BAC Information

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BAC

Clone NameB6Ng01-192I15
Chromosome9 (Build37)
Map Location 50,694,580 - 50,695,692
singlet/doubletsinglet
Overlap genePpp2r1b
Upstream geneEG667975, LOC100042806, LOC100043346, LOC672372, 1600029D21Rik, Pts, Bcdo2, Tex12, Il18, Sdhd, Timm8b, AU019823, Pih1d2, Dlat, Dixdc1, 2310030G06Rik, Hspb2, Cryab, 1110032A03Rik, D630004A14Rik, Alg9
Downstream geneSnf1lk2, Layn, 4833427G06Rik, Btg4, LOC100042825, Pou2af1, Gm684, 1810046K07Rik, LOC100042854, LOC640374, LOC668070, Arhgap20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192I15.bB6Ng01-192I15.g
ACCGA015754GA015755
length1,2251,134
definitionB6Ng01-192I15.b B6Ng01-192I15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaaaaggaacctcaaatggttgagaaatacttgaaccatca
ggggaatgcaaattgaaactactttttgggatttcatcttacatccatca
gaatggctcagctcagttagacaagtggtgttggagatgtggagtatggg
aaacttgcatccactgatggtgggagtgcaaacttggacagactcgactg
ccatcagtggggcagttcctcaggaagatggaaatccatttacctccggg
tccagccatactcaaaggacacgccatttccccacagggacagctgtgta
accatggtccttggtctctggaatcaacctagatcccctcaacaggaggg
tggatttttaaatgttgtacacttatacaatggaatattactcagccttt
taacacaatgatatcatgacatctgtgagtaaacggagggaactagaaga
aaccatcctgagtgaggtatcctggcccagaaggacaaatatactgtata
tttgtttatacatgtatattagctgttaagtcagtacctagaaccacaga
tgtggagtatggagtaagggacttgaggggacagagagctctccttggga
aagggaaatagaatggatagtcatggatggagcatagagtcatgcaggaa
caggaagctcagtggggagaggaggacacgggagggaatgtgaggagaga
cagagaaaactaagggccatttgaggcatagtatgggaacctcagttagg
aaaacgttgctaaaatatagacatacattaaggtaatttaaatgaagttc
caaataaagggagctatggggccacactggacatctcctgtcaacaaatc
tagtaccaagattggctatatctgagttattggccaagggggattccacg
ggaatcccaaaaccaccccagtctgttgctaagtctataggttgctctgc
acaaacacagcaaggcctatactgaagtcagcacctacattgattgttga
agagtcaagatggggtctacagggcgttaccttctattgtgctacagaaa
gtactcttgcccttacccaaagagaaacaagcaaactccaccaccagcaa
ccttcatccattccccacctcccaaagaaagaggaaaaggcatgaaatga
ccgagagaccattcggcctaattcgaaccgttttcctgtgtaactgagta
cattcactcgtgaatttacgggtgc
gaattcctctgtatctatggttacagagccagggagccctgctccctccc
tttgtatgtgcttctgatgggatttcccaagtactgctagactgatctga
actggcagtgagggggtaaaacaagcaaacacttaagtgggtgagtaacg
actgactgcagaggcgcagactaccctggagccaaacccccaaagctggc
tgggcagaaaggtcagaagattcaaagcccagagaaaatgaggcagctga
gtgttgaacctctggagctgagtcactccctccacagataagttttgaaa
gcctcttactccgtcttcctcctccttattcctcaaagatggaataacaa
agccttggctgcccaagagagggcctgagaattctgacccccaagacacc
ccaccaagctgatgggatgggttcagctgagctatgaggatggcaaagca
caccatgcaagggacccagctcattgcctgtgcctcacctgagacccact
ggaactacaagtcaccacagaaacccagaagtttactcatcaaagtgaag
gccaaagggcaggcaggcagtcagaagggtaccaggaaatgaagagagag
gctggctccccagtccaaaccagtgggtagctagacaggcactacaggtg
agtagtaccactccgtcctgtcagatagcacaggaggcagcaacaaatct
gaactcaatccttagtccctagacctgccactaacctatgcaggtcactc
taagggctcactgtccccacccgtgatgggagcagcctgactcagcacct
ccctttaacatgggaaacattatgatttggaccaactccccttgaccact
ttgccactactctgtctgacactaggctaggaaatggctatgcaggtgcc
tgtgaagtctcttctccactaactgaaaggtgattacccctcactggtaa
ctcagttcctggagatctctgaatttttggcagtggaggtttctgggtat
aactgggtcatgagtgccacactttagttccaggcccttaggattcttga
gggtcatcttcacttgtctctttgactggatttggatcatggggggaaat
tacctctttgccattctgtctggtgaggaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_50694580_50695692
seq2: B6Ng01-192I15.g_69_1202 (reverse)

seq1  AAACTTCCTCA-CAGACAGA--TGCAGA---GTA--TTTCCCCCATGATT  42
      ||||||||||| ||||||||   ||| |   |||  || ||||||||| |
seq2  AAACTTCCTCACCAGACAGAATGGCAAAGAGGTAATTTCCCCCCATGA-T  49

seq1  CCAAATCCAGTCAAGGAGAC-AGTGAAGATGAACCCTC-AGATTCTTA--  88
      |||||||||||||| ||||| |||||||||| |||||| ||| || ||  
seq2  CCAAATCCAGTCAAAGAGACAAGTGAAGATG-ACCCTCAAGAATCCTAAG  98

