BAC Information

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BAC

Clone NameB6Ng01-194F01
Chromosome9 (Build37)
Map Location 91,749,247 - 91,750,439
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434428, LOC621576, Zic1, Zic4
Downstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194F01.bB6Ng01-194F01.g
ACCGA017045GA017046
length1901,158
definitionB6Ng01-194F01.b B6Ng01-194F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcagtcctacttagaaggaggaacaaaataagatagagtaagg
gagggatatgaaaggaagagacgaatgagaggaaaaaagtggggatggat
catgtgtgggtggagatgggggaaagtacagagggtcaggaattgacctg
aggtgagtatcagtgtgggatgcggaacttctggcttatt
gaattcataccagggatcaaattgttctataaactctagtgattttgttt
aaatatctaccagaacatgtttgcacaaaggcataatagcactgatgaaa
gaagaagccattgagaaaaattaaggcatttttctagaaagacttgcaaa
atctgatacgagtcactttttttccatctgttactttttgatacgagtta
ccttttttcatctgttactttttccatctctttcttttaataagtatatc
agagacgtcttagaatgattatgaatgaaaaaggaagttcttcaaaatca
ctgtaagacattttttaaaggtagaggaagtttgtatagcagccagtact
gtttttataatgttagcaattacctatctctatggaattattgctaaagc
aggaatccatcccagtataattacatcctcttggagatatcataggtaaa
cttctgaataaatttttgattaacattcacaatactgagcacaaggtttg
aataagtttacattggactaaagatgactagaaatggaagtctactttca
ggattcataaaagtttgtctctcttatcaatatcataaaagtttgtctct
cttatcaatatgatagctaaattaataatgattgtcttacctatgtgatt
gacaataaacaagtaaacaattcctatagccctgagtggcagactcaaat
ggacagtatagtccaaggtcttccctggtctcaccttatgcttggtatat
ggcactataaaacagagaagaaagcttttgctttctcttgtgtaagccac
tgataacatctcatttgaatgagatgaatctccacatcaaagctatccat
ttgttgccttgtctgcctagttgtctgtgtttttgttcatttgtttagtt
gacattttgtctttcttaaaaaaaaaatcacaggacaccctgtttccaag
tcctcagtgaaatagatagtattagtgtttttaggaggttagcactaatt
tacatcttctgaaactctaaactgtatgtgtcatttctgtcctctctttt
gcttattctccttagattttaatatcaatattattatttaattcaaagtt
acccattctgatccaatcagagtctgactccctatggcttgaaggatgtt
cccacacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_91749247_91750439
seq2: B6Ng01-194F01.g_64_1221 (reverse)

seq1  GGTGGGGGAACATCCTCTCAGAGACAAAGGGGAGAAGGTGAAGAATTCTT  50
      |||| ||||||||||| ||| || || ||||    ||       | ||| 
seq2  GGTGTGGGAACATCCT-TCA-AGCCATAGGGAGTCAG-------ACTCT-  40

seq1  AGATTGGGGACCAGGAAATGGGGTAACATTTGGAATGTAAATAAATAAAA  100
       ||||  ||| |||  ||| ||||||| ||||      || |||||  ||
seq2  -GATT--GGATCAG--AAT-GGGTAAC-TTTG------AATTAAAT--AA  75

seq1  TAAT-TTAATAATAAAAATACTAAAAGGAAGAATAAAACAAAAAGAGAGA  149
      |||| || ||| |||||   ||||   | |||||||   ||| |||| ||
seq2  TAATATTGATATTAAAA--TCTAA---GGAGAATAAGCAAAAGAGAG-GA  119

seq1  CAGAAAATGACACATACAGTTTAGAGGTTTCAGAAGATTGTAAATTAGTT  199
      ||| ||||||||||||||||||||| ||||||||||| |||||||||| |
seq2  CAG-AAATGACACATACAGTTTAGA-GTTTCAGAAGA-TGTAAATTAG-T  165

seq1  GCTAACCCTCCCTAAAACACTAATACTATCTATTTCACTGAGGACTTGGA  249
      ||||| |||||  |||||||||||||||||||||||||||||||||||||
seq2  GCTAA-CCTCCTAAAAACACTAATACTATCTATTTCACTGAGGACTTGGA  214

