MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-198M20
Chromosome	9 (Build37)
Map Location	52,764,568 - 52,865,389
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Fdx1, EG629557, Rdx, 9830163H01Rik, Zc3h12c, LOC100042876, AI593442, Gm1715
Downstream gene	Ddx10, Exph5, Kdelc2, 4930550C14Rik, Atm, Npat, Acat1, Cul5, Rab39, EG434404, LOC100038958, Slc35f2, Sln, LOC100038996, Elmod1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Fdx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14148 MGI:103224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629557 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629557 MGI:3646966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 90 ESTs, 25 Proteins

name	Rdx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19684 MGI:97887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9830163H01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414109 MGI:3041213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zc3h12c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244871 MGI:3026959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins

name	LOC100042876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	AI593442 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330941 MGI:2143099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gm1715 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382139 MGI:2686561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ddx10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77591 MGI:1924841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 145 ESTs, 7 Proteins

name	Exph5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320051 MGI:2443248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kdelc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68304 MGI:1923765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930550C14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75311 MGI:1922561
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11920 MGI:107202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244879 MGI:107605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110446 MGI:87870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cul5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75717 MGI:1922967
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab39 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270160 MGI:2442855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434404 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434404 MGI:3643565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 1756 ESTs, 7 Proteins

name	LOC100038958 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Slc35f2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72022 MGI:1919272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66402 MGI:1913652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038996 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 40 ESTs, 1 Protein

name	Elmod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270162 MGI:3583900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fdx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679764 GeneID:14148 MGI:103224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ferredoxin 1 transcript_id : NM_007996.1

name	EG629557 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386106 GeneID:629557 MGI:3646966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 90 ESTs, 25 Proteins product : predicted gene, EG629557 transcript_id : XM_894456.2

name	Rdx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353663 GeneID:19684 MGI:97887
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : radixin transcript_id : NM_009041.2

name	9830163H01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47894414 GeneID:414109 MGI:3041213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9830163H01 gene transcript_id : NM_001001500.1

name	Zc3h12c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386107 GeneID:244871 MGI:3026959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins product : zinc finger CCCH type containing 12C transcript_id : XM_146893.6

name	LOC100042876 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259932 GeneID:100042876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Btf3 protein transcript_id : XM_001478980.1

name	AI593442 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342698 GeneID:330941 MGI:2143099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI593442 transcript_id : NM_177907.2

name	AI593442 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381639 GeneID:330941 MGI:2143099
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI593442 transcript_id : NM_178906.3

name	Gm1715 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259934 GeneID:382139 MGI:2686561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : gene model 1715, (NCBI) transcript_id : XM_001478987.1

name	Ddx10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386109 GeneID:77591 MGI:1924841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 145 ESTs, 7 Proteins product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 transcript_id : XM_284494.5

name	Exph5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341147 GeneID:320051 MGI:2443248
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exophilin 5 transcript_id : NM_176846.2

name	Kdelc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55956900 GeneID:68304 MGI:1923765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KDEL (Lys-Asp-Glu-Leu) containing 2 transcript_id : NM_212445.2

name	4930550C14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802091 GeneID:75311 MGI:1922561
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930550C14 gene transcript_id : NM_029247.2

name	Atm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680739 GeneID:11920 MGI:107202
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxia telangiectasia mutated homolog (human) transcript_id : NM_007499.1

name	Npat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487234 GeneID:244879 MGI:107605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear protein in the AT region transcript_id : NM_001081152.1

name	Acat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130035 GeneID:110446 MGI:87870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acetyltransferase 1 transcript_id : NM_144784.3

name	Cul5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343675 GeneID:75717 MGI:1922967
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cullin 5 transcript_id : NM_027807.2

name	Rab39 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891651 GeneID:270160 MGI:2442855
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB39, member RAS oncogene family transcript_id : NM_175562.3

name	EG434404 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259968 GeneID:434404 MGI:3643565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 1756 ESTs, 7 Proteins product : predicted gene, EG434404 transcript_id : XM_486222.5

