BAC Information

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BAC

Clone NameB6Ng01-186P23
Chromosome9 (Build37)
Map Location 15,634,012 - 15,798,681
singlet/doubletdoublet
Overlap geneMtnr1b, Fat3
Upstream geneMre11a, LOC100040259, Gpr83, Folr4, Panx1, Hephl1, 2200002K05Rik, Crsp6, 4931406C07Rik, Josd3, 5830418K08Rik, LOC100040375, LOC100039955, BC017612, Ccdc67, LOC665461, LOC330891, Slc36a4
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186P23.bB6Ng01-186P23.g
ACCGA011693GA011694
length9781,078
definitionB6Ng01-186P23.b B6Ng01-186P23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,797,711 - 15,798,681)(15,634,012 - 15,635,076)
sequence
gaattctagccagcggtggcagaaagtgatattacagggaggacccagag
cctcctgagacaagggttctcagtcactaccaccacctggggacaggtaa
gtgtctcttatggtaggtagggtgatcttttctatattgtaggttatttc
acagccatgcctggctcctcaaggctcctcaaccacttgattctagtagc
atttagacccaccacagtcctgtgacaaccaaaaatgtctacatacacta
gaaaaaaactctgaaaggcggagcatcattgccctggaggacaagtgtgc
cttctatatatgacttggggtggatttgtcctgaggtttcttcacactga
aaagttataaaggggaaccagggtaatactcagaattctaggaccatatg
cttgtttgtttgtttgtttgtttgtttgtttttagtgggttacaaagaga
gccagcgccatccttacagtgaaataacactttgcaatatatttttcctt
atgtttttgtttattgtgtttgaaaataattttgggcacagtcatttcat
ttgttctgcactgactatgtggcccagtctggctttgaacttatggactt
cctgtcccagtctcacactatcggcattacaggagtgtgataccatacca
agcatcgcattaacatggtaaacagtttatttgaggaaaggaaaatccat
gaattgtgcagctgcagactgttcagagcctcactgaagcagcaggaggg
acagaggcttccaggatgctcaccaaagtgtgtttcattggctaatgtgg
aataatacgcttcaggtccccccagcagaggttctttgttggatattttt
tttttgggttgtttgccttttagccatttacataaggtggagatttggac
ttccgcctaggggaacctcaaggcaatgggctgtctgtgtcatgggcttc
tgacaatggatgtgtcacctattgtcaa
gaattcttctgcacacgtttattggaagagcttgatagcgaaggagaaag
acactgagccacaaaactggtgctgcttatataggcctaggagtggcgtg
tctatacctgattggttgtgctttcagtgcctcatttacattccctggaa
tgggctgtgacttggtgcgaaacccttatgcacatgcgcacattggttgt
ttacccgaacttacaagcggtggccagcagtagccagtgccatcttgtaa
tggtgtatgtggcttctcacaggtttctgtcttattctgaggtcttagta
agttttttaatttgttgattacttctgggggaactgatcgccctgagttg
accagtgtactctgaggagcttcactgcctctgctgacccttttcctttg
tctttgtaaatgttcatttgttaggtgtgcaattaagtctgctactgttt
tatgtaaaatttggtagtcatttgatattaatagaaggtcatctacatat
gaaaaattgttacttattctggtgcgtggaatctatctaaagcccatctc
aatgcattgtgtgctataattggactatttttgtattcttgtggaactct
agtaaattggtattgtttttctttccatgagaatgtggtgatttctctag
agttgggacgtaggggaacgtgtctgttaggtctattgtggctaaccatt
tgggtgccacctgcctgatttgcaggaatcaatcatttacatttcccgaa
atgggctgtgacttggtgctaaacccttatgcacatgcgcacattggttg
tttacccgaatttacaggtggtggccagcggtagccagcgctaaccatct
ggcaattgtccagccatctgctctggtaggttatttaagctcctgtagtc
tactgtgaatctccaatttgccatttggttttctttactggcccaaatgg
agtttgttgtaagtttaaagcttttgtgttggttctatgataagcttctt
tttaattacattttgtatggtggtccctttacttcctccatacaccttct
acacacctaatgtggtggtggaagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_15797711_15798681
seq2: B6Ng01-186P23.b_48_1025 (reverse)

seq1  TTGACAATAGGTGACACAACCA-TGTCAG-AGGCCATGACACAGACAGCC  48
      |||||||||||||||||| ||| |||||| || |||||||||||||||||
seq2  TTGACAATAGGTGACACATCCATTGTCAGAAGCCCATGACACAGACAGCC  50

seq1  CATTGCCTTG-GGTTCCCCTAGGCGG-AGTCCAAATCTCCACCTTATGTA  96
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  CATTGCCTTGAGGTTCCCCTAGGCGGAAGTCCAAATCTCCACCTTATGTA  100

