BAC Information

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BAC

Clone NameB6Ng01-191D10
Chromosome9 (Build37)
Map Location 113,179,371 - 113,298,501
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC620760, LOC100043800, EG622110, LOC100039391, LOC100043801
Downstream geneLOC100043802, LOC636680, Pdcd6ip, Clasp2, Ubp1, Fbxl2, Susd5, EG665719, 4921528I07Rik, Bcl2a1c, 4930520O04Rik, Crtap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D10.bB6Ng01-191D10.g
ACCGA014768GA014769
length1,094338
definitionB6Ng01-191D10.b B6Ng01-191D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,179,371 - 113,180,442)(113,298,165 - 113,298,501)
sequence
gaattcatatgggacacctggcacatttctatgcatttgcctttatcatg
tgaccatacctacaacccagtggttataagcatctactaatctgattttt
agaagtatattttaagacttcaaataacttgccaagatggtatcgctggt
gagatttgaacgtagggcagtgcaattttaaaggtgcagaggcttttctc
atcgataggctgaagtctctctgctccaagccactgagcagctcagccag
gaggtgatttgggacattaaagaaaggattctttactctccaaaaagatt
cgcaacagggatccttggaatagccagctcccctattgtgctggaaatat
tcaagccacagaagtctctatttatgaggaacgtttctataccacatctg
ctgtctacagcagagctggctcatggtattgcagcttcctcggctatgct
gatgaagggcctgtgagatcaagaggagactgagaagacagaaattttgt
gattggcataatatgcgggacacaatgaacactgagaaacaatccagcac
tatcacacgagccagtctaagagagactgcaaagatggccataatgtctg
tcaatcaagacataatgagaagttgggaagtggccaaatgagcaaagtgc
ttgctttgcaaacctgagaacctgagtcctatctccagaacccatttgaa
agtcagtcagagccaggcagtggtggcacatgtctttaatcccagcactt
gggaggcagacgcaggcagatttctgagttcaagaccagcctggttctac
aaagtgagttccaggatagcccagggctgtacttatataaataataataa
taataattaataataataataataataatatagaagaagaagtcagtcca
gacagaatcaaagaaaacaaaaaaggaaccaaagctagatgtagtcccaa
tattccgggacagaggctggaaggatcccttggggcctcactgggcaacc
aaccttgtctactggtgttagttccatgcccagtgaaaaaccttcattat
ttaacaaaaacaaaaatcaaaaaacaaagatgggacagaccctg
cagggccaggaagcaggagtaggtgggttggggagcaggggaaggggtgg
gataggggatttccagagaggaaactaggaaaggggataacatttgaaat
ataaataaagaaaatatctaattaaaaaataaaaggaaaaaatctttgct
acagacagttccctcctcaagatactgctcatctgtgcaacctttcaaat
ttgaaataatttaaagtctagcctccttttctgtgtcacacaaatgaaat
tggatccagaaggacttttctctaccagccttgtttgcccctttttttgg
tcctgattatgacagaggagaggtggggggaggagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_113179371_113180442
seq2: B6Ng01-191D10.b_46_1139

seq1  GAATTCATATGGGACACCTGGCACATTTCTATGCATTTGCCTTTATCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGGGACACCTGGCACATTTCTATGCATTTGCCTTTATCATG  50

seq1  TGACCATACCTACAACCCAGTGGTTATAAGCATCTACTAATCTGATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATACCTACAACCCAGTGGTTATAAGCATCTACTAATCTGATTTTT  100

seq1  AGAAGTATATTTTAAGACTTCAAATAACTTGCCAAGATGGTATCGCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTATATTTTAAGACTTCAAATAACTTGCCAAGATGGTATCGCTGGT  150

seq1  GAGATTTGAACGTAGGGCAGTGCAATTTTAAAGGTGCAGAGGCTTTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGAACGTAGGGCAGTGCAATTTTAAAGGTGCAGAGGCTTTTCTC  200

seq1  ATCGATAGGCTGAAGTCTCTCTGCTCCAAGCCACTGAGCAGCTCAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATAGGCTGAAGTCTCTCTGCTCCAAGCCACTGAGCAGCTCAGCCAG  250

seq1  GAGGTGATTTGGGACATTAAAGAAAGGATTCTTTACTCTCCAAAAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGATTTGGGACATTAAAGAAAGGATTCTTTACTCTCCAAAAAGATT  300

seq1  CGCAACAGGGATCCTTGGAATAGCCAGCTCCCCTATTGTGCTGGAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAACAGGGATCCTTGGAATAGCCAGCTCCCCTATTGTGCTGGAAATAT  350

seq1  TCAAGCCACAGAAGTCTCTATTTATGAGGAACGTTTCTATACCACATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCACAGAAGTCTCTATTTATGAGGAACGTTTCTATACCACATCTG  400

seq1  CTGTCTACAGCAGAGCTGGCTCATGGTATTGCAGCTTCCTCGGCTATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTACAGCAGAGCTGGCTCATGGTATTGCAGCTTCCTCGGCTATGCT  450

