BAC Information

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BAC

Clone NameB6Ng01-183P17
Chromosome9 (Build37)2 (Build37)
Map Location 116,059,691 - 116,059,943116,800,707 - 116,801,652
singlet/doubletsingletsinglet
Overlap geneTgfbr2
Upstream geneOsbpl10, LOC100043812, Stt3b, LOC100039567, LOC670467, EG546164, Gadl1, EG668829
Downstream geneLOC100043817, LOC100043819, D730003K21Rik, Rbms3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183P17.bB6Ng01-183P17.g
ACCGA009471GA009472
length247951
definitionB6Ng01-183P17.b B6Ng01-183P17.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(116,059,691 - 116,059,943)(116,800,707 - 116,801,652)
sequence
gaattctggggaagagagaagattgctacttcagccttgggtgtcatgta
ttctgaaagtttggccctgggtgttggggtgctggggttggggaggtagt
ggtttatcgagtttgctgctctggctttggtgtccttggtgaagcaaaac
cagaaaacaaccaacaactaatgatagggattagctcccctgttaaacct
aagccctgagtgtagcaccaggaggtcctggtattgagagatatggg

gaattccatccttcttcacggaatcagttcctgagccttaagattttccc
cggtaacaaatgagaaccgctgtacccagagcggctttgtgagttgccca
gtcacccacttttctccaggggggaaggaagaaactcaagagtctcaaaa
tagcccggtcctagtccttcaacaagtgcaggttacatcactttacaggg
ctggttgtgacatcacttctagacctgaacgcggcccaccccaccactga
gaaaatggaaaatgctgagccgcagcctcaggactttttcatctagaggc
aatttctgtctgcctaaacctgactgcagggcaggtgggtgcagagccca
gcaaagaagcctttgaaagcaggaacccaggctctgcaggtcagcttgga
gcaagtccaaactgggttctagcccgcacacacccccgccccctggtgac
aagcaatctgtttatggggacacttttgtgaggttacagaatctctgcaa
gagagggagcgggttctggcctggtttctaggtaacccgccacaccaagg
tgcacaaacacgatcggacagagaagaggggtaaaaagagaagctggacg
gccagggccccctcccgggccgccgtgaaacgcgctttaattgcttcaaa
gagcccttctcaatggggtttcagaggcgcgggagcgggtccccagcgag
ggctcctttccggctggccagcattcctgggcgctgcgaggggagagccc
gcggctcatttccatgcctgtcgcatactgccctccgttgtgccgggccg
ggccgcgaggggagcgcggctgggcagcgaacaaagccccattcatcccc
ggggacggctttcctcccggaccagccgcggccgcagatgggctggctcg
ggcacgccaatccatcctcagggccggggagcgcggccccgcccgcgcac
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_116059691_116059943
seq2: B6Ng01-183P17.b_41_287

seq1  GAATTCTGGGGAAGAGAGAAGATTGCTACTTCAGCCTTGGGTGTCATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGAAGAGAGAAGATTGCTACTTCAGCCTTGGGTGTCATGTA  50

seq1  TTCTGAAAGTTTGGCCCTGGGTGTTGGGGTGCTGGGGTTGGGGAGGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGTTTGGCCCTGGGTGTTGGGGTGCTGGGGTTGGGGAGGTAGT  100

seq1  GGCTTTTATTAGGTAGTTTGCTGCTCTGGCTTTGGTGTCCTTGGTGAAGC  150
      ||  |||||     ||||||||||||||||||||||||||||||||||||
seq2  GG--TTTAT---CGAGTTTGCTGCTCTGGCTTTGGTGTCCTTGGTGAAGC  145

seq1  AAAAGCAGAAAACAACCAACAACTAATGATAGGGATTAGCTCCCCTGTTA  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGAAAACAACCAACAACTAATGATAGGGATTAGCTCCCCTGTTA  195

seq1  AACCTAAGCCCTGAGTGGCAGCACCAGGAGGTCCTGGTAGTGAGAGAAAT  250
      |||||||||||||||| | |||||||||||||||||||| ||||||| ||
seq2  AACCTAAGCCCTGAGT-GTAGCACCAGGAGGTCCTGGTATTGAGAGATAT  244

seq1  GGG  253
      |||
seq2  GGG  247


seq1: chr2_116800707_116801652
seq2: B6Ng01-183P17.g_67_1017

seq1  GAATTCCATCCTTCTTCACGGAATCAGTTCCTGAGCCTTAAGATTTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCTTCTTCACGGAATCAGTTCCTGAGCCTTAAGATTTTCCC  50

