaatggacttgatagcaacacagaagtaaaataggcacccaaactcctca tgtcttctgtgaattattttgtgtaacttgaatttccagaaccttgaaaa atcctgtgtttggaataatattgattcacttgacctatttgtttttaaat cacattgtaataggaaagaaagatgagtgaataaatgcaccatgttttta gatatgggaaaaagttagtttaatcgtgggagaaggacacgggggcacaa agtgatggtgcaaatgtctgttagacacacatgaaagtcaacaccagaca agtcctgagtgaaaaaactggtgggaagaaagct	gaattccatatgatttgtttatagttatttgataatctatattatctttt cattatcattgttatttcatgatgtaaagaaactagatgtcaaaagaaag agggattaaggtaatgggctaccactaggtggcagtagcaacagatggtg gaagagcactcaggtgtatgaccaacatagtcagttgggttcgaacaaaa gtcctcaggctgtgaaacctaagctggggctgtagaggggactggacttt gggtaaaagggaagaatgtctgaagggtatatgagtctaggtcagataga gcattgagtggcttttggggcatttaaaaaagcagtatcttaatttctct ttcatgtagttcattgttgtttggtatgcttaaggataaacttaactgag aaaaataataaggaaaaacaccctgatgaagctcaagttacaaatttctg taaaagtatctcattctcatggatagaagagtaaataaatattaagatgt ccacactagccaagtggtttacaaactcaaaacagtccctgttaaaaaca caagacccagttgtttctcataagcaggaaagatacttgaagttcacaag aaacacccaagtagtcaacacactagttttgattaaagaacaaaaatgaa gacattaccttactgatttcaaaatccacagaggtaatgaaaacatgtga tgcaggcataaaagcagtaatatagaccaacagaaagaaaacagaaagcc cagagaatgagccatataactcatgaccagctgccttaaagaggcaatga gacacccatgcagaaagaatagataacatactaaacattagtcttacagg gcaccttgaaatcttctcaacattgacttaaacacaacaacaagaaacat aaacattaaagtacaaggcatgaaactccttgatgactgttttctaaaca tg
quality values	Open. Hide. 58 33 35 34 58 25 21 58 58 36 58 58 39 35 58 58 62 46 41 41 47 62 62 62 54 62 62 62 62 62 47 62 62 62 62 62 62 62 62 47 44 49 62 62 62 54 47 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 49 47 62 62 62 56 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 43 47 62 62 62 56 62 62 46 62 62 62 41 41 62 62 62 62 62 56 62 62 47 62 62 62 62 62 62 62 43 62 62 43 42 62 62 62 62 52 62 62 62 52 43 62 62 62 50 54 62 52 62 52 54 54 54 52 48 54 30 52 54 52 58 58 42 54 42 58 45 54 54 58 52 48 46 42 52 52 45 30 47 35 42 46 52 58 52 54 49 50 58 35 54 46 38 42 52 54 42 54 54 42 42 58 42 41 58 58 52 54 39 58 34 38 54 42 30 8 12 47 58 52 58 54 46 54 42 52 58 48 37 51 31 46 50 50 48 47 47 37 50 49 48 38 51 46 41 33 42 50 50 50 32 58 32 41 54 46 52 43 51 50 52 41 34 34 29 39 32 33 48 16 39 54 29 40 36 58 46 39 29 50 50 50 37 14 49 38 50 50 29 39 28 47 51 49 32 48 50 52 40 51 17 46 49 41 20 30 50 41 32 32 29 39 43 6 25 42 30 31 33 10 28 41 39 52 39 18 50 49 37 32 52 33 52 23 24 15 12 13 34 31 28 24 24 18 11 10 11 27 50 28 13 9 30 34 22 14 6 16 9 30 29 52 29 32 30 41 16 21 7 24 32 25 18 20 34 29 41 13 30 39 21 20 17 30 32 31 31 32 31 35 34 26 20 35 16 19 40 32 25 25 19 33 25 21 28 23 17 23 35 29 12 32 27 26 25 10 22 13 28 13 33 31 29 8 24 25 19 30 31 36 12 28 26 11 30 9 30 26 6 9 12 15 26 26 29 7 21 15 22 47 32 34 34 24 23 26 31 19 21 17 13 15 18 18 31 31 32 9 9 14 9	Open. Hide. 62 49 35 39 62 62 47 26 62 62 62 62 47 47 62 62 37 38 49 47 56 62 47 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 59 62 62 62 62 62 49 49 49 59 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 54 62 62 62 43 62 62 54 54 52 58 52 58 58 58 54 58 38 42 58 58 58 58 58 54 58 54 52 54 50 58 54 54 58 58 32 58 58 58 54 47 58 54 58 58 58 58 58 58 54 52 58 58 58 58 54 46 54 35 54 49 54 33 58 46 39 52 58 58 58 58 58 58 54 54 52 46 54 54 58 54 58 54 42 58 58 39 58 50 52 46 50 48 54 54 52 29 20 28 46 49 38 25 50 52 52 42 49 58 51 52 32 47 58 37 35 51 49 40 50 50 51 51 50 49 50 50 51 51 54 53 52 52 51 58 58 58 42 46 32 53 41 58 46 39 58 44 37 32 49 58 58 40 53 53 53 53 40 49 46 33 53 50 33 54 49 51 43 34 48 50 51 50 40 58 43 40 39 58 58 36 49 39 34 39 53 39 25 28 18 51 49 39 39 40 47 49 58 58 32 47 29 49 49 52 51 49 38 50 40 39 23 58 33 37 52 24 58 58 49 35 51 32 29 53 49 30 49 37 52 42 38 24 19 32 16 33 49 25 19 30 51 29 24 51 50 49 31 44 21 39 53 47 25 24 17 44 20 14 21 27 14 28 34 25 52 41 23 35 54 29 52 52 47 24 33 21 42 34 30 35 45 37 31 47 20 31 33 36 33 14 47 37 28 37 54 31 32 37 7 47 25 24 29 38 37 14 11 29 35 17 12 42 9 7 25 34 33 21 18 38 49 29 32 32 53 40 25 19 16 21 23 41 26 21 31 32 33 23 8 49 32 15 10 24 31 33 9 31 37 35 32 22 28 17 29 37 8 5 11 18 32 20 51 45 30 51 29 31 31 29 18 11 8 17 18 21 31 28 35 19 29 26 27 31 51 23 46 18 28 6 30 6 7 31 12 16 32 26 18 20 29 46 27 31 32 32 14 40 33 38 41 9 21 10 40 36 31 20 10 35 27 34 15 19 25 20 27 26 18 46 32 31 33 20 27 12 31 37 32 31 31 36 27 12 7 7 28 47 11 38 21 43 39 22 14 9 31 32

