BAC Information

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BAC

Clone NameB6Ng01-196E22
Chromosome9 (Build37)
Map Location 110,458,625 - 110,515,730
singlet/doubletdoublet
Overlap geneSetd2
Upstream geneFbxw15, EG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1, Rn4.5s-ps2, Cspg5, Tmem103, Scap, Ptpn23, Ngp, Klhl18, Kif9
Downstream geneNradd, Nbeal2, Ccdc12, Pthr1, Myl3, 9430025E04Rik, LOC665549, Tessp2, 1700036D21Rik, Tessp3, BC107230, 1700112C13Rik, Tsp50, Tmie, Als2cl, Gm590, Tdgf1, Lrrc2, Rtp3, ENSMUSG00000057802, Ltf, Ccrl2, LOC100039275, Lrrfip2, Mlh1, Epm2aip1, Lba1, Dclk3, LOC620615, Stac
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196E22.bB6Ng01-196E22.g
ACCGA018483GA018484
length7801,073
definitionB6Ng01-196E22.b B6Ng01-196E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,514,951 - 110,515,730)(110,458,625 - 110,459,693)
sequence
gaattctctgactatgagcatggtggcttaaacctgtactaccagcactt
gagaagctgaggcaagaggatagctccaagtaacttcaagatcagcctag
gctacacagtaagctttagaacaaccgggatgacagagtgagaccacctt
ttaagacaaattatatttaaggcaagaagcaagcatatccccagatattc
tcttatagttctcagaaatgaataaaaatacaaggaatccacaaaatgcc
ttcaaatgtgatgacatcaccaggaccttaagggttctgctccctctaaa
ctaccggttctcagtctgtgggttttgacccctgagagctgtccaacaaa
ccttttcacaagagtcaacacagatgatttatacagaacattatgatcca
taatagtaacaaaatgacagttatgaagtagcaatgaaaataattttatg
attgggaatcaccacaacacaaggaactgtgttaaagggttgcagcatta
ggaaggttgaggaccactgccctaaagaatggattttcagaaaggtaagt
taatctggaaccaggtttgtagctcagttggtagaggacttgcccagcat
gcaggaagccccgagtttgatccccagcactgtataaacttggcatggtg
atgcatgcctataaccccagcacttgagaggtagagacaagaggatcagt
aggttcaaggtcatccttggccacctagcaagttcaaggtaactggtcta
cacaggggatggggacagggggatgggggg
gaattctagggaatgcttttaagtggtaacacggaggaagggcattggtt
agccacagctgaactgtgtgtatagctgaggttgttgtcacagaacacat
tctgttgaagctgctacagttctttatggtatttaaagaattatctttta
cccatttctcatttcagttcctctcgatgtccaaatggagattactgttc
aaacagacggtttcagagaaaacagcatgcagatgtagaagtcatactta
cagaaaagaaaggctggggcttaagggctgctaaggatcttccttcgtaa
gtttggtttctatccctttcatgtcaggtttctgtgttgttggatttggt
taggcatttggttaaatgatttatttcagtgatgtttaataatgctcatt
gtgtagaatgactgcttggcaactagtttgttaaattgatttttagaaaa
tgaagaaaaagttccattttgggtttttggaagttttttttattttgttt
tttctttttgtttttttttttttaaacagtctttaagttatgatgaatga
tttttgaggcctttcatttggctgaatcttcgagtctacactgttaatcc
ctgagtattgctatattctataaatttccactccttgatcttttagtggt
tggttagattctggtatttaaacttgtttcaattaaaagtgtgtcctgag
tgcactgtcgttagactgttgggtatattacagcccctttgagaggccaa
gtgttcattctgctgggctctgacttggggcagatgaccgaatttcttta
aactctgtctgtctttcataaaactcatgttacacaggcttcagtgatca
gggaggagagtttggtttttggtaagagagggaaagaatccaatctcatg
tattttagcatttactgaaaattaataagatagtctgtgtaagacttggg
aattttgtcattatgccattactcgcaactggatacaaactcttgctcag
aaaagaaacatcttaggattattttctactttatagggaagggggttaac
tctcatggtatgtctgcaccact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_110514951_110515730
seq2: B6Ng01-196E22.b_44_823 (reverse)

seq1  CCCCCCATCCCCCTGTCCCCATCCCCTGTGTAGACCAGTTACCTTGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCATCCCCCTGTCCCCATCCCCTGTGTAGACCAGTTACCTTGAACT  50

