BAC Information

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BAC

Clone NameB6Ng01-183I10
Chromosome9 (Build37)
Map Location 81,334,663 - 81,335,837
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666534
Downstream geneLOC100039038, Htr1b, LOC671392, 4930486G11Rik, LOC100039085
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183I10.bB6Ng01-183I10.g
ACCGA009126GA009127
length1,1701,158
definitionB6Ng01-183I10.b B6Ng01-183I10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctaactgaatcctaatgccttcctgcccactaagggttctt
agttttgcatttcctttatttgcatttcctgtcactttcacattctaagt
ctttctatccagtgatttgaacacacacctacttcaaaacaaacaaagaa
acaaacaaggtctgggaattactaatcctaaaatttattctacagcacta
tgagaagttcttgctgtttttggaggagcatgatctggagacagaggctc
ctctccagagccttatcagtaactgagacagagttagaacccatcagtct
tccagcccacagagactgagaccaatgcccacaagatgccttggtgctga
gccacactaacttctaggctggtgatggatatcaaatggaagtctactgt
agatttttccctccagactcctggtctgtgcatagaccttagcaggtctt
atagctttcactaacttctcaacagaccaacattctggaacaaactgttt
tatctctcctacatgtaaatagacaattaaaaaaatatataaaacagctc
aatttttaaaattcatacattttctgatatgtaattttaccataatgaaa
ggatggaaatgtgagaataatgaaagattttaaaagaattactaagtact
atttacttctactattaatagagttggtattcaaatatgaaattggataa
agaagatactaataaggacctgaagaaagttttattctcatcacaaatta
acacttactgagggcctcctccctgcctgccaactgatgtttcctaacta
aaaggacatgggtaagggtaaggaatacattgtttctgagctttgcattt
cagctatgtggaaattgctgtctaatctcaaaatcaaataacaagaaaca
caaagtcattctgtgaccatgttatactacttgagtttcctatcattagt
cagtaaacacccagctaattagatttgcagcattgagtccccatgagtta
tgcactagtacctgtaaactaaagattgcaattcatggacacattttaaa
agtagatctgtatcagtggtgtgtcctctaacatatgattgcatctttct
ttgatatcctctgtgcatctcagatgacgaaaccttgtctaactatagtc
catattgcttatagcaatga

gaattcttgctcttctattataagctggagcccctaccccctatatcttt
cttagctcataacacctgtattcttcgatttctctctcacttcccttccc
acccacccatggtctctttatatagtttcctggcttatttggatagtcca
tgttggacaattacacatgagggtttggagtcacagatgagagagaacat
gaaacatgtgtctctctgggtctgagttatattattaaatataaccttgt
ctagttacacatatttactttttaaagttccataaccattccgtagtgaa
tatggattattcataccatattttcattatccattcatttgttgaaggac
atttagatagtttacatttcagctatttttgaataatgaaacagtaaaca
ctgctgagtaagtatctcagagatactctgtggaatattttggacatgtt
ccaaggaatgatatagctgcatcatgtggtagatttatttttaattttct
gagtattcttcatacagatatccagaggagctaaaccaattagcagttct
accaaaagcaagtgaggatttcccttttcacagaaccacatgggcatttg
ttgccatttgttttattggtcttatgatgaaatctcaagggttttaaatt
cccgtttccttaattttgaacatttttgaagtaatttttagccattatta
ttttttctattgagaactctaacaacttttctttcctttttcttttcttt
tttttttttttttttttttttttggtaaaattcttcagatgttaaaaaca
ttttttttcccattcaatgtgtaacttttttcactgaattggttgtttcc
ttgacagtacagaagctttttagttttatgaagtcatagttggcatcaat
ttctgagccaatgtagttttagaaatttccattcctacacattttttttt
tttttaatttatgtttgtccctgcgtgctatgtctcgccagccaagaaca
caccacagaacatccgatctctgcagcaatgccttaattcgctagcttca
gcatgagacagactcgagcctcatagcctgcttataaccctcagtgcgca
tgtccaacctgatgctctgcccagagtccatgaatgccagaatgccgtgt
acttggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_81334663_81335837
seq2: B6Ng01-183I10.b_43_1212

seq1  GAATTCTTTCTAACTGAATCCTAATGCCTTCCTGCCCACTAAGGGTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAACTGAATCCTAATGCCTTCCTGCCCACTAAGGGTTCTT  50

seq1  AGTTTTGCATTTCCTTTATTTGCATTTCCTGTCACTTTCACATTCTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGCATTTCCTTTATTTGCATTTCCTGTCACTTTCACATTCTAAGT  100

seq1  CTTTCTATCCAGTGATTTGAACACACACCTACTTCAAAACAAACAAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATCCAGTGATTTGAACACACACCTACTTCAAAACAAACAAAGAA  150

