BAC Information

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BAC

Clone NameB6Ng01-191M13
Chromosome9 (Build37)
Map Location 86,686,660 - 86,863,248
singlet/doubletdoublet
Overlap geneSnap91
Upstream geneEG434426, 9330154J02Rik, Tpbg, 2610018I03Rik, Pgm3, Rwdd2, Mod1, Prss35
Downstream geneC030002E08Rik, Cyb5r4, LOC666777, LOC244958, LOC100039510, 4922501C03Rik, LOC671706, Tbx18, LOC671731
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191M13.bB6Ng01-191M13.g
ACCGA015191GA015192
length1,150969
definitionB6Ng01-191M13.b B6Ng01-191M13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,862,099 - 86,863,248)(86,686,660 - 86,687,618)
sequence
gaattctcccctggacccatgggaaagggtgaggaaaatgagaagtccca
ctgatctgacaagacagggaaggagagtaggctaggactcaggaagaaca
gtaacaaccctgaaacaggacgtcatccttgaataatatgcagggtgttg
tcacttgcccatcccctgctagtcaatttgggatcaatcagttctgtgcc
ttccaccaactttgtttatgagccagtgtgtcctaagaccctgtgtttag
tccttaggtcttttgctctgatcactctccccaggccattggttctcagc
ctgtgggtcatgaccttttgggggtcaaatgaccctttcacaagtcttgc
ctaagaccattggaaaacacagtatttacattacaatacaaaagaacagc
aaaactacagttatgaactagcaatgaaaatccttctatggttgggggtc
accacacaagaggaactgtattaagggtcacagcattaggaaggttgaga
accactgcactaagctttcactgttttctttgtagccaatggattgggaa
gccttttcccatcttcctccttctcccctaattcctatttccactgtgat
gctcttatttcaggcttcattatatgtggctcacattagtaaaggttgtt
caaattggcctctagtttcttccatttttccaataagtgcttcacattgc
cacaactactactatctgtcaaacaaagagacctgtcttgtcacttaata
accacagaccttcaaggacacatcattatccagagcaaagtccatgatac
acaggagtccttactacccaactaccttctctcctgctcattgaccttct
ccaccagctcagggctggcgtggtatcagctgcttttcctcttttcttga
caaactcattcattgcttatggacagttcagatgttgttttcaataactt
acagaaggcagctttcctgggaagatgcatacctcattggccttacctgg
attcctctagcaagcattgtatattttgatgttagcagttgttagagttg
attaccattgtaatcgacttgtcctatttgacttcatatagcctgtacat
ccttaatagatgtgagctccttagccaggacttatagtgtcccttatttt

gaattctgagtcttacagcacatatgataaacctataaggtattagaaca
tcttttgctacctgagctcccccacccatgaccctctggagacagctcta
aagtctcgatctaggggaagcactcaccagataagaggtcagcagtgaga
gaactctcaggcaccggagaggcccctcgtggcggggaggagaaagcatc
ttccaaaagtgaaagaaaccaaaaccaagcagaagtaagtagcagaaagc
tgaaatcagagtcacatgtctaacaagtgcgttatcacagcaactataaa
gggcttgaccaagggtcattgctttgctttgctttacctgtgccaaacag
gtctatgctaggagccgcgtctggcttaggtgctgcagcaacttcaggag
cagaatcaaacaaatctaagaccaagaacacacaggccttcactcagtct
gaaaatcaagcctgtgacagcatcacttgccagttttctgacagagcatt
cacaagaactctgggttaagtagcaaatggactctagagaaccatttaac
tacacttttcatgcatatgaggcatgtgtgcattacaggaccaggttcaa
gccaccagatgagagagattgagtaacagtgacaaattaccaccaaagat
atctagagcaggaggagcagcggcggtggtggcagcagcagcagaggtgg
tggcagtggtggtagctgcagcggcggcggtggtggtggcagcagtggct
gccacagcccgtgggagcaggataaggagcagtttgcgggaactggaggg
gctgtgctagctgtaggggtaactacaaggagcgctggtcttaggtggct
tcaattgcaacagaggtccagctccagtgcagcttctgcgctaaccttca
gaatgggggcaaaagggtcttttggaaagcaaatgtagagaacctacctc
acacagcatcatgtcagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_86862099_86863248
seq2: B6Ng01-191M13.b_43_1192 (reverse)

seq1  AAAATAAAGGACACTAT-AGTTCTTGCTAAGGAGCTCAACATCTAT--AA  47
      ||||||| ||||||||| ||| || |||||||||||| ||||||||  | 
seq2  AAAATAAGGGACACTATAAGTCCTGGCTAAGGAGCTC-ACATCTATTAAG  49

seq1  GATGTACAGGCTATATGAAGGTCAAATA-GACAAGTCGATTACAATGGTA  96
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  GATGTACAGGCTATATGAA-GTCAAATAGGACAAGTCGATTACAATGGTA  98

