BAC Information

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BAC

Clone NameB6Ng01-186J08
Chromosome9 (Build37)
Map Location 85,268,165 - 85,269,122
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666669, LOC666672, BC023892
Downstream geneIbtk, 4933431K14Rik, EG434426, 9330154J02Rik, Tpbg, 2610018I03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186J08.bB6Ng01-186J08.g
ACCGA011383GA011384
length467957
definitionB6Ng01-186J08.b B6Ng01-186J08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttgccggcgagatactagctcgggcaagaccacactctgtctctgtatct
cctctcatggatattttgttcccccttctaagatggaccagagtatctat
actttggtcttccttcttcttgagcttcatttggtctgtgaatcttgagt
attctgactttctaggctgatatccactacagtgagtgtataccatgtgt
gttcttttgtgattagattacctcactcaggataatattttctagttcta
tccatttcatgaattcattgtttttaaaggctgagtagtattccattgtg
taagtgtaccacattttctgtatccattcctctgttgaggggcatctggg
ttttttctagtctctggctattataaataaagctgttatgaacatagtgg
ccccagtgtaggggaatgtcaggacagggaagcaggagtggatgggttgg
tgagcagggggagggga

gaattcatattcaaaccctgaaaatggctaaaacaggaaatgagctcttg
attgctaactgttggaacccctacgtaatgagcttgttgatgacaacatc
ctagaatattgctgtgctctaatttcattgagggtgcaatggttgtgcaa
tggttgtggtatagctaaatccccggggtacctttgcattccatcaaaag
tgaactcagtcttggagtacagggctttgagcacattgtctttactgctg
tttcctccccacaggtctgcttcctcatccaggatgatacattggattgt
gacacttgggtgggggtggggtcagtgaaattaactgtctttcccgtggg
aaataattcatcagggaatgggtgacgttgtaggaagcgatagcaacagt
ggagaagctagagatcacacaagtatcattcagtgttcactaagaaagca
accaccatgtcccttacatttttactacagataaagaaacacccagcttg
gctgctgtaaaaatccatggttctaattatagctgtgggggtaatgcttg
ttggtagcaattttacatatgttttctgtgggaagagtatctcaatactc
ttttaagagtggtggctggtgttggatgtatcttcctgccttttctaggg
ttgagaatttaggtccttagcactcacaggagtgcagattcccacccact
tagggtctgtatagaatttccacccagggaagtgaagacaggagaagttt
agtgagctagagtcattcaaaattcatctccaaatataaccctgatggct
tgcttgtaagttcagacattacgctagacttagcgaggggagcacaagag
aaaggcagtgatttttgtttattcatctcaataaacctgatccagcacta
agataagggttcatggaatgtagtctttataatatgacgattaaaaatgg
cctttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_85268165_85269122
seq2: B6Ng01-186J08.g_65_1021 (reverse)

seq1  CCAAA-GCCATTTCTTAATCGTCAATATTATAAAGACTACA-TCCATAAA  48
      ||||| ||||||| ||||||||| ||||||||||||||||| ||||| ||
seq2  CCAAAGGCCATTT-TTAATCGTC-ATATTATAAAGACTACATTCCATGAA  48

seq1  CCCTTATCTATGTGCTGGATCAGGTTTATCTAAGATGAATAAAACAAAAA  98
      |||||||||  |||||||||||||||||| | |||||||| |||||||||
seq2  CCCTTATCTTAGTGCTGGATCAGGTTTAT-TGAGATGAAT-AAACAAAAA  96

seq1  TCACTGCCTTTCTCTTTGTGCTCCCCTCGCTAAGTCTAGCGTAATGTCTG  148
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCACTGCCTTTCTC-TTGTGCTCCCCTCGCTAAGTCTAGCGTAATGTCTG  145

seq1  -ACTTACAAGC-AGCCATCAGGGTTATATTTGGAAGATGAA-TTTGAATG  195
       |||||||||| ||||||||||||||||||||| ||||||| ||||||||
seq2  AACTTACAAGCAAGCCATCAGGGTTATATTTGG-AGATGAATTTTGAATG  194

seq1  ACTCTAGCTCACTAAACTTCTCCTGTCTTCACTTCCCTGGGTGGAAATTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGCTCACTAAACTTCTCCTGTCTTCACTTCCCTGGGTGGAAATTC  244

seq1  TATACAGACCCTAAGTGGGTGGGAATCTGCACTCCTGTGAGTGCTAAGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGACCCTAAGTGGGTGGGAATCTGCACTCCTGTGAGTGCTAAGGA  294

seq1  CCTAAATTCTCAACCCTAGAAAAGGCAGGAAGATACATCCAACACCAGCC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATTCTCAACCCTAGAAAAGGCAGGAAGATACATCCAACACCAGCC  344

seq1  ACCACTCTTAAAAGAGTATTGAGATACTCTTCCCACAGAAAACATATGTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCTTAAAAGAGTATTGAGATACTCTTCCCACAGAAAACATATGTA  394

seq1  AAATTGCTACCAACAAGCATTACCCCCACAGCTATAATTAGAACCATGGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTACCAACAAGCATTACCCCCACAGCTATAATTAGAACCATGGA  444

seq1  TTTTTACAGCAGCCAAGCTGGGTGTTTCTTTATCTGTAGTAAAAATGTAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAGCAGCCAAGCTGGGTGTTTCTTTATCTGTAGTAAAAATGTAA  494

seq1  GGGACATGGTGGTTGCTTTCTTAGTGAACACTGAATGATACTTGTGTGAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATGGTGGTTGCTTTCTTAGTGAACACTGAATGATACTTGTGTGAT  544

seq1  CTCTAGCTTCTCCACTGTTGCTATCGCTTCCTACAACGTCACCCATTCCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCTTCTCCACTGTTGCTATCGCTTCCTACAACGTCACCCATTCCC  594

seq1  TGATGAATTATTTCCCACGGGAAAGACAGTTAATTTCACTGACCCCACCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAATTATTTCCCACGGGAAAGACAGTTAATTTCACTGACCCCACCC  644

seq1  CCACCCAAGTGTCACAATCCAATGTATCATCCTGGATGAGGAAGCAGACC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCAAGTGTCACAATCCAATGTATCATCCTGGATGAGGAAGCAGACC  694

seq1  TGTGGGGAGGAAACAGCAGTAAAGACAATGTGCTCAAAGCCCTGTACTCC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGAGGAAACAGCAGTAAAGACAATGTGCTCAAAGCCCTGTACTCC  744

seq1  AAGACTGAGTTCACTTTTGATGGAATGCAAAGGTACCCCGGGGATTTAGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAGTTCACTTTTGATGGAATGCAAAGGTACCCCGGGGATTTAGC  794

seq1  TATACCACAACCATTGCACAACCATTGCACCCTCAATGAAATTAGAGCAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCACAACCATTGCACAACCATTGCACCCTCAATGAAATTAGAGCAC  844

seq1  AGCAATATTCTAGGATGTTGTCATCAACAAGCTCATTACGTAGGGGTTCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATTCTAGGATGTTGTCATCAACAAGCTCATTACGTAGGGGTTCC  894

seq1  AACAGTTAGCAATCAAGAGCTCATTTCCTGTTTTAGCCATTTTCAGGGTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAGCAATCAAGAGCTCATTTCCTGTTTTAGCCATTTTCAGGGTT  944

seq1  TGAATATGAATTC  958
      |||||||||||||
seq2  TGAATATGAATTC  957


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