BAC Information

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BAC

Clone NameB6Ng01-183E08
Chromosome9 (Build37)
Map Location 38,711,277 - 38,712,360
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1
Downstream geneGA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183E08.bB6Ng01-183E08.g
ACCGA008944GA008945
length1,0811,087
definitionB6Ng01-183E08.b B6Ng01-183E08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcatctttccaagacttttatcatgaatgggtgtgggatcttg
ttgaatgctttttctgcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatgtattacattgatggatttatgtatattaaacc
atctctgcatccctggaataaaacctacttagtcaggaaggatgattgtt
ttaatgtgacttggattcagttagcgagaattttattgagtatttttcat
cgatattcgtaagggaaattggtctgaagttctctatcttttttggatct
ttttgcggtttaggtatctgagtaattgtggcttcatggaatgagttggg
tagagtactttctacttctgttttgtggaatagtttgtgaagaactggaa
ttagatcttctttgaaggtctgatagaaccctgcactaaacccatctggt
cctgggcatttttggctgggagtctattaatgactgcttctattttttta
ggatatgggactgtttagatcattaacttgatcctggtttaactttggta
cctggtatctgtctagaaatttgtccatttcgtccaggttttccagtttt
tttgagtatagccttttgtagaaggatctgatggtgttttggatttcttc
aggatctgttgttatgtctcccttttcatttctgatttttgttaattagg
atgctgttcctgtgccctctagtgagtctagctaagggtttatctatctt
gttgattttctcaaagaaccagctccttgtttgggttgattctttgaata
gttcttgtttccacttgggttgatttcgttcctgagtttgattatttcct
gacatctactcctccttggggtgaattttccttactttttttcctagaag
ctttttagagattggtcaaaggtgctagtgtgtgttctctcttaatttct
ttttgggaggtcactctgaagcttagtgaggttttccaccgtgaatggtg
ggctttttccatttattaatggttgttatttgaaaatcagcccttattcc
ctggcgattgtgttggatgcatggggaacca
gaattctcaaatataccaagggatcccaaaatagacttgaataaggcaaa
acttaatacttgaatgactcaacatgatttttacaattagtgtataaagt
tgacaaaacagtaacacaattcctatagtatttttactgttctagaaatt
catttttaactttttagacatataatataaaaatttattcatggtaagtt
gaagtacatgaaactgcacatatttaagaagcacaaaaataacttaggac
acaattataagttttgtaactattgccatcaaaatgacaaatagttgatg
atattttatgactctttttttttttaatttttgcccatagacaattgctg
atattcacactttcatagtggactggaaattgtcagttctatcatttcat
ttaaataagcattttattaatatatgtttctcttttctttatcaaaccta
atcagttatatgtttatctataaatccatttttattgtttagaatacaat
ttatgtatggactttacagtgtattcacttaggtaatggtgatcattagg
gtcttttagtctattacaaatgaagatgctatctattccgtagtgttatg
gtgatatatatatatatatatatatacatatatatatataatttaaacaa
atatctagtttaaatacttgtatattatgttaagtgatctcttagtcatt
catctaactttcaacctacttccaaatatggtaaattttaaacttttaac
acttatggataaaagatacagttggtttgcatttaaaggcaaaacttcat
ttcatgatttttaattttattagttttaatgtatgcctagtctatgcttt
taaatttgcttctccagtgataaaatatggaaaatgtatttttatgtact
ttgtgctcatattttatcctacagttttatttctataaataaacacaaac
tagcaattaaatcaggaaggattgcctcatagaaccccacttatatcttg
tatgatttgcttatgagtaaattcaaatagaatttaattctcctatatta
taataacatagtaccattacataatgaacttctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38711277_38712360
seq2: B6Ng01-183E08.g_66_1152

seq1  GAATTCTCAAATATACCAAGGGATCCCAAAATAGACTTGAATAAGGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATATACCAAGGGATCCCAAAATAGACTTGAATAAGGCAAA  50

seq1  ACTTAATACTTGAATGACTCAACATGATTTTTACAATTAGTGTATAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATACTTGAATGACTCAACATGATTTTTACAATTAGTGTATAAAGT  100

seq1  TGACAAAACAGTAACACAATTCCTATAGTATTTTTACTGTTCTAGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAACAGTAACACAATTCCTATAGTATTTTTACTGTTCTAGAAATT  150