seq1  AACAGGTTGTCCTGTGATTTTTTTTTTAAGAAAGACAAAATGTCAACTAA  299
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGTGTCCTGTGATTTTTTTTTTAAGAAAGACAAAATGTCAACTAA  264

seq1  ACAAATGAACAAAAACACAGACAACTAGGCAGACAAGGCAACAAATGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGAACAAAAACACAGACAACTAGGCAGACAAGGCAACAAATGGAT  314

seq1  AGCTTTGATGTGGAGATTCATCTCATTCAAATGAGATGTTATCAGTGGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGATGTGGAGATTCATCTCATTCAAATGAGATGTTATCAGTGGCT  364

seq1  TACACAAGAGAAAGCAAAAGCTTTCTTCTCTGTTTTATAGTGCCATATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAGAGAAAGCAAAAGCTTTCTTCTCTGTTTTATAGTGCCATATAC  414

seq1  CAAGCATAAGGTGAGACCAGGGAAGACCTTGGACTATACTGTCCATTTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATAAGGTGAGACCAGGGAAGACCTTGGACTATACTGTCCATTTGA  464

seq1  GTCTGCCACTCAGGGCTATAGGAATTGTTTACTTGTTTATTGTCAATCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCACTCAGGGCTATAGGAATTGTTTACTTGTTTATTGTCAATCAC  514

seq1  ATAGGTAAGACAATCATTATTAATTTAGCTATCATATTGATAAGAGAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTAAGACAATCATTATTAATTTAGCTATCATATTGATAAGAGAGAC  564

seq1  AAACTTTTATGATATTGATAAGAGAGACAAACTTTTATGAATCCTGAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTATGATATTGATAAGAGAGACAAACTTTTATGAATCCTGAAAG  614

seq1  TAGACTTCCATTTCTAGTCATCTTTAGTCCAATGTAAACTTATTCAAACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTCCATTTCTAGTCATCTTTAGTCCAATGTAAACTTATTCAAACC  664

seq1  TTGTGCTCAGTATTGTGAATGTTAATCAAAAATTTATTCAGAAGTTTACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTCAGTATTGTGAATGTTAATCAAAAATTTATTCAGAAGTTTACC  714

seq1  TATGATATCTCCAAGAGGATGTAATTATACTGGGATGGATTCCTGCTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATCTCCAAGAGGATGTAATTATACTGGGATGGATTCCTGCTTTA  764

seq1  GCAATAATTCCATAGAGATAGGTAATTGCTAACATTATAAAAACAGTACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAATTCCATAGAGATAGGTAATTGCTAACATTATAAAAACAGTACT  814

seq1  GGCTGCTATACAAACTTCCTCTACCTTTAAAAAATGTCTTACAGTGATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTATACAAACTTCCTCTACCTTTAAAAAATGTCTTACAGTGATTT  864

seq1  TGAAGAACTTCCTTTTTCATTCATAATCATTCTAAGACGTCTCTGATATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACTTCCTTTTTCATTCATAATCATTCTAAGACGTCTCTGATATA  914

seq1  CTTATTAAAAGAAAGAGATGGAAAAAGTAACAGATGAAAAAAGGTAACTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAAAAGAAAGAGATGGAAAAAGTAACAGATGAAAAAAGGTAACTC  964

seq1  GTATCAAAAAGTAACAGATGGAAAAAAAGTGACTCGTATCAGATTTTGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAAAGTAACAGATGGAAAAAAAGTGACTCGTATCAGATTTTGCA  1014

seq1  AGTCTTTCTAGAAAAATGCCTTAATTTTTCTCAATGGCTTCTTCTTTCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTCTAGAAAAATGCCTTAATTTTTCTCAATGGCTTCTTCTTTCAT  1064

seq1  CAGTGCTATTATGCCTTTGTGCAAACATGTTCTGGTAGATATTTAAACAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTATTATGCCTTTGTGCAAACATGTTCTGGTAGATATTTAAACAA  1114

seq1  AATCACTAGAGTTTATAGAACAATTTGATCCCTGGTATGAATTC  1193
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTAGAGTTTATAGAACAATTTGATCCCTGGTATGAATTC  1158