seq1  GGGCTGGACTTAAGTTGTGGCACTCATGA-CCAGTGTTACCCAGAA--CT  135
      || |||||  |||  |||||||||||||| |||||  |||||||||  ||
seq2  GGCCTGGAACTAAAGTGTGGCACTCATGACCCAGTTATACCCAGAAACCT  148

seq1  -CACTGCCAAAAATTCAGAGATCT-CAGG-ACTGAGTTACCAGTGA-GGG  181
       ||||||||||||||||||||||| |||| |||||||||||||||| |||
seq2  CCACTGCCAAAAATTCAGAGATCTCCAGGAACTGAGTTACCAGTGAGGGG  198

seq1  TAATCACCTTTCAGTTAGT-GAGAAGAGACTTCACAGGCACCTGCATAGC  230
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAATCACCTTTCAGTTAGTGGAGAAGAGACTTCACAGGCACCTGCATAGC  248

seq1  CATTTCCTAGCCTAGTGTCAGACAGAGTAGTGGC-AAGTGGTCAAGGGGA  279
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CATTTCCTAGCCTAGTGTCAGACAGAGTAGTGGCAAAGTGGTCAAGGGGA  298

seq1  GTTGGTCC-AATCATAATGTTT-CCATGTTAAAGGGAGGTGCTGAGTCAG  327
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  GTTGGTCCAAATCATAATGTTTCCCATGTTAAAGGGAGGTGCTGAGTCAG  348

seq1  GCTGCTCCCATCACGGGTGGGGACAGTGAGCCCTTAGAGTGACCTGCATA  377
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCCCATCACGGGTGGGGACAGTGAGCCCTTAGAGTGACCTGCATA  398

seq1  GGTTAGTGGCAGGTCTAGGGACTAAGGATTGAGTTCAGATTTGTTGCTGC  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTGGCAGGTCTAGGGACTAAGGATTGAGTTCAGATTTGTTGCTGC  448

seq1  CTCCTGTGCTATCTGACAGGACGGAGTGGTACTACTCACCTGTAGTGCCT  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGCTATCTGACAGGACGGAGTGGTACTACTCACCTGTAGTGCCT  498

seq1  GTCTAGCTACCCACTGGTTTGGACTGGGGAGCCAGCCTCTCTCTTCATTT  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGCTACCCACTGGTTTGGACTGGGGAGCCAGCCTCTCTCTTCATTT  548

seq1  CCTGGTACCCTTCTGACTGCCTGCCTGCCCTTTGGCCTTCACTTTGATGA  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTACCCTTCTGACTGCCTGCCTGCCCTTTGGCCTTCACTTTGATGA  598

seq1  GTAAACTTCTGGGTTTCTGTGGTGACTTGTAGTTCCAGTGGGTCTCAGGT  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTTCTGGGTTTCTGTGGTGACTTGTAGTTCCAGTGGGTCTCAGGT  648

seq1  GAGGCACAGGCAATGAGCTGGGTCCCTTGCATGGTGTGCTTTGCCATCCT  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACAGGCAATGAGCTGGGTCCCTTGCATGGTGTGCTTTGCCATCCT  698

seq1  CATAGCTCAGCTGAACCCATCCCATCAGCTTGGTGGGGTGTCTTGGGGGT  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTCAGCTGAACCCATCCCATCAGCTTGGTGGGGTGTCTTGGGGGT  748

seq1  CAGAATTCTCAGGCCCTCTCTTGGGCAGCCAAGGCTTTGTTATTCCATCT  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCTCAGGCCCTCTCTTGGGCAGCCAAGGCTTTGTTATTCCATCT  798

seq1  TTGAGGAATAAGGAGGAGGAAGACGGAGTAAGAGGCTTTCAAAACTTATC  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAATAAGGAGGAGGAAGACGGAGTAAGAGGCTTTCAAAACTTATC  848

seq1  TGTGGAGGGAGTGACTCAGCTCCAGAGGTTCAACACTCAGCTGCCTCATT  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGGAGTGACTCAGCTCCAGAGGTTCAACACTCAGCTGCCTCATT  898

seq1  TTCTCTGGGCTTTGAATCTTCTGACCTTTCTGCCCAGCCAGCTTTGGGGG  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGGCTTTGAATCTTCTGACCTTTCTGCCCAGCCAGCTTTGGGGG  948

seq1  TTTGGCTCCAGGGTAGTCTGCGCCTCTGCAGTCAGTCGTTACTCACCCAC  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTCCAGGGTAGTCTGCGCCTCTGCAGTCAGTCGTTACTCACCCAC  998

seq1  TTAAGTGTTTGCTTGTTTTACCCCCTCACTGCCAGTTCAGATCAGTCTAG  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTTTGCTTGTTTTACCCCCTCACTGCCAGTTCAGATCAGTCTAG  1048

seq1  CAGTACTTGGGAAATCCCATCAGAAGCACATACAAAGGGAGGGAGCAGGG  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTTGGGAAATCCCATCAGAAGCACATACAAAGGGAGGGAGCAGGG  1098

seq1  CTCCCTGGCTCTGTAACCATAGATACAGAGGAATTC  1113
      ||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGCTCTGTAACCATAGATACAGAGGAATTC  1134