BAC Information

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BAC

Clone NameB6Ng01-198I18
Chromosome9 (Build37)
Map Location 85,575,248 - 85,576,324
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666672, BC023892
Downstream geneIbtk, 4933431K14Rik, EG434426, 9330154J02Rik, Tpbg, 2610018I03Rik, Pgm3, Rwdd2, Mod1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198I18.bB6Ng01-198I18.g
ACCGA020114GA020115
length1,0881,144
definitionB6Ng01-198I18.b B6Ng01-198I18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggactatttctccgtctcagaagtgacagttctctggctgtg
taaataagtggtagcaaagactggaaagcatcacctacaacatgagagat
ttaggctgagggggagctaggtaacttctggtattcttctattacaacag
aatcaaagaacatccgtgtacacgttgtgtgtgagtataaacttttcttt
ctctaggaaaaatactcaaaagcacctgctggtcacacgaaacacagacc
tttaagaggcagaagtatgactgaaatggaagtttctggtaagcatcctg
tgacccagactcacgtggtgttttgctgaggcaagaccagtggacagaca
cctgatgtttgaagagatgagtataaacgggactcaatggacagtgactg
cacgcttgcatagctagctttgcaatggtttccttggtctcgagtctttg
ctgatcttcagtttgtttccttgttgctcttactgattcattcctgcgat
tcggaggaagcctggctgtttctgctggatcatgccactgctgctgattt
gtgtttggtatcctgacactactataccggactgctggtattttgacaat
ggagattggaattgcctccaaagaactactctaaacaggtctacatcctc
ttaccctatttaccatctttcccccctcccccttcctttgggcagtggga
gagagggaggaggggtgaagcatttgaaaacccttatttaaaataggttt
tttaaaaatctaagcctacatattactagtttgactagttttcataggct
tcctatgtaaccctaatgttagggtggtcctgaataatctcccagaggga
ttccccccaaaatatgcaataaaagggagaaattgcactggcattttaca
ggttccaaacaacctgaaaaaccagagatctttgttcagcatcataatct
gcaagattaacttaaccattggaagctttttcagattaaaatcagtaatt
tctctacatcagcagggtcactctaggtaccaaggccctacgctaacaca
gaacaatgctgccttaaaatgcctctgattggaagggc

gaattcaaatttctgaagacaggagctgctggagctgactctgagtagag
cctctgagtagacttataagggagagtgagctgttagcatttcagaaacc
tcctaaggaagaaaagccaactgccggtgatttcaccagcgaatgtctca
cttacagcatgattagttcccgatcccaaactttttcaaaaactagaaga
ggaagagaacatattgtgactcactcgctgatgccagtgtttctttaata
acagaacctgacaagacgccgcaagaaaaggaaaccacagagcgcgacca
cgtatgattgtagatgtaacatccttccgctaaattaaacctaatcaaac
ccagagacaagcaaaaatgactgtaatccatgactacgcaggattcacat
ctaggaatacaaggatgcttaaatgaaaagaaattgactgtggcaataca
aattaccaatggaaacaaaagaaaacaaacaaacagacagaaacaaaata
tggccataccatctgatgtggtagagtatttagcaatattcaccatccag
tctgataaaagaaaacaccctgcctaatataaatgaaagaagtccctatt
ctggttaagagtaccagaaaccaaactaataccacaaagagcacacctac
aatggcatgtaatggcaggagatatgatttcctgttatactgatgatgca
caggggagaatatgctgcagccttaaacattcataaaatgaagagttata
tttttaatttcttgtgatttttttatataataaaaagtcacattgtcaga
gaatagagttggtctgtctcctcctgcctagtctgactgcctcatgttct
tgcctgattgtcttatgtggcatgcccaatacaatcttgaaaaaaagcta
ggtaagagcagacatccttgttttggtatttactatcatgtgaaaccatt
ctgtctttagcattaatgtatcttagctgtggagttttacttctgctgct
attactgttttttatatctcaattatagattcattgacacactctcccag
ttgctatttgatatctgtgagttctccagtggaaaagaatatgctcatca
caggcttgtgctgaattatatatgacgaagcaattggaaaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_85575248_85576324
seq2: B6Ng01-198I18.b_45_1132

seq1  GAATTCAAGGACTATTTCTCCGTCTCAGAAGTGACAGTTCTCTGGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGACTATTTCTCCGTCTCAGAAGTGACAGTTCTCTGGCTGTG  50

seq1  TAAATAAGTGGTAGCAAAGACTGGAAAGCATCACCTACAACATGAGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGTGGTAGCAAAGACTGGAAAGCATCACCTACAACATGAGAGAT  100

seq1  TTAGGCTGAGGGGGAGCTAGGTAACTTCTGGTATTCTTCTATTACAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTGAGGGGGAGCTAGGTAACTTCTGGTATTCTTCTATTACAACAG  150

