BAC Information

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BAC

Clone NameB6Ng01-184B17
Chromosome9 (Build37)
Map Location 44,863,065 - 45,037,175
singlet/doubletdoublet
Overlap geneA530065I17Rik, Amica1, Scn2b, Scn4b, Tmprss4
Upstream geneUsp2, Mfrp, Rnf26, LOC100042569, Mcam, Cbl, BC038167, Pdzd3, Nlrx1, Abcg4, Mizf, Tmem24, Dpagt1, H2afx, Hmbs, Vps11, LOC100043172, Hyou1, LOC100043178, Slc37a4, Trappc4, Rps25, Ccdc84, Foxr1, Upk2, Bcl9l, Blr1, Ddx6, LOC667406, LOC100042660, Treh, Phldb1, Arcn1, 1500035H01Rik, Tmem25, BC021608, Mll1, Atp5l, Ube4a, Cd3g, Cd3d, Cd3e, Eva1
Downstream geneIl10ra, Tmprss13, Fxyd6, Fxyd2, Dscaml1, Cep164, LOC640094, Bace1, Rnf214, Pcsk7, Tagln, Sidt2, Pafah1b2, 2610005M20Rik, BC033915, Apoa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184B17.bB6Ng01-184B17.g
ACCGA009565GA009566
length486920
definitionB6Ng01-184B17.b B6Ng01-184B17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,863,065 - 44,863,556)(45,036,641 - 45,037,175)
sequence
cataaaaatagaactgttttttcagtctgtagccaatctgaagcagaaga
gcgcaatcagatcctcctgagagtcaaagaaccgctgatgagggtaaccg
ggtacgattctagtaacaatccttgtccctgattgaggttgggtccggga
cggctctttcaaaggtgactcccgacatgacgtcacttccggcaccacct
gcatggtccccgggaggcgtaaagagggtgtgtaagtatcggaagagctg
tcgggatgcagctggcaagaggaacagtaggaggccgtggctgcgctctc
tttccactgctgagcatcctagtcgtccagggtgagtgcgccagctggct
ggactccacttccggcagggggcgggggggtcaggaaagatggtcgcttt
tccggttccgggttggggggtctcagaaaagcccccgctcggcttctgcg
aaggaaggaaggaaggaagggaaggagggggtgtgg
gaattccagggcacttgcaacatcttgattgtatttgagagaccaaatct
tttaagttcagactccattgtagagaacctgacctaagtttgaattcggg
taaagtaaccggttggtacctagcattagtttctaggtttctgcccaaca
agcccaccttctgtctgacatgcaccaatgcagaaggaaacagaagttaa
gtttatggtttgactcccagcaccagccaattatgctaaaggacacagta
gctctccaattagatgcttgccaggctacaaacactcacctccctcttgc
tgctttctataaaacattaccctggtagatgtctggggctcctctccacc
aaaaccgaactatgtgtcagctgggggctgagaggcccaagctagctcga
ataaaggccttggtgtgattgcatcagatcggctcctgtctggtcttttg
gggttcactagcacttccctggcactacagattgagaggtgcctagggga
ccagtaaagctcacttctttctataagggcattcccagagatgattggca
tgtcagagaacaaataagagggtaaaacctgccctgaatgtgggtggcac
catcacttagactgtaatcttcaaatatagtagctttgaacccttcttaa
caatattaaggcattacttgaagaaagggcccaacactgtcttgttttgt
gtcacagtggagaagctatggttggttaagtgactatgtctacctatcct
gattcttgcaccaggaccaactttcacccttgtgctggtcctgcatagtg
tttggtggcatctgtgtgaggccaagatgtcacccaggtgcagacatatg
tcatatatccacatgccacttggataactgctatttcagaagacccttag
accttagactgtcctaccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_44863065_44863556
seq2: B6Ng01-184B17.b_42_533

seq1  GAATTCCATAAAAATAGAACTGTTTTTTCAGTCTGTAGCCAATCTGAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAAATAGAACTGTTTTTTCAGTCTGTAGCCAATCTGAAGC  50

seq1  AGAAGAGCGCAATCAGATCCTCCTGAGAGTCAAAGAACCGCTGATGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGCGCAATCAGATCCTCCTGAGAGTCAAAGAACCGCTGATGAGGG  100