seq1  CGGTAACAAATGAGAACCGCTGTACCCAGAGCGGCTTTGTGAGTTGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAACAAATGAGAACCGCTGTACCCAGAGCGGCTTTGTGAGTTGCCCA  100

seq1  GTCACCCACTTTTCTCCAGGGGGGAAGGAAGAAACTCAAGAGTCTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCACTTTTCTCCAGGGGGGAAGGAAGAAACTCAAGAGTCTCAAAA  150

seq1  TAGCCCGGTCCTAGTCCTTCAACAAGTGCAGGTTACATCACTTTACAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCGGTCCTAGTCCTTCAACAAGTGCAGGTTACATCACTTTACAGGG  200

seq1  CTGGTTGTGACATCACTTCTAGACCTGAACGCGGCCCACCCCACCACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGTGACATCACTTCTAGACCTGAACGCGGCCCACCCCACCACTGA  250

seq1  GAAAATGGAAAATGCTGAGCCGCAGCCTCAGGACTTTTTCATCTAGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGGAAAATGCTGAGCCGCAGCCTCAGGACTTTTTCATCTAGAGGC  300

seq1  AATTTCTGTCTGCCTAAACCTGACTGCAGGGCAGGTGGGTGCAGAGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTGTCTGCCTAAACCTGACTGCAGGGCAGGTGGGTGCAGAGCCCA  350

seq1  GCAAAGAAGCCTTTGAAAGCAGGAACCCAGGCTCTGCAGGTCAGCTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAGCCTTTGAAAGCAGGAACCCAGGCTCTGCAGGTCAGCTTGGA  400

seq1  GCAAGTCCAAACTGGGTTCTAGCCCGCACACACCCCCGCCCCCTGGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCCAAACTGGGTTCTAGCCCGCACACACCCCCGCCCCCTGGTGAC  450

seq1  AAGCAATCTGTTTATGGGGACACTTTTGTGAGGTTACAGAATCTCTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATCTGTTTATGGGGACACTTTTGTGAGGTTACAGAATCTCTGCAA  500

seq1  GAGAGGGAGCGGGTTCTGGCCTGGTTTCTAGGTAACCCGCCACACCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGCGGGTTCTGGCCTGGTTTCTAGGTAACCCGCCACACCAAGG  550

seq1  TGCACAAACACGATCGGACAGAGAAGAGGGGTAAAAAGAGAAGCTGGACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAACACGATCGGACAGAGAAGAGGGGTAAAAAGAGAAGCTGGACG  600

seq1  GCCAGGGCCCCCTCCCGGGCCGCCGTGAAACGCGCTTTAATTGCTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCCCCCTCCCGGGCCGCCGTGAAACGCGCTTTAATTGCTTCAAA  650

seq1  GAGCCCTTCTCAATGGGGTTTCAGAGGCGCGGGAGCGGGTCCCCAGCGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTTCTCAATGGGGTTTCAGAGGCGCGGGAGCGGGTCCCCAGCGAG  700

seq1  GGCTCCTTTCCGGCTGGCCAGCATTCCTGGGCGCTGCGAGGGGAGAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTTCCGGCTGGCCAGCATTCCTGGGCGCTGCGAGGGGAGAGCCC  750

seq1  GCGGCTCATTTCCATGCCTGTCGCATACTG-CCTCCGTTGTGCCGGGCCG  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCGGCTCATTTCCATGCCTGTCGCATACTGCCCTCCGTTGTGCCGGGCCG  800

seq1  GGCCGCGAGGGGAGCGCGGCT-GGCAGCGAACAAAGCCCCATTCATCCCC  848
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGCCGCGAGGGGAGCGCGGCTGGGCAGCGAACAAAGCCCCATTCATCCCC  850

seq1  GGGGACGGC-TTCCTCCCGGACCAGCCGCGGCCGCAGATGGGCTGGCTCG  897
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACGGCTTTCCTCCCGGACCAGCCGCGGCCGCAGATGGGCTGGCTCG  900

seq1  GGCACGCC-ATCCAT-CTCCAGGCCGGGGAGCGCGGCCCCGCCCGCGCAC  945
      |||||||| |||||| |||  |||||||||||||||||||||||||||||
seq2  GGCACGCCAATCCATCCTCAGGGCCGGGGAGCGCGGCCCCGCCCGCGCAC  950

seq1  A  946
      |
seq2  A  951


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