seq1  AATCAAAGAACATCCGTGTACACGTTGTGTGTGAGTATAAACTTTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGAACATCCGTGTACACGTTGTGTGTGAGTATAAACTTTTCTTT  200

seq1  CTCTAGGAAAAATACTCAAAAGCACCTGCTGGTCACACGAAACACAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGAAAAATACTCAAAAGCACCTGCTGGTCACACGAAACACAGACC  250

seq1  TTTAAGAGGCAGAAGTATGACTGAAATGGAAGTTTCTGGTAAGCATCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGGCAGAAGTATGACTGAAATGGAAGTTTCTGGTAAGCATCCTG  300

seq1  TGACCCAGACTCACGTGGTGTTTTGCTGAGGCAAGACCAGTGGACAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAGACTCACGTGGTGTTTTGCTGAGGCAAGACCAGTGGACAGACA  350

seq1  CCTGATGTTTGAAGAGATGAGTATAAACGGGACTCAATGGACAGTGACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGTTTGAAGAGATGAGTATAAACGGGACTCAATGGACAGTGACTG  400

seq1  CACGCTTGCATAGCTAGCTTTGCAATGGTTTCCTTGGTCTCGAGTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTTGCATAGCTAGCTTTGCAATGGTTTCCTTGGTCTCGAGTCTTTG  450

seq1  CTGATCTTCAGTTTGTTTCCTTGTTGCTCTTACTGATTCATTCCTGCGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTCAGTTTGTTTCCTTGTTGCTCTTACTGATTCATTCCTGCGAT  500

seq1  TCGGAGGAAGCCTGGCTGTTTCTGCTGGATCATGCCACTGCTGCTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGGAAGCCTGGCTGTTTCTGCTGGATCATGCCACTGCTGCTGATTT  550

seq1  GTGTTTGGTATCCTGACACTACTATACCGGACTGCTGGTATTTTGACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGGTATCCTGACACTACTATACCGGACTGCTGGTATTTTGACAAT  600

seq1  GGAGATTGGAATTGCCTCCAAAGAACTACTCTAAACAGGTCTACATCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTGGAATTGCCTCCAAAGAACTACTCTAAACAGGTCTACATCCTC  650

seq1  TTACCCTATTTACCATCTTTCCCCCCTCCCCCTTCCTTTGGGCAGTGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTATTTACCATCTTTCCCCCCTCCCCCTTCCTTTGGGCAGTGGGA  700

seq1  GAGAGGGAGGAGGGGTGAAGCATTTGAAAACCCTTATTTAAAATAGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAGGAGGGGTGAAGCATTTGAAAACCCTTATTTAAAATAGGTTT  750

seq1  TTTAAAAATCTAAGCCTACATATTACTAGTTTGACTAG-TTTCATAGGCT  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTAAAAATCTAAGCCTACATATTACTAGTTTGACTAGTTTTCATAGGCT  800

seq1  TCCTATGTAACCCTAATGTTAGGGTGGTCCTGAATAATCTCCCAGAGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTAACCCTAATGTTAGGGTGGTCCTGAATAATCTCCCAGAGGGA  850

seq1  TTCCCCCCAAAATATGCAAATAAAAGGGAGAAATTGCACTGGCATTTTAC  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCCCCCCAAAATATGC-AATAAAAGGGAGAAATTGCACTGGCATTTTAC  899

seq1  AGGTTCCAAACAAACCTGAAAA--CAGAGATCTTTGTTCAGCATCATAAT  947
      ||||||||||| ||||||||||  ||||||||||||||||||||||||||
seq2  AGGTTCCAAAC-AACCTGAAAAACCAGAGATCTTTGTTCAGCATCATAAT  948

seq1  CTGC-AGATTAACTTAACCAT--GGAGC-TTTTCAGA-TAAAATCAGTA-  991
      |||| ||||||||||||||||  | ||| |||||||| ||||||||||| 
seq2  CTGCAAGATTAACTTAACCATTGGAAGCTTTTTCAGATTAAAATCAGTAA  998

seq1  -TTCTTCACAATCAGCA-GGTCACTTTAAGGTAC--AAGCCCTACGCT-A  1036
       ||||  || ||||||| ||||||| | ||||||  | |||||||||| |
seq2  TTTCTCTAC-ATCAGCAGGGTCACTCT-AGGTACCAAGGCCCTACGCTAA  1046

seq1  CACAG-ACATGGCTGCTTTAAAATGCCTCTGAATTGAAGGGC  1077
      ||||| |||  ||||| ||||||||||||||| | |||||||
seq2  CACAGAACAATGCTGCCTTAAAATGCCTCTGATTGGAAGGGC  1088


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