seq1  TAACCGGGTACGATTCTAGTAACAATCCTTGTCCCTGATTGAGGTTGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCGGGTACGATTCTAGTAACAATCCTTGTCCCTGATTGAGGTTGGGT  150

seq1  CCGGGACGGCTCTTTCAAAGGTGACTCCCGACATGACGTCACTTCCGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGACGGCTCTTTCAAAGGTGACTCCCGACATGACGTCACTTCCGGCA  200

seq1  CCACCTGCATGGTCCCCGGGAGGCGTAAAGAGGGTGTGTAAGTATCGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGCATGGTCCCCGGGAGGCGTAAAGAGGGTGTGTAAGTATCGGAA  250

seq1  GAGCTGTCGGGATGCAGCTGGCAAGAGGAACAGTAGGAGGCCGTGGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTCGGGATGCAGCTGGCAAGAGGAACAGTAGGAGGCCGTGGCTGC  300

seq1  GCTCTCTTTCCACTGCTGAGCATCCTAGTCGTCCAGGGTGAGTGCGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTTCCACTGCTGAGCATCCTAGTCGTCCAGGGTGAGTGCGCCAG  350

seq1  CTGGCTGGACTCCACTTCCGGCAGGGGGCGGGGGGGTCAGGAAAGATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGACTCCACTTCCGGCAGGGGGCGGGGGGGTCAGGAAAGATGGT  400

seq1  CGCTTTTCCGGTTCCGGGTTGGGGGGTCTCAGAAAAGCCCCCGCTCGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTCCGGTTCCGGGTTGGGGGGTCTCAGAAAAGCCCCCGCTCGGCT  450

seq1  TCTGCGAAGGAAGGAAGGAAGGAAGGGAAGGAGGGGGTGTGG  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCGAAGGAAGGAAGGAAGGAAGGGAAGGAGGGGGTGTGG  492

seq1: chr9_45036641_45037175
seq2: B6Ng01-184B17.g_68_602 (reverse)

seq1  GGAATGCCCTTATAGAAAGAAGTGAGCTTTACTGGTCCCCTAGGCACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCCCTTATAGAAAGAAGTGAGCTTTACTGGTCCCCTAGGCACCTC  50

seq1  TCAATCTGTAGTGCCAGGGAAGTGCTAGTGAACCCCAAAAGACCAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTGTAGTGCCAGGGAAGTGCTAGTGAACCCCAAAAGACCAGACAG  100

seq1  GAGCCGATCTGATGCAATCACACCAAGGCCTTTATTCGAGCTAGCTTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGATCTGATGCAATCACACCAAGGCCTTTATTCGAGCTAGCTTGGG  150

seq1  CCTCTCAGCCCCCAGCTGACACATAGTTCGGTTTTGGTGGAGAGGAGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGCCCCCAGCTGACACATAGTTCGGTTTTGGTGGAGAGGAGCCC  200

seq1  CAGACATCTACCAGGGTAATGTTTTATAGAAAGCAGCAAGAGGGAGGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCTACCAGGGTAATGTTTTATAGAAAGCAGCAAGAGGGAGGTGA  250

seq1  GTGTTTGTAGCCTGGCAAGCATCTAATTGGAGAGCTACTGTGTCCTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTAGCCTGGCAAGCATCTAATTGGAGAGCTACTGTGTCCTTTAG  300

seq1  CATAATTGGCTGGTGCTGGGAGTCAAACCATAAACTTAACTTCTGTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTGGCTGGTGCTGGGAGTCAAACCATAAACTTAACTTCTGTTTCC  350

seq1  TTCTGCATTGGTGCATGTCAGACAGAAGGTGGGCTTGTTGGGCAGAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTGGTGCATGTCAGACAGAAGGTGGGCTTGTTGGGCAGAAACC  400

seq1  TAGAAACTAATGCTAGGTACCAACCGGTTACTTTACCCGAATTCAAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACTAATGCTAGGTACCAACCGGTTACTTTACCCGAATTCAAACTT  450

seq1  AGGTCAGGTTCTCTACAATGGAGTCTGAACTTAAAAGATTTGGTCTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGGTTCTCTACAATGGAGTCTGAACTTAAAAGATTTGGTCTCTCA  500

seq1  AATACAATCAAGATGTTGCAAGTGCCCTGGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  AATACAATCAAGATGTTGCAAGTGCCCTGGAATTC  535