seq1  AAT-GCTAAAAGGCAAACAACC--AAAAAAAAATATCCAACAAAGAACCT  143
      ||| ||||||||||||||||||  ||||||||||||||||||||||||||
seq2  AATGGCTAAAAGGCAAACAACCCAAAAAAAAAATATCCAACAAAGAACCT  150

seq1  CTGCTGGGGGGACCTGAAGCGTATTATTCCACATTAGCCAATGAAACACA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGGGGACCTGAAGCGTATTATTCCACATTAGCCAATGAAACACA  200

seq1  CTTTGGTGAGCATCCTGGAAGCCTCTGTCCCTCCTGCTGCTTCAGTGAGG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGAGCATCCTGGAAGCCTCTGTCCCTCCTGCTGCTTCAGTGAGG  250

seq1  CTCTGAACAGTCTGCAGCTGCACAATTCATGGATTTTCCTTTCCTCAAAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACAGTCTGCAGCTGCACAATTCATGGATTTTCCTTTCCTCAAAT  300

seq1  AAACTGTTTACCATGTTAATGCGATGCTTGGTATGGTATCACACTCCTGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTTACCATGTTAATGCGATGCTTGGTATGGTATCACACTCCTGT  350

seq1  AATGCCGATAGTGTGAGACTGGGACAGGAAGTCCATAAGTTCAAAGCCAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCGATAGTGTGAGACTGGGACAGGAAGTCCATAAGTTCAAAGCCAG  400

seq1  ACTGGGCCACATAGTCAGTGCAGAACAAATGAAATGACTGTGCCCAAAAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCCACATAGTCAGTGCAGAACAAATGAAATGACTGTGCCCAAAAT  450

seq1  TATTTTCAAACACAATAAACAAAAACATAAGGAAAAATATATTGCAAAGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCAAACACAATAAACAAAAACATAAGGAAAAATATATTGCAAAGT  500

seq1  GTTATTTCACTGTAAGGATGGCGCTGGCTCTCTTTGTAACCCACTAAAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTCACTGTAAGGATGGCGCTGGCTCTCTTTGTAACCCACTAAAAA  550

seq1  CAAACAAACAAACAAACAAACAAACAAGCATATGGTCCTAGAATTCTGAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACAAACAAACAAGCATATGGTCCTAGAATTCTGAG  600

seq1  TATTACCCTGGTTCCCCTTTATAACTTTTCAGTGTGAAGAAACCTCAGGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCCTGGTTCCCCTTTATAACTTTTCAGTGTGAAGAAACCTCAGGA  650

seq1  CAAATCCACCCCAAGTCATATATAGAAGGCACACTTGTCCTCCAGGGCAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCACCCCAAGTCATATATAGAAGGCACACTTGTCCTCCAGGGCAA  700

seq1  TGATGCTCCGCCTTTCAGAGTTTTTTTCTAGTGTATGTAGACATTTTTGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTCCGCCTTTCAGAGTTTTTTTCTAGTGTATGTAGACATTTTTGG  750

seq1  TTGTCACAGGACTGTGGTGGGTCTAAATGCTACTAGAATCAAGTGGTTGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAGGACTGTGGTGGGTCTAAATGCTACTAGAATCAAGTGGTTGA  800

seq1  GGAGCCTTGAGGAGCCAGGCATGGCTGTGAAATAACCTACAATATAGAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTGAGGAGCCAGGCATGGCTGTGAAATAACCTACAATATAGAAA  850

seq1  AGATCACCCTACCTACCATAAGAGACACTTACCTGTCCCCAGGTGGTGGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACCCTACCTACCATAAGAGACACTTACCTGTCCCCAGGTGGTGGT  900

seq1  AGTGACTGAGAACCCTTGTCTCAGGAGGCTCTGGGTCCTCCCTGTAATAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGAGAACCCTTGTCTCAGGAGGCTCTGGGTCCTCCCTGTAATAT  950

seq1  CACTTTCTGCCACCGCTGGCTAGAATTC  971
      ||||||||||||||||||||||||||||
seq2  CACTTTCTGCCACCGCTGGCTAGAATTC  978

seq1: chr9_15634012_15635076
seq2: B6Ng01-186P23.g_67_1144

seq1  GAATTCTTCTGCACACGTTTATTGGAAGAGCTTGATAGCGAAGGAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCACACGTTTATTGGAAGAGCTTGATAGCGAAGGAGAAAG  50

seq1  ACACTGAGCCACAAAACTGGTGCTGCTTATATAGGCCTAGGAGTGGCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGAGCCACAAAACTGGTGCTGCTTATATAGGCCTAGGAGTGGCGTG  100