seq1  TGCTAGGTGGCCAAGGATGACCTTGAACCTACTGATCCTCTTGTCTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGTGGCCAAGGATGACCTTGAACCTACTGATCCTCTTGTCTCTAC  100

seq1  CTCTCAAGTGCTGGGGTTATAGGCATGCATCACCATGCCAAGTTTATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGTGCTGGGGTTATAGGCATGCATCACCATGCCAAGTTTATACA  150

seq1  GTGCTGGGGATCAAACTCGGGGCTTCCTGCATGCTGGGCAAGTCCTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGGATCAAACTCGGGGCTTCCTGCATGCTGGGCAAGTCCTCTAC  200

seq1  CAACTGAGCTACAAACCTGGTTCCAGATTAACTTACCTTTCTGAAAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAGCTACAAACCTGGTTCCAGATTAACTTACCTTTCTGAAAATCC  250

seq1  ATTCTTTAGGGCAGTGGTCCTCAACCTTCCTAATGCTGCAACCCTTTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAGGGCAGTGGTCCTCAACCTTCCTAATGCTGCAACCCTTTAAC  300

seq1  ACAGTTCCTTGTGTTGTGGTGATTCCCAATCATAAAATTATTTTCATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCCTTGTGTTGTGGTGATTCCCAATCATAAAATTATTTTCATTGC  350

seq1  TACTTCATAACTGTCATTTTGTTACTATTATGGATCATAATGTTCTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATAACTGTCATTTTGTTACTATTATGGATCATAATGTTCTGTAT  400

seq1  AAATCATCTGTGTTGACTCTTGTGAAAAGGTTTGTTGGACAGCTCTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCTGTGTTGACTCTTGTGAAAAGGTTTGTTGGACAGCTCTCAGG  450

seq1  GGTCAAAACCCACAGACTGAGAACCGGTAGTTTAGAGGGAGCAGAACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAACCCACAGACTGAGAACCGGTAGTTTAGAGGGAGCAGAACCCT  500

seq1  TAAGGTCCTGGTGATGTCATCACATTTGAAGGCATTTTGTGGATTCCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCCTGGTGATGTCATCACATTTGAAGGCATTTTGTGGATTCCTTG  550

seq1  TATTTTTATTCATTTCTGAGAACTATAAGAGAATATCTGGGGATATGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATTCATTTCTGAGAACTATAAGAGAATATCTGGGGATATGCTT  600

seq1  GCTTCTTGCCTTAAATATAATTTGTCTTAAAAGGTGGTCTCACTCTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTGCCTTAAATATAATTTGTCTTAAAAGGTGGTCTCACTCTGTCA  650

seq1  TCCCGGTTGTTCTAAAGCTTACTGTGTAGCCTAGGCTGATCTTGAAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGTTGTTCTAAAGCTTACTGTGTAGCCTAGGCTGATCTTGAAGTTA  700

seq1  CTTGGAGCTATCCTCTTGCCTCAGCTTCTCAAGTGCTGGTAGTACAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGCTATCCTCTTGCCTCAGCTTCTCAAGTGCTGGTAGTACAGGTT  750

seq1  TAAGCCACCATGCTCATAGTCAGAGAATTC  780
      ||||||||||||||||||||||||||||||
seq2  TAAGCCACCATGCTCATAGTCAGAGAATTC  780

seq1: chr9_110458625_110459693
seq2: B6Ng01-196E22.g_64_1136

seq1  GAATTCTAGGGAATGCTTTTAAGTGGTAACACGGAGGAAGGGCATTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGGAATGCTTTTAAGTGGTAACACGGAGGAAGGGCATTGGTT  50

seq1  AGCCACAGCTGAACTGTGTGTATAGCTGAGGTTGTTGTCACAGAACACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAGCTGAACTGTGTGTATAGCTGAGGTTGTTGTCACAGAACACAT  100

seq1  TCTGTTGAAGCTGCTACAGTTCTTTATGGTATTTAAAGAATTATCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGAAGCTGCTACAGTTCTTTATGGTATTTAAAGAATTATCTTTTA  150

seq1  CCCATTTCTCATTTCAGTTCCTCTCGATGTCCAAATGGAGATTACTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTCTCATTTCAGTTCCTCTCGATGTCCAAATGGAGATTACTGTTC  200