seq1  GATGAAGGGCCTGTGAGATCAAGAGGAGACTGAGAAGACAGAAATTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGGCCTGTGAGATCAAGAGGAGACTGAGAAGACAGAAATTTTGT  500

seq1  GATTGGCATAATATGCGGGACACAATGAACACTGAGAAACAATCCAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCATAATATGCGGGACACAATGAACACTGAGAAACAATCCAGCAC  550

seq1  TATCACACGAGCCAGTCTAAGAGAGACTGCAAAGATGGCCATAATGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACACGAGCCAGTCTAAGAGAGACTGCAAAGATGGCCATAATGTCTG  600

seq1  TCAATCAAGACATAATGAGAAGTTGGGAAGTGGCCAAATGAGCAAAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAGACATAATGAGAAGTTGGGAAGTGGCCAAATGAGCAAAGTGC  650

seq1  TTGCTTTGCAAACCTGAGAACCTGAGTCCTATCTCCAGAACCCATTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGCAAACCTGAGAACCTGAGTCCTATCTCCAGAACCCATTTGAA  700

seq1  AGTCAGTCAGAGCCAGGCAGTGGTGGCACATGTCTTTAATCCCAGCACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCAGAGCCAGGCAGTGGTGGCACATGTCTTTAATCCCAGCACTT  750

seq1  GGGAGGCAGACGCAGGCAGATTTCTGAGTTCAAGACCAGCCTGG-TCTAC  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGAGGCAGACGCAGGCAGATTTCTGAGTTCAAGACCAGCCTGGTTCTAC  800

seq1  AAAGTGAGTTCCAGGATAG-CCAGGGCTGTACAT-----AATAATA--AA  841
      ||||||||||||||||||| |||||||||||| |     |||||||  ||
seq2  AAAGTGAGTTCCAGGATAGCCCAGGGCTGTACTTATATAAATAATAATAA  850

seq1  TAATAA-TAATAATAATAATAATAATA--ATAGAAGAAAGAAAGTCAGT-  887
      |||||| ||||||||||||||||||||  |||||||||   |||||||| 
seq2  TAATAATTAATAATAATAATAATAATAATATAGAAGAA--GAAGTCAGTC  898

seq1  CAGACAGAAACAAAG-AAACAAAAAAGGAACCAAAGCTAGATGTAGTCCC  936
      ||||||||| ||||| ||||||||||||||||||||||||||||||||||
seq2  CAGACAGAATCAAAGAAAACAAAAAAGGAACCAAAGCTAGATGTAGTCCC  948

seq1  AATATTTCGGGACAGAGGCTGG-AGGATCCCT--GGGGCTCACTGGGCAA  983
      |||||| ||||||||||||||| |||||||||  ||| ||||||||||||
seq2  AATATTCCGGGACAGAGGCTGGAAGGATCCCTTGGGGCCTCACTGGGCAA  998

seq1  CCAACCTTGTCTACT-GTGTTAGTTCCATG-CCAGTGAAAAACC-TCA-T  1029
      ||||||||||||||| |||||||||||||| ||||||||||||| ||| |
seq2  CCAACCTTGTCTACTGGTGTTAGTTCCATGCCCAGTGAAAAACCTTCATT  1048

seq1  ATTTAACAAAA--CAAAATCAAAAAACAAAGAT-GGACAGAACCTG  1072
      |||||||||||   ||||||||||||||||||| ||||||| ||||
seq2  ATTTAACAAAAACAAAAATCAAAAAACAAAGATGGGACAGACCCTG  1094

seq1: chr9_113298165_113298501
seq2: B6Ng01-191D10.g_73_409 (reverse)

seq1  CCCTCCTCCCCCCACCTCTCCTCTGTCATAATCAGGACCAAAAAAAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCCCCCCACCTCTCCTCTGTCATAATCAGGACCAAAAAAAGGGG  50

seq1  CAAACAAGGCTGGTAGAGAAAAGTCCTTCTGGATCCAATTTCATTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAGGCTGGTAGAGAAAAGTCCTTCTGGATCCAATTTCATTTGTGT  100

seq1  GACACAGAAAAGGAGGCTAGACTTTAAATTATTTCAAATTTGAAAGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGAAAAGGAGGCTAGACTTTAAATTATTTCAAATTTGAAAGGTTG  150

seq1  CACAGATGAGCAGTATCTTGAGGAGGGAACTGTCTGTAGCAAAGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGAGCAGTATCTTGAGGAGGGAACTGTCTGTAGCAAAGATTTTT  200

seq1  TCCTTTTATTTTTTAATTAGATATTTTCTTTATTTATATTTCAAATGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTATTTTTTAATTAGATATTTTCTTTATTTATATTTCAAATGTTA  250

seq1  TCCCCTTTCCTAGTTTCCTCTCTGGAAATCCCCTATCCCACCCCTTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTCCTAGTTTCCTCTCTGGAAATCCCCTATCCCACCCCTTCCCC  300

seq1  TGCTCCCCAACCCACCTACTCCTGCTTCCTGGCCCTG  337
      |||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCAACCCACCTACTCCTGCTTCCTGGCCCTG  337