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_76430097_76430976
seq2: B6Ng01-182L09.b_43_926 (reverse)

seq1  AGCTTTCTTTCCCACCAG-TTTTTCACTCAGGACTTGTCTGTTGTTGACT  49
      ||||||| |||||||||| |||||||||||||||||||||| ||||||||
seq2  AGCTTTC-TTCCCACCAGTTTTTTCACTCAGGACTTGTCTGGTGTTGACT  49

seq1  TTCATGTGTGTCTAACAGACATTTGCACCATCACTTTGTG-CCCCGTGTC  98
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCATGTGTGTCTAACAGACATTTGCACCATCACTTTGTGCCCCCGTGTC  99

seq1  CTTCT-CCACGATTAAACTAACTTTTT-CCATATCTAAAAACATGGTGCA  146
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCTCCCACGATTAAACTAACTTTTTCCCATATCTAAAAACATGGTGCA  149

seq1  TTTATTCACTCATCTTTCTTTCCTATTACAATGTGATTTAAAAACAAATA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCACTCATCTTTCTTTCCTATTACAATGTGATTTAAAAACAAATA  199

seq1  GGTCAAGTGAATCAATATTATTCCAAACACAGGATTTTTCAAGGTTCTGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGTGAATCAATATTATTCCAAACACAGGATTTTTCAAGGTTCTGG  249

seq1  AAATTC-AGTTACACAAAATAATTCACAGAAGACATGAGGAGTTTGGGTG  295
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGTTACACAAAATAATTCACAGAAGACATGAGGAGTTTGGGTG  299

seq1  CCTATTTTACTTCTGTGTTGCTATCAAGTCCATTTCCTCTAATCCCTTCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTACTTCTGTGTTGCTATCAAGTCCATTTCCTCTAATCCCTTCA  349

seq1  CTCTAATACCCAATTTCCCTCTTAATTCTGCGCTATCTACATATATTAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATACCCAATTTCCCTCTTAATTCTGCGCTATCTACATATATTAAT  399

seq1  CTTCCAACACTTATTTAGTAACATCTCCCCATATTAGTCAGTTTTATATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAACACTTATTTAGTAACATCTCCCCATATTAGTCAGTTTTATATT  449

seq1  ACTGTAATAAAACACCATAATCAAAGGAACTTAAAAGGTAAAAAAAAAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAATAAAACACCATAATCAAAGGAACTTAAAAGGTAAAAAAAAAAA  499

seq1  TAGTTATTTATGCTTATAGTTGCACGGGGTTAAAATCCATGGTGGCAGGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATTTATGCTTATAGTTGCACGGGGTTAAAATCCATGGTGGCAGGG  549

seq1  CAGAGGCAGAGTTTTATGAACTTCTGTATATATCTACTGGATATATTCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGAGTTTTATGAACTTCTGTATATATCTACTGGATATATTCAG  599

seq1  AAAAATAAACGTAAGGATGCTCTAATTTTATTTGGATCCAGATCTTATAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAACGTAAGGATGCTCTAATTTTATTTGGATCCAGATCTTATAT  649

seq1  CTTGAACCATAAGCAGGAAGCAGAGAGAGAGCACACTGGAAATGACACAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACCATAAGCAGGAAGCAGAGAGAGAGCACACTGGAAATGACACAG  699