name	LOC100038958 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259970 GeneID:100038958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to Ubtf protein transcript_id : XM_001471979.1

name	Slc35f2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254174 GeneID:72022 MGI:1919272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member F2 transcript_id : NM_028060.2

name	Sln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124376991 GeneID:66402 MGI:1913652
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sarcolipin transcript_id : NM_025540.2

name	LOC100038996 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259972 GeneID:100038996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 40 ESTs, 1 Protein product : similar to proapoptotic protein transcript_id : XM_001472003.1

name	Elmod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922692 GeneID:270162 MGI:3583900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELMO domain containing 1 transcript_id : NM_177769.4

name	Fdx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679765 CCDS:CCDS23178.1 GeneID:14148 MGI:103224
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : adrenodoxin product : ferredoxin 1 protein_id : NP_032022.1

name	EG629557 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930042 GeneID:629557 MGI:3646966
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_899549.1

name	Rdx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677699 GeneID:19684 MGI:97887
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005902 - microvillus [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0045176 - apical protein localization [Evidence IMP]; GO:0051016 - barbed-end actin filament capping [Evidence IEA]; GO:0030033 - microvillus biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation product : radixin protein_id : NP_033067.1

name	9830163H01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47894415 GeneID:414109 MGI:3041213
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC414109 protein_id : NP_001001500.1

name	Zc3h12c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386108 GeneID:244871 MGI:3026959
definition	codon_start : 1 product : similar to hCG39183 protein_id : XP_146893.6

name	LOC100042876 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259933 GeneID:100042876
definition	codon_start : 1 product : similar to Btf3 protein protein_id : XP_001479030.1

name	AI593442 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244544 GeneID:330941 MGI:2143099
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC330941 isoform 1 protein_id : NP_808575.1

name	AI593442 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725766 GeneID:330941 MGI:2143099
definition	codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC330941 isoform 2 protein_id : NP_849237.1

name	Gm1715 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259935 GeneID:382139 MGI:2686561
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479037.1

name	Ddx10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930055 GeneID:77591 MGI:1924841
definition	codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein_id : XP_284494.3

name	Exph5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28849901 CCDS:CCDS23181.1 GeneID:320051 MGI:2443248
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : synaptotagmin-like homologue lacking C2 domains b protein_id : NP_789816.1

name	Kdelc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47078285 CCDS:CCDS23182.1 GeneID:68304 MGI:1923765
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 product : KDEL (Lys-Asp-Glu-Leu) containing 2 protein protein_id : NP_997610.1

name	4930550C14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312924 CCDS:CCDS23183.1 GeneID:75311 MGI:1922561
definition	codon_start : 1 product : hypothetical protein LOC75311 protein_id : NP_083523.1

name	Atm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680740 GeneID:11920 MGI:107202
definition	GO_component : GO:0005634 - nucleus [Evidence TAS]; GO:0005819 - spindle [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence ISS]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence TAS] [Evidence IDA]; GO:0047485 - protein N-terminus binding [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence TAS] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IGI]; GO:0007049 - cell cycle [Evidence IEA]; GO:0000077 - DNA damage checkpoint [Evidence IMP]; GO:0008630 - DNA damage response, signal transduction resulting in induction of apoptosis [Evidence IMP]; GO:0006281 - DNA repair [Evidence IDA] [Evidence IMP]; GO:0007292 - female gamete generation [Evidence IMP]; GO:0007507 - heart development [Evidence IGI]; GO:0007094 - mitotic spindle checkpoint [Evidence ISS]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence TAS]; GO:0010212 - response to ionizing radiation [Evidence ISS]; GO:0001756 - somitogenesis [Evidence IGI] codon_start : 1 exception : mismatches in translation note : ataxia telangiectasia gene mutated in human beings product : ataxia telangiectasia mutated homolog protein_id : NP_031525.1

name	Npat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487235 GeneID:244879 MGI:107605
definition	codon_start : 1 product : nuclear protein in the AT region protein_id : NP_001074621.1

