BAC Information

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BAC

Clone NameB6Ng01-183C11
Chromosome9 (Build37)
Map Location 37,905,334 - 37,905,795
singlet/doubletsinglet
Overlap genenone
Upstream genePknox2, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887
Downstream geneOlfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183C11.bB6Ng01-183C11.g
ACCGA008856GA008857
length4561,216
definitionB6Ng01-183C11.b B6Ng01-183C11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggaccaggaaagggagtgggttggttgtggagcagggtcagagggaag
ggataggggattttcggagggaaaattaggaaagggtataatatttgaaa
tgtaaataaataaaatatctaaaaaataaaaaaaaatattgacattgtaa
aataaaatagttcaaaccttaaaaaaagactctgaaactttggaaagatg
aaattttatgtaaagaaatttgattttagttcggtgaatgataatttcac
atagataagtggcagttttctaaagtgacttatgttgtttacctgaaaga
gggattgatgcactgtgactgggagaacaaaaaagttaggtgtagtgaac
acaaatatatccttcttgagaaagaaaggattattttcaaaatgccatct
gaacactgatagaagaaaaagaagaaggaggaggaggaggaggaggagga
ggagga
gaattccaagcccatggtcggctcaaggattacctagggcactgatgaag
gccaggaagcaaagttcgattttgcttaggtatttggcaagtcattgctt
ggaggcacctataacaaaacaatactgaaaggaagcacacagatgctatg
ggatgccgcagttccaggagactaagtttccatgaaactcttcgcctcgg
gactgcttccaggtttctaaacttgtcaagcaggtcactactggagtgaa
tgtagcagacaggtactgggaagaaggcatgtgctagatcaatagctgca
taccaggagatgtattaatttgctctagtaatgaaactacatctggtaaa
gcagctgcaaacagagttactaccagatttacttttccatagttaactgt
cattctccatgatccatctgtcttctgcactgaccagataagagagttaa
aaggagatgtggtgggaactacccctgcatctttcaagccttggatggtg
gggttaatttctataattcctccagaaattcaatactgttcatgattcac
tattttctttgaaagaggcaactctaaaggcttccatttagcctgaccag
ccataatagccctcactccacaggctagggaaagagtgtgagaatcctgc
caatttctatgtatactgatcccaattatacattctgcaactggggaaat
gaccacaggatgtggtcatggaggtactggacctactgtgagtcagacat
cattaatcacctgtccttaataagcccctatattaactggagggccacaa
tatttcttgggatttcctgagaaacaacgtcaattcagaaccagaataca
atatattctggaaaatctgattattttctttcccccagtgtagttacttt
tctaaaaagccataggtttctctgcgcaagaactggagaaaggctaacag
caaaactatttagatgtcttatcaacatccttcctcagaggaacacagac
accacttcatttcaaggggttcttgagtctcaacggctcaagtccgcaaa
ttgattccactggtcaagattgcccttttgcatgatcaatgcagcctctc
tcttttcatgtttgagaattttttcctgcttatatagaatcaacagaata
tgccaattaagctcaatctatcatggccttggaaaaccccagctgacacc
tcgtgatgtatgagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37905334_37905795
seq2: B6Ng01-183C11.b_44_505

seq1  GAATTCCAGGACCAGGAAAGGGAGTGGGTTGGTTGTGGAGCAGGGTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACCAGGAAAGGGAGTGGGTTGGTTGTGGAGCAGGGTCAGA  50

seq1  GGGAAGGGATAGGGGATTTTCGGAGGGAAAATTAGGAAAGGGTATAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGATAGGGGATTTTCGGAGGGAAAATTAGGAAAGGGTATAATAT  100

seq1  TTGAAATGTAAATAAATAAAATATCTAAAAAATAAAAAAAAATATTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTAAATAAATAAAATATCTAAAAAATAAAAAAAAATATTGACA  150

seq1  TTGTAAAATAAAATAGTTCAAACCTTAAAAAAAGACTCTGAAACTTTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATAAAATAGTTCAAACCTTAAAAAAAGACTCTGAAACTTTGGA  200

seq1  AAGATGAAATTTTATGTAAAGAAATTTGATTTTAGTTCGGTGAATGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAATTTTATGTAAAGAAATTTGATTTTAGTTCGGTGAATGATAA  250

seq1  TTTCACATAGATAAGTGGCAGTTTTCTAAAGTGACTTATGTTGTTTACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACATAGATAAGTGGCAGTTTTCTAAAGTGACTTATGTTGTTTACCT  300

seq1  GAAAGAGGGATTGATGCACTGTGACTGGGAGAACAAAAAAGTTAGGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGGATTGATGCACTGTGACTGGGAGAACAAAAAAGTTAGGTGTA  350

seq1  GTGAACACAAATATATCCTTCTTGAGAAAGAAAGGATTATTTTCAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACACAAATATATCCTTCTTGAGAAAGAAAGGATTATTTTCAAAATG  400

seq1  CCATCTGAACACTGATAGAAGAAAAAGAAGAAGGAGGAGGAGGAGGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGAACACTGATAGAAGAAAAAGAAGAAGGAGGAGGAGGAGGAGGA  450

seq1  GGAGGAGGAGGA  462
      ||||||||||||
seq2  GGAGGAGGAGGA  462