seq1  ATCAACTCTTACAACTGCT-ACATCAAAATTATACAATGCTTGCTAGAGG  145
      ||||||||| ||||||||| ||||||||| ||||||||||||||||||||
seq2  ATCAACTCTAACAACTGCTAACATCAAAA-TATACAATGCTTGCTAGAGG  147

seq1  AATCCAGGTAAGGCCAATGAGGTATGCATTCTTCCCAGGAAAGCCTGCCT  195
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  AATCCAGGTAAGGCCAATGAGGTATGCA-TCTTCCCAGGAAAG-CTGCCT  195

seq1  TCTGTAAGTTATTGAAAACAACATCTGAACTGTCCATAAGCAATGAATGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGTTATTGAAAACAACATCTGAACTGTCCATAAGCAATGAATGA  245

seq1  GTTTGTCAAGAAAAGAGGAAAAGCAGCTGATACCACGCCAGCCCTGAGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCAAGAAAAGAGGAAAAGCAGCTGATACCACGCCAGCCCTGAGCT  295

seq1  GGTGGAGAAGGTCAATGAGCAGGAGAGAAGGTAGTTGGGTAGTAAGGACT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGAAGGTCAATGAGCAGGAGAGAAGGTAGTTGGGTAGTAAGGACT  345

seq1  CCTGTGTATCATGGACTTTGCTCTGGATAATGATGTGTCCTTGAAGGTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATCATGGACTTTGCTCTGGATAATGATGTGTCCTTGAAGGTCT  395

seq1  GTGGTTATTAAGTGACAAGACAGGTCTCTTTGTTTGACAGATAGTAGTAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATTAAGTGACAAGACAGGTCTCTTTGTTTGACAGATAGTAGTAG  445

seq1  TTGTGGCAATGTGAAGCACTTATTGGAAAAATGGAAGAAACTAGAGGCCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCAATGTGAAGCACTTATTGGAAAAATGGAAGAAACTAGAGGCCA  495

seq1  ATTTGAACAACCTTTACTAATGTGAGCCACATATAATGAAGCCTGAAATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACAACCTTTACTAATGTGAGCCACATATAATGAAGCCTGAAATA  545

seq1  AGAGCATCACAGTGGAAATAGGAATTAGGGGAGAAGGAGGAAGATGGGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATCACAGTGGAAATAGGAATTAGGGGAGAAGGAGGAAGATGGGAA  595

seq1  AAGGCTTCCCAATCCATTGGCTACAAAGAAAACAGTGAAAGCTTAGTGCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTCCCAATCCATTGGCTACAAAGAAAACAGTGAAAGCTTAGTGCA  645

seq1  GTGGTTCTCAACCTTCCTAATGCTGTGACCCTTAATACAGTTCCTCTTGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCTCAACCTTCCTAATGCTGTGACCCTTAATACAGTTCCTCTTGT  695

seq1  GTGGTGACCCCCAACCATAGAAGGATTTTCATTGCTAGTTCATAACTGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGACCCCCAACCATAGAAGGATTTTCATTGCTAGTTCATAACTGTA  745

seq1  GTTTTGCTGTTCTTTTGTATTGTAATGTAAATACTGTGTTTTCCAATGGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTGTTCTTTTGTATTGTAATGTAAATACTGTGTTTTCCAATGGT  795

seq1  CTTAGGCAAGACTTGTGAAAGGGTCATTTGACCCCCAAAAGGTCATGACC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCAAGACTTGTGAAAGGGTCATTTGACCCCCAAAAGGTCATGACC  845

seq1  CACAGGCTGAGAACCAATGGCCTGGGGAGAGTGATCAGAGCAAAAGACCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTGAGAACCAATGGCCTGGGGAGAGTGATCAGAGCAAAAGACCT  895

seq1  AAGGACTAAACACAGGGTCTTAGGACACACTGGCTCATAAACAAAGTTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTAAACACAGGGTCTTAGGACACACTGGCTCATAAACAAAGTTGG  945

seq1  TGGAAGGCACAGAACTGATTGATCCCAAATTGACTAGCAGGGGATGGGCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGCACAGAACTGATTGATCCCAAATTGACTAGCAGGGGATGGGCA  995

seq1  AGTGACAACACCCTGCATATTATTCAAGGATGACGTCCTGTTTCAGGGTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAACACCCTGCATATTATTCAAGGATGACGTCCTGTTTCAGGGTT  1045

seq1  GTTACTGTTCTTCCTGAGTCCTAGCCTACTCTCCTTCCCTGTCTTGTCAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGTTCTTCCTGAGTCCTAGCCTACTCTCCTTCCCTGTCTTGTCAG  1095

seq1  ATCAGTGGGACTTCTCATTTTCCTCACCCTTTCCCATGGGTCCAGGGGAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGGGACTTCTCATTTTCCTCACCCTTTCCCATGGGTCCAGGGGAG  1145

