BAC Information

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BAC

Clone NameB6Ng01-190M22
Chromosome9 (Build37)
Map Location 73,936,967 - 73,938,024
singlet/doubletsinglet
Overlap genenone
Upstream geneRab27a, 2410004A20Rik, BC003885, EG436081, Unc13c
Downstream geneWdr72, Nr1h2-ps, LOC100040764, Onecut1, BC031353, Arpp19, LOC100040812, Myo5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190M22.bB6Ng01-190M22.g
ACCGA014472GA014473
length1,0611,162
definitionB6Ng01-190M22.b B6Ng01-190M22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaagagatattaatttttttcagtatatatagcaactactgca
aaactagcattgtaccacataacttctgaagaattaatgcactggggcca
cagttatctataactattaaaaccattgagttgcttgatagatttaaaat
accaggtcaggctgatcacagcaaaccagactcctagtctttaaaacata
tacggaatgtaagacctaaagataatataagacccagaagaaaatataaa
actttgaataggaatcaaccagcacatttcagaatgagaatccatagtat
tatcccaatatccacctctgtcccactgaagaagtgacaacagcaagagg
agatttatagattcaaatgagagtaagactttgagctccagctccaatgt
gctaatgttagtcagaagagagctggagaacctctgtaagcatccccaaa
gcagagaattagtgcagaaagcaaggagaagtagtgcacacagtagggta
tttatgtgtatgtacatgcatccttaatacatacgcaaccaacaacaaag
catcaaaatataaaaggcaagacgtgacaaaggtgccaaggataaatgga
taaagctttcactattcttggagatctgaagaaatcctctttcagagatt
tatcagtccatccgaggaaataaaaaaatgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgaatgaactgaccaatgctacccatcaactgtgcctagttg
ccttttaaagaaggtttcattaaactatagcagagtaaatattctgaagc
tcacactgagcagtcgcaaagattgaccatgtggtatgcaataagctaca
tattaaaaactttaagctataaagccacacagaattaaactagacaatat
atcactgaaatcgctatagattcatccccacatgctaagtaacgtgtgct
cggtaaaaagtttcaaactgaaaatatttcaaagtaaatgaaaagagaac
tcattgactttgtataataacagtgaagaacatggcttcaaagaagaaat
atatggtgttt

gaattctcacctaaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatctgtctggcggttcctca
gaaaattggacatagtactaccgaaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcttagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctgaagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttccaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacaggctcccaat
ggaggagctagagaagtaccagagctaaagggatctgcaccctatagtga
tcacattatgactaccagtacccgagctctgacctctagctgcatatata
tcaaagatgacttagtccgcatcactggaaagaagagctcatgaccgcaa
cttatattgcctgacggacgtcatgtcaagggaatgtccgttatgggata
gtgttgatgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_73936967_73938024
seq2: B6Ng01-190M22.b_50_1110 (reverse)

seq1  AAACACCATATATTTC-TCTCTG-AGCCATG-TCTTCACTG-TATTATAC  46
      |||||||||||||||| ||| || ||||||| ||||||||| ||||||||
seq2  AAACACCATATATTTCTTCTTTGAAGCCATGTTCTTCACTGTTATTATAC  50

seq1  AAAGTCAATGAGTTCTCTTTTCATTTACTTTGAAATATTTTCAGTTTGAA  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAATGAGTTCTCTTTTCATTTACTTTGAAATATTTTCAGTTTGAA  100

seq1  ACTTTTTTACCGAGCACACGTTACTTAGCATGTGGGGATGAATCTATAGC  146
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-TTTTTACCGAGCACACGTTACTTAGCATGTGGGGATGAATCTATAGC  149

seq1  GATTTCAGTGATATATTGTCTAGTTTAATTCTGTGTGGCTTTATAGCTTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAGTGATATATTGTCTAGTTTAATTCTGTGTGGCTTTATAGCTTA  199