seq1  AAACAGACGGTTTCAGAGAAAACAGCATGCAGATGTAGAAGTCATACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACGGTTTCAGAGAAAACAGCATGCAGATGTAGAAGTCATACTTA  250

seq1  CAGAAAAGAAAGGCTGGGGCTTAAGGGCTGCTAAGGATCTTCCTTCGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGAAAGGCTGGGGCTTAAGGGCTGCTAAGGATCTTCCTTCGTAA  300

seq1  GTTTGGTTTCTATCCCTTTCATGTCAGGTTTCTGTGTTGTTGGATTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTCTATCCCTTTCATGTCAGGTTTCTGTGTTGTTGGATTTGGT  350

seq1  TAGGCATTTGGTTAAATGATTTATTTCAGTGATGTTTAATAATGCTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATTTGGTTAAATGATTTATTTCAGTGATGTTTAATAATGCTCATT  400

seq1  GTGTAGAATGACTGCTTGGCAACTAGTTTGTTAAATTGATTTTTAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAATGACTGCTTGGCAACTAGTTTGTTAAATTGATTTTTAGAAAA  450

seq1  TGAAGAAAAAGTTCCATTTTGGGTTTTTGGAAGTTTTTTTTATTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAAAGTTCCATTTTGGGTTTTTGGAAGTTTTTTTTATTTTGTTT  500

seq1  TTTCTTTTTGTTTTTTTTTTTTTAAACAGTCTTTAAGTTATGATGAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGTTTTTTTTTTTTTAAACAGTCTTTAAGTTATGATGAATGA  550

seq1  TTTTTGAGGCCTTTCATTTGGCTGAATCTTCGAGTCTACACTGTTAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGGCCTTTCATTTGGCTGAATCTTCGAGTCTACACTGTTAATCC  600

seq1  CTGAGTATTGCTATATTCTATAAATTTCCACTCCTTGATCTTTTAGTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTATTGCTATATTCTATAAATTTCCACTCCTTGATCTTTTAGTGGT  650

seq1  TGGTTAGATTCTGGTATTTAAACTTGTTTCAATTAAAAGTGTGTCCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGATTCTGGTATTTAAACTTGTTTCAATTAAAAGTGTGTCCTGAG  700

seq1  TGCACTGTCGTTAGACTGTTGGGTATATTACAGCCCCTTTGAGAGGCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGTCGTTAGACTGTTGGGTATATTACAGCCCCTTTGAGAGGCCAA  750

seq1  GTGTTCATTCTGCTGGGCTCTGACTTGGGGCAGATGACCGAATTTCTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATTCTGCTGGGCTCTGACTTGGGGCAGATGACCGAATTTCTTTA  800

seq1  AACTCTGTCTGTCTTTCATAAAACTCATGTTACACA-GCTTCAGTGATCA  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AACTCTGTCTGTCTTTCATAAAACTCATGTTACACAGGCTTCAGTGATCA  850

seq1  GGGAGGAGAGTTTGGTTTTTGGTAAGAGAGGGAAAG-ATCCAATCTCATG  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGAGGAGAGTTTGGTTTTTGGTAAGAGAGGGAAAGAATCCAATCTCATG  900

seq1  TATTTTAGCATTTACTG-AAATTTATAAGATAGTCTGTGTAAGACTT-GG  946
      ||||||||||||||||| ||||| ||||||||||||||||||||||| ||
seq2  TATTTTAGCATTTACTGAAAATTAATAAGATAGTCTGTGTAAGACTTGGG  950

seq1  AATTTTGTCATTATG-CATTACTTGCAAACTTGATAC-AACTCTTTGCTC  994
      ||||||||||||||| ||||||| || |||| ||||| ||||| ||||||
seq2  AATTTTGTCATTATGCCATTACTCGC-AACTGGATACAAACTC-TTGCTC  998

seq1  AG-AAAGAAACATCTTAGGATTTATTTTTTACTTTATATGTATAGGTGTT  1043
      || ||||||||||||||||| ||||||| ||||||||| | |  || |||
seq2  AGAAAAGAAACATCTTAGGA-TTATTTTCTACTTTATAGGGAAGGGGGTT  1047

seq1  TAATCTCAATGTATGTCTGCACCACT  1069
       | |||||  ||||||||||||||||
seq2  AACTCTCATGGTATGTCTGCACCACT  1073