BAC Information

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BAC

Clone NameB6Ng01-186H11
Chromosome9 (Build37)8 (Build37)
Map Location 13,120,673 - 13,121,034106,206,498 - 106,207,029
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC622505, LOC100039680, LOC665285, LOC100039729
Downstream geneLOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329, Sesn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186H11.bB6Ng01-186H11.g
ACCGA011303GA011304
length919532
definitionB6Ng01-186H11.b B6Ng01-186H11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(13,120,673 - 13,121,034)(106,206,498 - 106,207,029)
sequence
gaattcattcctgcatgtcttacagctgggatatcattttctcatatttt
tggacttggatttgaattgaaccagttggctttccagattgccagctgca
gatcttagtcttcttggtttccataatcatttcagacaattccttatggc
aaatttcttcctagtatatgtatgacaatatagcacataagaacatcttc
aaatatataacataatgaatgtcttctcatattcagacatttgtatgtgt
atgtgttgctgtgtatgatgttagttctgcttctctgtggaacactgatt
atcacagtactttaaaaacattggaaattttagagagagagagagagaga
gagagagagagagagagagagagagtgtgaaatttcaggctgctgtatat
ttttttcttatttatttatttatttatttatttatttatttttattagat
attttctttatatacatttcaaatgctatcctgaaagtttcctataccct
tctccagccctgctcccctacccacccactcttggccctggcattcccct
gtactggggcatataaagtttgcaataccaaggggactctcttcccagtg
atggctgactaggtcatcttctgctacatatgcagctagagatatgagct
ctgggggtactggttaattcatattgttgcagaccccttcagctccttgg
gtgctttctctagcttctccattggagaccctgtgttccatcttatagat
gactgtgagcatccacttctgcatttgtcaggcagtggcatagcttcata
taagacagctataacagggtcccttcagcaaaatctttctggcatatgca
atagtgtctgggtttggtggctgattatgggatggatccccatgtggggt
agtctctggatagtccctc

tgtgtttaaactataagctttggaagtggatataaaacagtggtcatcag
ccaggatttgttctttccctcaggggaaacctggtaaagtttgaaaatat
ttgagtttataacaactggaaataggtgggaactgctactagaatgtgga
ggttatagacaaagcatggtgataaatatcctgccgtgcaaagaaaaagc
ccacagcaaggaattattcactttaaaatatcactagctgaggcaaagca
tccagatcagacaggagcatatgtgtttttacaggtagatggatggatga
tggatgctatatgaatgggtaataatagatgatgtcatgatatcacaact
tatagatattatatatatacacacatatatatatgagagacagagacaga
aagacagagacacacagagagaacatattctgttcatatagcctatatat
atacacacacatatatattcatacatagtaatgatagatagatagataga
tagatagatagatagatagatagatagataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_13120673_13121034
seq2: B6Ng01-186H11.b_478_816 (reverse)

seq1  CAAATACAGAAGTGGATGCTCACAGTCATCTATAAGATGAATCACAGGGC  50
      ||||| ||||||||||||||||||||||||||||||||| | ||||||| 
seq2  CAAATGCAGAAGTGGATGCTCACAGTCATCTATAAGATGGAACACAGGGT  50

seq1  CTCCAATGGAGAATCTAGAGAAAGCACCCAAGAAGCTGAAAGGGTCTGCA  100
      ||||||||||||| |||||||||||||||||| ||||||| |||||||| 
seq2  CTCCAATGGAGAAGCTAGAGAAAGCACCCAAGGAGCTGAAGGGGTCTGC-  99

seq1  ACCCTATACGTGGAACAATATGAACTAACCAGTACCCCCAGACCTCGTGT  150
                   ||||||||||| ||||||||||||||||| ||| | |
seq2  -------------AACAATATGAATTAACCAGTACCCCCAGAGCTCATAT  136

seq1  CTCTAGCTGCATATGTAGCAGAAGATGGCCTACTCAGCCATCACTGGGAA  200
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  CTCTAGCTGCATATGTAGCAGAAGATGACCTAGTCAGCCATCACTGGGAA  186

seq1  GAGAGTCCCCTTGGTATTGCACACTTTATATGCTCCAGTATAGGGGAATG  250
      ||||||||||||||||||||| ||||||||||| |||||| |||||||||
seq2  GAGAGTCCCCTTGGTATTGCAAACTTTATATGCCCCAGTACAGGGGAATG  236

seq1  CCAGGGCCTAGAAGTGCAAGTGGGTGAGTAGGGGAGCAGGTCGGGGGGAT  300
      |||||||| ||       |||||||| ||||||||||||| | || |   
seq2  CCAGGGCCAAG-------AGTGGGTGGGTAGGGGAGCAGGGCTGGAG--A  277

seq1  AGGGTATAGGGAACTTTCAAGATAGCATTTGAAATGTAAATGAAGAAAAT  350
      |||||||||| |||||||| |||||||||||||||||| || ||||||||
seq2  AGGGTATAGGAAACTTTCAGGATAGCATTTGAAATGTATATAAAGAAAAT  327

seq1  ATCTAATAAAAA  362
      ||||||||||||
seq2  ATCTAATAAAAA  339


seq1: chr8_106206498_106207029
seq2: B6Ng01-186H11.g_75_606

seq1  TGTGTTTAAACTATAAGCTTTGGAAGTGGATATAAAACAGTGGTCATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTAAACTATAAGCTTTGGAAGTGGATATAAAACAGTGGTCATCAG  50

seq1  CCAGGATTTGTTCTTTCCCTCAGGGGAAACCTGGTAAAGTTTGAAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATTTGTTCTTTCCCTCAGGGGAAACCTGGTAAAGTTTGAAAATAT  100

seq1  TTGAGTTTATAACAACTGGAAATAGGTGGGAACTGCTACTAGAATGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTATAACAACTGGAAATAGGTGGGAACTGCTACTAGAATGTGGA  150

seq1  GGTTATAGACAAAGCATGGTGATAAATATCCTGCCGTGCAAAGAAAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAGACAAAGCATGGTGATAAATATCCTGCCGTGCAAAGAAAAAGC  200

seq1  CCACAGCAAGGAATTATTCACTTTAAAATATCACTAGCTGAGGCAAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCAAGGAATTATTCACTTTAAAATATCACTAGCTGAGGCAAAGCA  250

seq1  TCCAGATCAGACAGGAGCATATGTGTTTTTACAGGTAGATGGATGGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATCAGACAGGAGCATATGTGTTTTTACAGGTAGATGGATGGATGA  300

seq1  TGGATGCTATATGAATGGGTAATAATAGATGATGTCATGATATCACAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTATATGAATGGGTAATAATAGATGATGTCATGATATCACAACT  350

seq1  TATAGATATTATATATATACACACATATATATATGAGAGACAGAGACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATATTATATATATACACACATATATATATGAGAGACAGAGACAGA  400

seq1  AAGACAGAGACACACAGAGAGAACATATTCTGTTCATATAGCCTATATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAGACACACAGAGAGAACATATTCTGTTCATATAGCCTATATAT  450

seq1  ATACACACACATATATATTCATACATAGTAATGATAGATAGATAGATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACATATATATTCATACATAGTAATGATAGATAGATAGATAGA  500

seq1  TAGATAGATAGATAGATAGATAGATAGATAGA  532
      ||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATAGATAGATAGATAGATAGA  532


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