seq1  ACAAACAAGGTCTGGGAATTACTAATCCTAAAATTTATTCTACAGCACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGGTCTGGGAATTACTAATCCTAAAATTTATTCTACAGCACTA  200

seq1  TGAGAAGTTCTTGCTGTTTTTGGAGGAGCATGATCTGGAGACAGAGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTTCTTGCTGTTTTTGGAGGAGCATGATCTGGAGACAGAGGCTC  250

seq1  CTCTCCAGAGCCTTATCAGTAACTGAGACAGAGTTAGAACCCATCAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGAGCCTTATCAGTAACTGAGACAGAGTTAGAACCCATCAGTCT  300

seq1  TCCAGCCCACAGAGACTGAGACCAATGCCCACAAGATGCCTTGGTGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCACAGAGACTGAGACCAATGCCCACAAGATGCCTTGGTGCTGA  350

seq1  GCCACACTAACTTCTAGGCTGGTGATGGATATCAAATGGAAGTCTACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTAACTTCTAGGCTGGTGATGGATATCAAATGGAAGTCTACTGT  400

seq1  AGATTTTTCCCTCCAGACTCCTGGTCTGTGCATAGACCTTAGCAGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTCCCTCCAGACTCCTGGTCTGTGCATAGACCTTAGCAGGTCTT  450

seq1  ATAGCTTTCACTAACTTCTCAACAGACCAACATTCTGGAACAAACTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTTCACTAACTTCTCAACAGACCAACATTCTGGAACAAACTGTTT  500

seq1  TATCTCTCCTACATGTAAATAGACAATTAAAAAAATATATAAAACAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCCTACATGTAAATAGACAATTAAAAAAATATATAAAACAGCTC  550

seq1  AATTTTTAAAATTCATACATTTTCTGATATGTAATTTTACCATAATGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAAATTCATACATTTTCTGATATGTAATTTTACCATAATGAAA  600

seq1  GGATGGAAATGTGAGAATAATGAAAGATTTTAAAAGAATTACTAAGTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAAATGTGAGAATAATGAAAGATTTTAAAAGAATTACTAAGTACT  650

seq1  ATTTACTTCTACTATTAATAGAGTTGGTATTCAAATATGAAATTGGATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTCTACTATTAATAGAGTTGGTATTCAAATATGAAATTGGATAA  700

seq1  AGAAGATACTAATAAGGACCTGAAAGAAAGTTTTATTCTCATCACAAATT  750
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGAAGATACTAATAAGGACCTG-AAGAAAGTTTTATTCTCATCACAAATT  749

seq1  AACACTTACTGAGGGCCTCCTCCCTGCCTGCCAACTGATGTTTCCTAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTACTGAGGGCCTCCTCCCTGCCTGCCAACTGATGTTTCCTAACT  799

seq1  AAAAGGACATGGGTAAGGGTAAGGAATACATTGTTTCTGAGCTTTGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACATGGGTAAGGGTAAGGAATACATTGTTTCTGAGCTTTGCATT  849

seq1  TCAGCTATGTGGAAATTGCTGTCTAATCTCAAAATCAAATAACAAGAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATGTGGAAATTGCTGTCTAATCTCAAAATCAAATAACAAGAAAC  899

seq1  ACAAAGTCATTCTGTGACCATGTTATACTACTTGAGTTTCCTATCATTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTCATTCTGTGACCATGTTATACTACTTGAGTTTCCTATCATTAG  949

seq1  TCAGTAAACACCCAGCTAATTAGATTTGCAGCATTGAGTCCCCATGAGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAACACCCAGCTAATTAGATTTGCAGCATTGAGTCCCCATGAGTT  999

seq1  ATGCACTAGTACCTGTAAAACTAAAGAATTGCAATTCATGGACACATTTT  1050
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  ATGCACTAGTACCTGT-AAACTAAAG-ATTGCAATTCATGGACACATTTT  1047

seq1  AAAAGTTAGATCTGTAATCAGT-GTGTGTTCTCTACATTATGGTTTGCAT  1099
      ||||| ||||||||| |||||| |||||| |||||   ||| | ||||||
seq2  AAAAG-TAGATCTGT-ATCAGTGGTGTGTCCTCTAACATAT-GATTGCAT  1094

seq1  CTTTCTTTGATTATCTCTGTTGCAATCTCAGTATGACGAA--CCTGTCTA  1147
      |||||||||||   ||||| ||| ||||||| ||||||||  | ||||||
seq2  CTTTCTTTGATATCCTCTG-TGC-ATCTCAG-ATGACGAAACCTTGTCTA  1141

seq1  CCTTATAGT-CATATTTGTTATAG-AATGA  1175
       | |||||| ||||||  |||||| |||||
seq2  AC-TATAGTCCATATTGCTTATAGCAATGA  1170


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