name	Acat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450129 CCDS:CCDS23184.1 GeneID:110446 MGI:87870
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IDA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : acetyl-Coenzyme A acetyltransferase 1 precursor protein_id : NP_659033.1

name	Cul5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076981 GeneID:75717 MGI:1922967
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : vasopressin-activated calcium-mobilizing receptor protein product : cullin 5 protein_id : NP_082083.1

name	Rab39 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425356 CCDS:CCDS23185.1 GeneID:270160 MGI:2442855
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB39, member RAS oncogene family protein_id : NP_780771.1

name	EG434404 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82929979 GeneID:434404 MGI:3643565
definition	codon_start : 1 product : hypothetical protein protein_id : XP_486222.2

name	LOC100038958 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259971 GeneID:100038958
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472029.1

name	Slc35f2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254175 GeneID:72022 MGI:1919272
definition	codon_start : 1 exception : mismatches in translation product : solute carrier family 35, member F2 protein_id : NP_082336.2

name	Sln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384962 GeneID:66402 MGI:1913652
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0016529 - sarcoplasmic reticulum [Evidence IEA] GO_function : GO:0030234 - enzyme regulator activity [Evidence IEA] codon_start : 1 product : sarcolipin protein_id : NP_079816.1

name	LOC100038996 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259973 GeneID:100038996
definition	codon_start : 1 product : similar to proapoptotic protein protein_id : XP_001472053.1

name	Elmod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82617676 GeneID:270162 MGI:3583900
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006909 - phagocytosis [Evidence IEA] codon_start : 1 product : ELMO domain containing 1 protein_id : NP_808437.2

