BAC Information

Click to search

BAC

Clone NameB6Ng01-197L01
Chromosome9 (Build37)
Map Location 38,473,897 - 38,624,531
singlet/doubletdoublet
Overlap geneOlfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922
Upstream genePanx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917
Downstream geneOlfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197L01.bB6Ng01-197L01.g
ACCGA019488GA019489
length1,1241,075
definitionB6Ng01-197L01.b B6Ng01-197L01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,623,406 - 38,624,531)(38,473,897 - 38,474,968)
sequence
gaattcatctttgcaacaatgacactttagattcgaagtttatataaaat
tatttatctcagaggggattctttacatgatgataatattttaacacata
attaactggtacttatgcctgaaaagatgctgcaattacccataaaacac
aaataggaaacactggtgagataataagatataatttcagaaaaacaggc
agatatggtgttttattactgtaattctttctgtcaggaggctgaggcag
gaggaacaccatgagtataaaaaggaaaggaaaatggaaaaataaaaggg
gaaaagaataaaagaaatttcaaaaccaatattacctagtattaacttac
gttttctaataccctgtcaggtaatataatattctcactttccaaagttt
cagaccaggtcagctccaaaaccagtgttttgtatttgaccattcctttg
tcttcatatttcaagaggagctggtattctctttagtaactaatattatc
cccaactcaggaggatattttcatcctcaaggtttttctcagggcaatct
tgacctccttgttcctgaagctgtagatcaaaggattgagcatgggtacc
acaatggtgtagaatacagtggacactttcccttgatccatggacaaaac
agaggaaggatggaggtacataaatgcccctgacccaaagaaaacagaaa
ccacaataatatgtgagctacaggtgctgaaagccttagatctgccttca
gtggatcggatgtgaaggatgctagaaagaatgaatgtgtaagaaacaac
gatggtgatgctgggcacacctacatcaaaacctacaacaatgaatacta
caagctcattaatgtaagtgctactgcaggaaagctctagcagaggaagg
atgtcacacatgtaatgattgacagtgttgtccttacagaaggtcagcct
catcatgcaacctgtgtgggccatgcaccaataatgctcccacatataca
atgagagtcaacagagagcatacctgagggacatgggtaacagtgtacaa
cagggcttacagatggccacatagcgatcaatatgcattcactgtcaaca
catagccatctgcactgacaaaga
gaattctgactacataggataaccttatcagagacgttgcaactccattt
tcacccaccacctcttaaaatgcttttgtcccactgtaggctgtcttctg
aagaatattttactttagcctcattttgcacagaaaaggaaataagcttg
ctgatttttttcatacattaagaaatactttggattgaggagttggcaga
ttgggaggatctcaggggagttggggaagagaaaattataatcataatat
gttaaatgaaaaaatatattttcaacaagataaaaataaaagaaatatgc
atttaaaaagagaaaaagcaagatgtctggagagagagagagagagagag
agagagagagagagagagagagagagagagaatgttattatacctgtaat
tcagaaagtcacaatttgcagtccaaacatttgaggtctctcacctttct
atttatccatatatgtctggataaatatttcagattcagatactcagatc
cttcatttcaaggaagaaagagatgcacaaaaccgagttttcctggacca
gtttttgaattatacaacattatttctgattgaggcttctaattttttct
ggaataagagaagaggtgcctttaactctgagatgcatgtttttataagc
agggttcagagattgtctaggcttttccttagaggagagcatttagattg
gagaagtagatgaggaaattctattgtaacctgggtcttgatccttgttt
cctgagggacccacaattatgctcatactttccaattactctagagaact
tgcatccccagtgctggtagatagactcttgcctccccagttatcctgag
ctcagaaagggaactctgtgtttatggttcttcctctctttgtttcctca
tattaaaatgacttacccaacaagtcttgcttcctgacttacttaattct
gttcagtgaattttagcatagtttcagaaagtcatcgtcagtgctctgct
accagaaatattaatagatgttattttaaaatattttgacacattgacaa
agaaatgggaacattctcaaaggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38623406_38624531
seq2: B6Ng01-197L01.b_46_1169 (reverse)

seq1  TCTTTGTCAGTGCAGAATGCTATGTGTTGACAGTGATGGCATA-TGATCG  49
      ||||||||||||||||  ||||||||||||||||||  ||||| ||||||
seq2  TCTTTGTCAGTGCAGATGGCTATGTGTTGACAGTGAATGCATATTGATCG  50

seq1  CTATGTGGCCATCTGTAAGCCCCTGTTGTACACTGTTA-CCATGTCCCCT  98
      ||||||||||||||||||| |||||||||||||||||| |||||| ||||
seq2  CTATGTGGCCATCTGTAAG-CCCTGTTGTACACTGTTACCCATGT-CCCT  98