seq1  CATTTTTAACTTTTTAGACATATAATATAAAAATTTATTCATGGTAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAACTTTTTAGACATATAATATAAAAATTTATTCATGGTAAGTT  200

seq1  GAAGTACATGAAACTGCACATATTTAAGAAGCACAAAAATAACTTAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACATGAAACTGCACATATTTAAGAAGCACAAAAATAACTTAGGAC  250

seq1  ACAATTATAAGTTTTGTAACTATTGCCATCAAAATGACAAATAGTTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTATAAGTTTTGTAACTATTGCCATCAAAATGACAAATAGTTGATG  300

seq1  ATATTTTATGACTCTTTTTTTTTTTAATTTTTGCCCATAGACAATTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATGACTCTTTTTTTTTTTAATTTTTGCCCATAGACAATTGCTG  350

seq1  ATATTCACACTTTCATAGTGGACTGGAAATTGTCAGTTCTATCATTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACACTTTCATAGTGGACTGGAAATTGTCAGTTCTATCATTTCAT  400

seq1  TTAAATAAGCATTTTATTAATATATGTTTCTCTTTTCTTTATCAAACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAGCATTTTATTAATATATGTTTCTCTTTTCTTTATCAAACCTA  450

seq1  ATCAGTTATATGTTTATCTATAAATCCATTTTTATTGTTTAGAATACAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTATATGTTTATCTATAAATCCATTTTTATTGTTTAGAATACAAT  500

seq1  TTATGTATGGACTTTACAGTGTATTCACTTAGGTAATGGTGATCATTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATGGACTTTACAGTGTATTCACTTAGGTAATGGTGATCATTAGG  550

seq1  GTCTTTTAGTCTATTACAAATGAAGATGCTATCTATTCCGTAGTGTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTAGTCTATTACAAATGAAGATGCTATCTATTCCGTAGTGTTATG  600

seq1  GTGATATATATATATATATATATATACATATATATATATAATTTAAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATATATATATATATATATATACATATATATATATAATTTAAACAA  650

seq1  ATATCTAGTTTAAATACTTGTATATTATGTTAAGTGATCTCTTAGTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAGTTTAAATACTTGTATATTATGTTAAGTGATCTCTTAGTCATT  700

seq1  CATCTAACTTTCAACCTACTTCCAAATATGGTAAATTTTAAACTTTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAACTTTCAACCTACTTCCAAATATGGTAAATTTTAAACTTTTAAC  750

seq1  ACTTATGGATAAAAGATACAGTTGGTTTGCATTTAAAGGCAAAACTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGGATAAAAGATACAGTTGGTTTGCATTTAAAGGCAAAACTTCAT  800

seq1  TTCATGA-TTTTAATTTTATTAGTTTTAATGTATGCCTAGTCTATGCTTT  849
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATTTTTAATTTTATTAGTTTTAATGTATGCCTAGTCTATGCTTT  850

seq1  TAAATTTGCTTCTCCAGTGATAAAATATGGAAAATGTATTTTTATGTACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGCTTCTCCAGTGATAAAATATGGAAAATGTATTTTTATGTACT  900

seq1  TTGTGCTCATATTTTATCCTACAGTTTTATTTCTATAAAT-AACACAAAC  948
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGTGCTCATATTTTATCCTACAGTTTTATTTCTATAAATAAACACAAAC  950

seq1  TAGCAATAAAATCAGGAAGGATTTGCTCATAGAACCCCACTTATATC-TG  997
      ||||||| |||||||||||||||  |||||||||||||||||||||| ||
seq2  TAGCAATTAAATCAGGAAGGATTGCCTCATAGAACCCCACTTATATCTTG  1000

seq1  TATGATTTGC-TATGAGTAAATTCAATTAAGATTT-ATTCTCCTATATTA  1045
      |||||||||| ||||||||||||||| ||  |||| ||||||||||||||
seq2  TATGATTTGCTTATGAGTAAATTCAAATAGAATTTAATTCTCCTATATTA  1050

seq1  TATATAAACATAGTACCCATAACAATAATGA--CTCTATTA  1084
      || || ||||||||| |||| || |||||||   |||||||
seq2  TA-AT-AACATAGTA-CCATTAC-ATAATGAACTTCTATTA  1087