seq1  GGCTTTGAAACTTCAAAGTTCAACCCCAGTAACAGACTTCCTTCAATAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGAAACTTCAAAGTTCAACCCCAGTAACAGACTTCCTTCAATAAA  749

seq1  GCCATACCTCCTAGGCCTTCTCAAACAGTGTTATCAATTTAGACTATTCG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACCTCCTAGGCCTTCTCAAACAGTGTTATCAATTTAGACTATTCG  799

seq1  ACATTTGTCATTCACCCTTTTCTGTTTTGAGACTACTATGGTTAATCCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTCATTCACCCTTTTCTGTTTTGAGACTACTATGGTTAATCCAG  849

seq1  ATTTAAAACACAAGACATTTTATTTTCCTGAATTC  880
      |||||||||||||||||||||||||||||||||||
seq2  ATTTAAAACACAAGACATTTTATTTTCCTGAATTC  884

seq1: chr9_76238672_76239601
seq2: B6Ng01-182L09.g_63_990

seq1  GAATTCCATATGATTTGTTTATAGTTATTTGATAATCTATATTATCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATGATTTGTTTATAGTTATTTGATAATCTATATTATCTTTT  50

seq1  CATTATCATTGTTATTTCATGATGTAAAGAAACTAGATGTCAAAAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCATTGTTATTTCATGATGTAAAGAAACTAGATGTCAAAAGAAAG  100

seq1  AGGGATTAAGGTAATGGGCTACCACTAGGTGGCAGTAGCAACAGATGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTAAGGTAATGGGCTACCACTAGGTGGCAGTAGCAACAGATGGTG  150

seq1  GAAGAGCACTCAGGTGTATGACCAACATAGTCAGTTGGGTTCGAACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCACTCAGGTGTATGACCAACATAGTCAGTTGGGTTCGAACAAAA  200

seq1  GTCCTCAGGCTGTGAAACCTAAGCTGGGGCTGTAGAGGGGACTGGACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGGCTGTGAAACCTAAGCTGGGGCTGTAGAGGGGACTGGACTTT  250

seq1  GGGTAAAAGGGAAGAATGTCTGAAGGGTATATGAGTCTAGGTCAGATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAAGGGAAGAATGTCTGAAGGGTATATGAGTCTAGGTCAGATAGA  300

seq1  GCATTGAGTGGCTTTTGGGGCATTTAAAAAAGCAGTATCTTAATTTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGAGTGGCTTTTGGGGCATTTAAAAAAGCAGTATCTTAATTTCTCT  350

seq1  TTCATGTAGTTCATTGTTGTTTGGTATGCTTAAGGATAAACTTAACTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTAGTTCATTGTTGTTTGGTATGCTTAAGGATAAACTTAACTGAG  400

seq1  AAAAATAATAAGGAAAAACACCCTGATGAAGCTCAAGTTACAAATTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATAAGGAAAAACACCCTGATGAAGCTCAAGTTACAAATTTCTG  450

seq1  TAAAAGTATCTCATTCTCATGGATAGAAGAGTAAATAAATATTAAGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTATCTCATTCTCATGGATAGAAGAGTAAATAAATATTAAGATGT  500

seq1  CCACACTAGCCAAGTGGTTTACAAACTCAAAACAGTCCCTGTTAAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTAGCCAAGTGGTTTACAAACTCAAAACAGTCCCTGTTAAAAACA  550

seq1  CAAGACCCAGTTGTTTCTCATAAGCAGGAAAGATACTTGAAGTTCACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCCAGTTGTTTCTCATAAGCAGGAAAGATACTTGAAGTTCACAAG  600

seq1  AAACACCCAAGTAGTCAACACACTAGTTTTGATTAAAGAACAAAAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCCAAGTAGTCAACACACTAGTTTTGATTAAAGAACAAAAATGAA  650

seq1  GACATTACCTTACTGATTTCAAAATCCACAGAGGTAATGAAAACATGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTACCTTACTGATTTCAAAATCCACAGAGGTAATGAAAACATGTGA  700

seq1  TGCAGGCATAAAAGCAGTAATATAGACCAACAG-AAGAAAACAGAAAGCC  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCAGGCATAAAAGCAGTAATATAGACCAACAGAAAGAAAACAGAAAGCC  750

seq1  CAGAGAATGAGCCATATAACTCATGACCAGCTGCCTTAAAGAGGCAATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATGAGCCATATAACTCATGACCAGCTGCCTTAAAGAGGCAATGA  800

seq1  GACA-CCATGCAGAAAGAATAGATAACATACTAAACATTAGTCTTACAGG  848
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCATGCAGAAAGAATAGATAACATACTAAACATTAGTCTTACAGG  850

seq1  GCACCTTGAAATCTTCTCAACATTGACTTAAACACAACAACAAAGAAACA  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  GCACCTTGAAATCTTCTCAACATTGACTTAAACACAACAAC-AAGAAAC-  898

seq1  ATAAAACAATAAAAGTACAAAGCATGAAACTC  930
      |||||   || ||||||||| |||||||||||
seq2  ATAAA--CATTAAAGTACAAGGCATGAAACTC  928

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information