seq1  CAGGTATGCTCTCTGTTGACTCTCATTGTATATGTGGGAGCATTTATTGG  148
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGGTATGCTCTCTGTTGACTCTCATTGTATATGTGGGAGCA-TTATTGG  147

seq1  TGCATGGGCCCACACAGGTTGCATGATGAGGCTGACCTTCTGTAAGGACA  198
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAT-GGCCCACACAGGTTGCATGATGAGGCTGACCTTCTGTAAGGACA  196

seq1  ACACTGTCAATCATTACATGTGTGACATCCTTCCTCTGCTAGAGCTTTCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTCAATCATTACATGTGTGACATCCTTCCTCTGCTAGAGCTTTCC  246

seq1  TGCAGTAGCACTTACATTAATGAGCTTGTAGTATTCATTGTTGTAGGTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAGCACTTACATTAATGAGCTTGTAGTATTCATTGTTGTAGGTTT  296

seq1  TGATGTAGGTGTGCCCAGCATCACCATCGTTGTTTCTTACACATTCATTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAGGTGTGCCCAGCATCACCATCGTTGTTTCTTACACATTCATTC  346

seq1  TTTCTAGCATCCTTCACATCCGATCCACTGAAGGCAGATCTAAGGCTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGCATCCTTCACATCCGATCCACTGAAGGCAGATCTAAGGCTTTC  396

seq1  AGCACCTGTAGCTCACATATTATTGTGGTTTCTGTTTTCTTTGGGTCAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGTAGCTCACATATTATTGTGGTTTCTGTTTTCTTTGGGTCAGG  446

seq1  GGCATTTATGTACCTCCATCCTTCCTCTGTTTTGTCCATGGATCAAGGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTATGTACCTCCATCCTTCCTCTGTTTTGTCCATGGATCAAGGGA  496

seq1  AAGTGTCCACTGTATTCTACACCATTGTGGTACCCATGCTCAATCCTTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCACTGTATTCTACACCATTGTGGTACCCATGCTCAATCCTTTG  546

seq1  ATCTACAGCTTCAGGAACAAGGAGGTCAAGATTGCCCTGAGAAAAACCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAGCTTCAGGAACAAGGAGGTCAAGATTGCCCTGAGAAAAACCTT  596

seq1  GAGGATGAAAATATCCTCCTGAGTTGGGGATAATATTAGTTACTAAAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGAAAATATCCTCCTGAGTTGGGGATAATATTAGTTACTAAAGAG  646

seq1  AATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAGCTCCTCTTGAAATATGAAGACAAAGGAATGGTCAAATACAAA  696

seq1  ACACTGGTTTTGGAGCTGACCTGGTCTGAAACTTTGGAAAGTGAGAATAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGTTTTGGAGCTGACCTGGTCTGAAACTTTGGAAAGTGAGAATAT  746

seq1  TATATTACCTGACAGGGTATTAGAAAACGTAAGTTAATACTAGGTAATAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTACCTGACAGGGTATTAGAAAACGTAAGTTAATACTAGGTAATAT  796

seq1  TGGTTTTGAAATTTCTTTTATTCTTTTCCCCTTTTATTTTTCCATTTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTGAAATTTCTTTTATTCTTTTCCCCTTTTATTTTTCCATTTTCC  846

seq1  TTTCCTTTTTATACTCATGGTGTTCCTCCTGCCTCAGCCTCCTGACAGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTTATACTCATGGTGTTCCTCCTGCCTCAGCCTCCTGACAGAA  896

seq1  AGAATTACAGTAATAAAACACCATATCTGCCTGTTTTTCTGAAATTATAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTACAGTAATAAAACACCATATCTGCCTGTTTTTCTGAAATTATAT  946

seq1  CTTATTATCTCACCAGTGTTTCCTATTTGTGTTTTATGGGTAATTGCAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATCTCACCAGTGTTTCCTATTTGTGTTTTATGGGTAATTGCAGC  996

seq1  ATCTTTTCAGGCATAAGTACCAGTTAATTATGTGTTAAAATATTATCATC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCAGGCATAAGTACCAGTTAATTATGTGTTAAAATATTATCATC  1046

seq1  ATGTAAAGAATCCCCTCTGAGATAAATAATTTTATATAAACTTCGAATCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGAATCCCCTCTGAGATAAATAATTTTATATAAACTTCGAATCT  1096

seq1  AAAGTGTCATTGTTGCAAAGATGAATTC  1126
      ||||||||||||||||||||||||||||
seq2  AAAGTGTCATTGTTGCAAAGATGAATTC  1124

seq1: chr9_38473897_38474968
seq2: B6Ng01-197L01.g_64_1138

seq1  GAATTCTGACTACATAGGATAACCTTATCAGAGACGTTGCAACTCCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTACATAGGATAACCTTATCAGAGACGTTGCAACTCCATTT  50