seq1  TCTATACCTGATTGGTTGTGCTTTCAGTGCCTCATTTACATTCCCTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACCTGATTGGTTGTGCTTTCAGTGCCTCATTTACATTCCCTGGAA  150

seq1  TGGGCTGTGACTTGGTGCGAAACCCTTATGCACATGCGCACATTGGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTGACTTGGTGCGAAACCCTTATGCACATGCGCACATTGGTTGT  200

seq1  TTACCCGAACTTACAAGCGGTGGCCAGCAGTAGCCAGTGCCATCTTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCGAACTTACAAGCGGTGGCCAGCAGTAGCCAGTGCCATCTTGTAA  250

seq1  TGGTGTATGTGGCTTCTCACAGGTTTCTGTCTTATTCTGAGGTCTTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATGTGGCTTCTCACAGGTTTCTGTCTTATTCTGAGGTCTTAGTA  300

seq1  AGTTTTTTAATTTGTTGATTACTTCTGGGGGAACTGATCGCCCTGAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTAATTTGTTGATTACTTCTGGGGGAACTGATCGCCCTGAGTTG  350

seq1  ACCAGTGTACTCTGAGGAGCTTCACTGCCTCTGCTGACCCTTTTCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGTACTCTGAGGAGCTTCACTGCCTCTGCTGACCCTTTTCCTTTG  400

seq1  TCTTTGTAAATGTTCATTTGTTAGGTGTGCAATTAAGTCTGCTACTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTAAATGTTCATTTGTTAGGTGTGCAATTAAGTCTGCTACTGTTT  450

seq1  TATGTAAAATTTGGTAGTCATTTGATATTAATAGAAGGTCATCTACATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAAATTTGGTAGTCATTTGATATTAATAGAAGGTCATCTACATAT  500

seq1  GAAAAATTGTTACTTATTCTGGTGCGTGGAATCTATCTAAAGCCCATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTGTTACTTATTCTGGTGCGTGGAATCTATCTAAAGCCCATCTC  550

seq1  AATGCATTGTGTGCTATAATTGGACTATTTTTGTATTCTTGTGGAACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTGTGTGCTATAATTGGACTATTTTTGTATTCTTGTGGAACTCT  600

seq1  AGTAAATTGGTATTGTTTTTCTTTCCATGAGAATGTGGTGATTTCTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTGGTATTGTTTTTCTTTCCATGAGAATGTGGTGATTTCTCTAG  650

seq1  AGTTGGGACGTAGGGGAACGTGTCTGTTAGGTCTATTGTGGCTAACCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGACGTAGGGGAACGTGTCTGTTAGGTCTATTGTGGCTAACCATT  700

seq1  TGGGTGCCACCTGCCTGATTTGCAGGAATCAATCATTTACATTTCCCGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCCACCTGCCTGATTTGCAGGAATCAATCATTTACATTTCCCGAA  750

seq1  ATGGGCTGTGACTTGGTGCTAAACCCTTATGCACATGCGCACATTGGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGTGACTTGGTGCTAAACCCTTATGCACATGCGCACATTGGTTG  800

seq1  TTTACCCGAATTTACAGGTGGTGGCCAGCGGTAGCCAGCGCTAACCATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCGAATTTACAGGTGGTGGCCAGCGGTAGCCAGCGCTAACCATCT  850

seq1  GGCAATTGTCCAGCCATCTGCTCTGGTAGGTTATTTAAGCTCCTGTAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTGTCCAGCCATCTGCTCTGGTAGGTTATTTAAGCTCCTGTAGTC  900

seq1  TACTGTGAATCTCC-ATTTGCCATTTGG-TTTCTTTACTGG-CCAAATGG  947
      |||||||||||||| ||||||||||||| |||||||||||| ||||||||
seq2  TACTGTGAATCTCCAATTTGCCATTTGGTTTTCTTTACTGGCCCAAATGG  950

seq1  AG-TTGTTGTA--GTTAAAGC-TTTGTGTTGGTTCTATAAT-AGCTTC-T  991
      || ||||||||   ||||||| |||||||||||||||| || |||||| |
seq2  AGTTTGTTGTAAGTTTAAAGCTTTTGTGTTGGTTCTATGATAAGCTTCTT  1000

seq1  TTTAATAACA-TTTGTATGGTG--TCCTTTACTTCCTCCATACCACCTCT  1038
      |||||| ||| |||||||||||   ||||||||||||||||||  | |||
seq2  TTTAATTACATTTTGTATGGTGGTCCCTTTACTTCCTCCATACACCTTCT  1050

seq1  TCACACCTATTGTGGT-GTGAAAGAGGG  1065
       |||||||| |||||| ||| |||||||
seq2  ACACACCTAATGTGGTGGTGGAAGAGGG  1078