seq1  AATTC  1150
      |||||
seq2  AATTC  1150

seq1: chr9_86686660_86687618
seq2: B6Ng01-191M13.g_69_1037

seq1  GAATTCTGAGTCTTACAGCACATATGATAAACCTATAAGGTATTAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTCTTACAGCACATATGATAAACCTATAAGGTATTAGAACA  50

seq1  TCTTTTGCTACCTGAGCTCCCCCACCCATGACCCTCTGGAGACAGCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGCTACCTGAGCTCCCCCACCCATGACCCTCTGGAGACAGCTCTA  100

seq1  AAGTCTCGATCTAGGGGAAGCACTCACCAGATAAGAGGTCAGCAGTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCGATCTAGGGGAAGCACTCACCAGATAAGAGGTCAGCAGTGAGA  150

seq1  GAACTCTCAGGCACCGGAGAGGCCCCTCGTGGCGGGGAGGAGAAAGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTCAGGCACCGGAGAGGCCCCTCGTGGCGGGGAGGAGAAAGCATC  200

seq1  TTCCAAAAGTGAAAGAAACCAAAACCAAGCAGAAGTAAGTAGCAGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAAGTGAAAGAAACCAAAACCAAGCAGAAGTAAGTAGCAGAAAGC  250

seq1  TGAAATCAGAGTCACATGTCTAACAAGTGCGTTATCACAGCAACTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCAGAGTCACATGTCTAACAAGTGCGTTATCACAGCAACTATAAA  300

seq1  GGGCTTGACCAAGGGTCATTGCTTTGCTTTGCTTTACCTGTGCCAAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGACCAAGGGTCATTGCTTTGCTTTGCTTTACCTGTGCCAAACAG  350

seq1  GTCTATGCTAGGAGCCGCGTCTGGCTTAGGTGCTGCAGCAACTTCAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGCTAGGAGCCGCGTCTGGCTTAGGTGCTGCAGCAACTTCAGGAG  400

seq1  CAGAATCAAACAAATCTAAGACCAAGAACACACAGGCCTTCACTCAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCAAACAAATCTAAGACCAAGAACACACAGGCCTTCACTCAGTCT  450

seq1  GAAAATCAAGCCTGTGACAGCATCACTTGCCAGTTTTCTGACAGAGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAAGCCTGTGACAGCATCACTTGCCAGTTTTCTGACAGAGCATT  500

seq1  CACAAGAACTCTGGGTTAAGTAGCAAATGGACTCTAGAGAACCATTTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAACTCTGGGTTAAGTAGCAAATGGACTCTAGAGAACCATTTAAC  550

seq1  TACACTTTTCATGCATATGAGGCATGTGTGCATTACAGGACCAGGTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTTCATGCATATGAGGCATGTGTGCATTACAGGACCAGGTTCAA  600

seq1  GCCACCAGATGAGAGAGATTGAGTAACAGTGACAAATTACCACCAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGATGAGAGAGATTGAGTAACAGTGACAAATTACCACCAAAGAT  650

seq1  ATCTAGAGCAGGAGGAGCAGCGGCGGTGGTGGCAGCAGCAGCAGAGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAGCAGGAGGAGCAGCGGCGGTGGTGGCAGCAGCAGCAGAGGTGG  700

seq1  TGGCAGTGGTGGTAGCTGCACGCGGCGGACGGTGGTGGTGGCAGCAGTGG  750
      |||||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  TGGCAGTGGTGGTAGCTGCA-GCGGCGG-CGGTGGTGGTGGCAGCAGTGG  748

seq1  CTGCCACAG-CCGTGGGAGCAGGAGAAGGAGCAG-TTGCGGGAACTGGAG  798
      ||||||||| |||||||||||||| ||||||||| |||||||||||||||
seq2  CTGCCACAGCCCGTGGGAGCAGGATAAGGAGCAGTTTGCGGGAACTGGAG  798

seq1  GGGCTGTGCTAGCTGTAGGGGTAACTAC-AGGAGCGCTGGTCTCAGGTGG  847
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  GGGCTGTGCTAGCTGTAGGGGTAACTACAAGGAGCGCTGGTCTTAGGTGG  848

seq1  CTTC-ATTGCAA-AGAGGTCCAGCTCAGGTGCAGCCTCTGCGCT-ACCTT  894
      |||| ||||||| |||||||||||||  ||||||| |||||||| |||||
seq2  CTTCAATTGCAACAGAGGTCCAGCTCCAGTGCAGCTTCTGCGCTAACCTT  898

seq1  CAGA--TGGGGCAAAAGGGTCTTTTGGAAAGCAAA-GTAGAGA--CACAC  939
      ||||   |||||||||||||||||||||||||||| |||||||  |   |
seq2  CAGAATGGGGGCAAAAGGGTCTTTTGGAAAGCAAATGTAGAGAACCTACC  948

seq1  ACACACAGCATCA-GTCAGGA  959
       |||||||||||| |||||||
seq2  TCACACAGCATCATGTCAGGA  969