seq1  TCACCCACCACCTCTTAAAATGCTTTTGTCCCACTGTAGGCTGTCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCACCACCTCTTAAAATGCTTTTGTCCCACTGTAGGCTGTCTTCTG  100

seq1  AAGAATATTTTACTTTAGCCTCATTTTGCACAGAAAAGGAAATAAGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATTTTACTTTAGCCTCATTTTGCACAGAAAAGGAAATAAGCTTG  150

seq1  CTGATTTTTTTCATACATTAAGAAATACTTTGGATTGAGGAGTTGGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTTTTCATACATTAAGAAATACTTTGGATTGAGGAGTTGGCAGA  200

seq1  TTGGGAGGATCTCAGGGGAGTTGGGGAAGAGAAAATTATAATCATAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGATCTCAGGGGAGTTGGGGAAGAGAAAATTATAATCATAATAT  250

seq1  GTTAAATGAAAAAATATATTTTCAACAAGATAAAAATAAAAGAAATATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATGAAAAAATATATTTTCAACAAGATAAAAATAAAAGAAATATGC  300

seq1  ATTTAAAAAGAGAAAAAGCAAGATGTCTGGAGAGAGAGAGAGAGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAGAGAAAAAGCAAGATGTCTGGAGAGAGAGAGAGAGAGAGAG  350

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTTATTATACCTGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTTATTATACCTGTAAT  400

seq1  TCAGAAAGTCACAATTTGCAGTCCAAACATTTGAGGTCTCTCACCTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGTCACAATTTGCAGTCCAAACATTTGAGGTCTCTCACCTTTCT  450

seq1  ATTTATCCATATATGTCTGGATAAATATTTCAGATTCAGATACTCAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCATATATGTCTGGATAAATATTTCAGATTCAGATACTCAGATC  500

seq1  CTTCATTTCAAGGAAGAAAGAGATGCACAAAACCGAGTTTTCCTGGACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCAAGGAAGAAAGAGATGCACAAAACCGAGTTTTCCTGGACCA  550

seq1  GTTTTTGAATTATACAACATTATTTCTGATTGAGGCTTCTAATTTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAATTATACAACATTATTTCTGATTGAGGCTTCTAATTTTTTCT  600

seq1  GGAATAAGAGAAGAGGTGCCTTTAACTCTGAGATGCATGTTTTTATAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAGAGAAGAGGTGCCTTTAACTCTGAGATGCATGTTTTTATAAGC  650

seq1  AGGGTTCAGAGATTGTCTAGGCTTTTCCTTAGAGGAGAGCATTTAGATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCAGAGATTGTCTAGGCTTTTCCTTAGAGGAGAGCATTTAGATTG  700

seq1  GAGAAGTAGATGAGGAAATTCTATTGTAACCTGGGTCTTGATCCTTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTAGATGAGGAAATTCTATTGTAACCTGGGTCTTGATCCTTGTTT  750

seq1  CCTGAGGGACCCACAATTATGCTCATACTTTCCAATTACTCTAGAGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGGACCCACAATTATGCTCATACTTTCCAATTACTCTAGAGAACT  800

seq1  TGCATCCCCAGTGCTGGTAGATAGACTCTTGCCTCCCCAGTTATCCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCCAGTGCTGGTAGATAGACTCTTGCCTCCCCAGTTATCCTGAG  850

seq1  CTCAG-AAGGGAACTCTGTGTTTATGGTTCTTCCTCTCTTTGTTTCCTCA  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAAGGGAACTCTGTGTTTATGGTTCTTCCTCTCTTTGTTTCCTCA  900

seq1  TATT-AAATGACTTACCC-ACAAGTCTTGC-TCCTGACTTACTAAATTCT  946
      |||| ||||||||||||| ||||||||||| |||||||||||| ||||||
seq2  TATTAAAATGACTTACCCAACAAGTCTTGCTTCCTGACTTACTTAATTCT  950

seq1  G-TCAGTGAATTTTAGCATTAGTTTCAGAAAGTCATCGTCAGTGCTCTGC  995
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTTCAGTGAATTTTAGCA-TAGTTTCAGAAAGTCATCGTCAGTGCTCTGC  999

seq1  TACCAGAAATATT-ATAGATGTTATTTTAAAAATATTTTGAACACATTGA  1044
      ||||||||||||| |||||||||||||| ||||||||||| |||||||||
seq2  TACCAGAAATATTAATAGATGTTATTTT-AAAATATTTTG-ACACATTGA  1047

seq1  CAAAAGAAAGGGGAACA-TCTCAGAGGAC  1072
      | ||||||| ||||||| ||||| |||||
seq2  C-AAAGAAATGGGAACATTCTCAAAGGAC  1075