seq1  AAGTTTTTAATATGTAGCTTATTGCATACCACATGGTCAATCTTTGCGAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTAATATGTAGCTTATTGCATACCACATGGTCAATCTTTGCGAC  249

seq1  TGCTCAGTGTGAGCTTCAGAATATTTACTCTGCTATAGTTTAATGAAACC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGTGTGAGCTTCAGAATATTTACTCTGCTATAGTTTAATGAAACC  299

seq1  TTCTTTAAAAGGCAACTAGGCACAGTTGATGGGTAGCATTGGTCAGTTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAAAGGCAACTAGGCACAGTTGATGGGTAGCATTGGTCAGTTCA  349

seq1  TTCACACACACACACACACACACACACACACACATTTTTTTATTTCCTCG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACACACACACACACACACACACACACACATTTTTTTATTTCCTCG  399

seq1  GATGGACTGATAAATCTCTGAAAGAGGATTTCTTCAGATCTCCAAGAATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACTGATAAATCTCTGAAAGAGGATTTCTTCAGATCTCCAAGAATA  449

seq1  GTGAAAGCTTTATCCATTTATCCTTGGCACCTTTGTCACGTCTTGCCTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGCTTTATCCATTTATCCTTGGCACCTTTGTCACGTCTTGCCTTT  499

seq1  TATATTTTGATGCTTTGTTGTTGGTTGCGTATGTATTAAGGATGCATGTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTGATGCTTTGTTGTTGGTTGCGTATGTATTAAGGATGCATGTA  549

seq1  CATACACATAAATACCCTACTGTGTGCACTACTTCTCCTTGCTTTCTGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACATAAATACCCTACTGTGTGCACTACTTCTCCTTGCTTTCTGCA  599

seq1  CTAATTCTCTGCTTTGGGGATGCTTACAGAGGTTCTCCAGCTCTCTTCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCTCTGCTTTGGGGATGCTTACAGAGGTTCTCCAGCTCTCTTCTG  649

seq1  ACTAACATTAGCACATTGGAGCTGGAGCTCAAAGTCTTACTCTCATTTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACATTAGCACATTGGAGCTGGAGCTCAAAGTCTTACTCTCATTTGA  699

seq1  ATCTATAAATCTCCTCTTGCTGTTGTCACTTCTTCAGTGGGACAGAGGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAAATCTCCTCTTGCTGTTGTCACTTCTTCAGTGGGACAGAGGTG  749

seq1  GATATTGGGATAATACTATGGATTCTCATTCTGAAATGTGCTGGTTGATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGGGATAATACTATGGATTCTCATTCTGAAATGTGCTGGTTGATT  799

seq1  CCTATTCAAAGTTTTATATTTTCTTCTGGGTCTTATATTATCTTTAGGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCAAAGTTTTATATTTTCTTCTGGGTCTTATATTATCTTTAGGTC  849

seq1  TTACATTCCGTATATGTTTTAAAGACTAGGAGTCTGGTTTGCTGTGATCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCCGTATATGTTTTAAAGACTAGGAGTCTGGTTTGCTGTGATCA  899

seq1  GCCTGACCTGGTATTTTAAATCTATCAAGCAACTCAATGGTTTTAATAGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACCTGGTATTTTAAATCTATCAAGCAACTCAATGGTTTTAATAGT  949

seq1  TATAGATAACTGTGGCCCCAGTGCATTAATTCTTCAGAAGTTATGTGGTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATAACTGTGGCCCCAGTGCATTAATTCTTCAGAAGTTATGTGGTA  999

seq1  CAATGCTAGTTTTGCAGTAGTTGCTATATATACTGAAAAAAATTAATATC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTAGTTTTGCAGTAGTTGCTATATATACTGAAAAAAATTAATATC  1049

seq1  TCTTCTGAATTC  1058
      ||||||||||||
seq2  TCTTCTGAATTC  1061


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