clone name	MSMg01-478H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-155M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-125N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507M16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-083N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098B23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-510H11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-360M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-198M20.b	B6Ng01-198M20.g
ACC	GA020308	GA020309
length	1,120	1,100
definition	B6Ng01-198M20.b	B6Ng01-198M20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(52,764,568 - 52,765,674)	(52,864,275 - 52,865,389)
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggacgtggagaaagaggagcactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcaggctggcggttcctca gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc atatatccagaagatgttccaactggtaagaaggacacatgctccactat cttcatagcagccttatttataatagccagaagctggaaagaatcattca ttctttcttaaaaattatttatatgagtgcagtatagctatcttcagaca caccagaagagggcatcagatcccaattacagatggttgtgagccaccat gtggttgctggaaattgaactcagtaactctggaagagcagtcagtgctc ttaagcactgagccatctctccagcccctcttttatctgatcttgggact cttttcctcctgttgggttgccttgtccagcctcagtattagagcttttg ccttgtcttattgtgttgttttattgtgtttggttgttgtctcttggagg tctgctcttttctgaagggagatgaaggagtgtggatttagaggatgtgg caaaggaaactgtgaggagtgggggaaagggaaactgtggtcaggatgta ttgcatgagagaagaatccactaaaaaaaaaaaacaatatggagctcaat catttacccagaaccagacacaatctggaatctgactctctctactccta tgcagctttaacaaatcaagttttgttcaggctcattcatttacaaactt ggctggccatccagcatcaccaagtatggagaatcatggggttcccaaag gagctctcttataatcctatggtctgtggtcttctacaggctagacaatc agctccttgatggcaatacactgcattgccactctggtcatattaaccat ggggatcacatccgagttct	gaattcaacttgtaacttgggtatttctgggttaattcctaggcaaatgg atggacttggagggtatcatcctgagtgaggtaacccaatcacaaaagaa ctcacacgatatgtactcactgataagtggatattaacccagaaacttag aacacctgggattcttttaatagacacaacttcgtgccatgatctaattc tgcaggatgttctgatttaacagggaggaagcattagcgttttaagttga ccagaaaattctgatgaataggtaggtttgggaatcaccaatcttcctca caacctcagctttggtgatagcagcaatgtaggccttttaggataaaaat ggagttttgttaacaaaaactggtatcgaagtcccagggagttgttgcta ccaggtattaggatcgttgcattttgtcttattgcatttaaactttactt ttgattatgcccatatctgtgtgtctgtgcatggatatgtgcatctgatt gcaggtttcttcagtggccagaagagggcatcaaatttcttggttctaga actcacaggtgggtgctgggaactgaacttggatcctctgggaaaacccc tgagctgtctctttagtccccctgcttctactccataccgattgtttgtt gtttgtttgtttgttttttgttatgttttaattcagggtcttatgtagct cagcctgatctcaaaacctctgtgtaacttttaacttctgatcctcctgc tttaatccacaagtattaggattacaggcatattccaccatgcccagtct catgtgatgctggggacagaaatcaaggcttcatgcacactaggcaagca ctttaccaacttagtgagagctcaatatctaggataagtactttatgaaa gagttctcttactgccattcttcaaggatgagttagaaagcactcacaat ccacaaaccaaaggagacagaagtttggcagtggtttgaaaaaaattctt catagtcagttcagtgcccaagggaggatatgcctgactcagcaatctga ctctggagagctatctcataacagctctgattatcatcgtgggatacctt
quality values	Open. Hide. 58 24 40 38 58 58 58 31 25 54 58 58 49 34 34 58 36 24 32 49 47 62 62 49 62 62 62 62 62 62 62 47 30 22 26 20 26 21 43 43 30 28 35 49 49 62 62 62 47 62 62 62 59 51 62 62 59 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 46 35 49 62 59 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 52 58 58 52 58 58 58 58 58 58 58 58 54 58 58 54 58 54 58 58 58 58 58 54 47 54 45 54 58 54 58 58 58 54 54 42 52 54 52 41 52 54 52 58 58 58 58 52 52 52 58 58 49 40 58 58 58 58 47 47 54 42 58 52 58 58 58 46 52 47 52 54 58 54 58 52 54 58 58 58 46 54 51 38 44 49 54 58 49 43 49 33 52 54 58 58 53 52 51 49 53 49 50 58 53 58 52 58 58 58 58 58 58 49 54 51 51 58 41 58 58 52 50 37 58 58 37 58 50 52 58 37 58 58 46 53 49 58 58 53 54 51 58 51 58 39 39 58 51 33 41 48 49 51 53 53 58 43 58 39 46 20 46 37 42 58 47 40 49 52 49 36 49 58 42 53 37 58 42 15 49 39 41 30 35 28 53 53 53 26 51 54 24 51 58 50 53 38 31 26 33 39 32 31 53 20 52 41 29 54 49 49 51 31 39 54 51 24 54 46 52 49 29 50 50 34 49 41 32 53 38 29 31 49 54 54 54 39 37 54 35 30 54 45 42 54 31 34 42 54 32 31 31 23 31 34 20 51 14 13 47 40 17 16 44 20 13 24 35 34 26 15 47 19 31 9 9 40 26 32 31 45 23 16 18 10 20 20 15 52 47 40 45 53 40 31 22 33 10 9 14 25 16 27 32 35 25 28 31 19 12 12 16 15 21 26 46 23 26 19 51 6 8 19 51 33 17 15 24 29 32 12 9 26 20 42 26 27 31 33 17 42 30 21 31 29 30 32 23 43 28 31 27 24 34 30 23 19 24 10 6 14 16 28 29 32 29 24 30 13 42 14 41 10 12 11 37 30 31 27 19 28 31 19 46 46 20 24 14 25 31 17 25 37 6 7 18 11 11 16 21 29 29 32 15 9 16 12 38 28 17 30 20 11 19 13 17 18 32 9 16 11 23 23 33 10 9 24 27 31 31 21 29 10 6 7 17 19 21 17 6 6 22 17 10 29 21 11 8 8 6 41 43 5 5 8 16 44 21 24 44 9 32 22 12 6 18 13 10 7 10 17 33 33 11 8 11 24 22 10 12 14 20 14 33 11 26 19 13 5 12 4 4 4 11 17 25 6 11 24 24 8 5 15 6 32 8 8 10 5 28 17 30 14 9 5 10 15 34 6 5 7 7 9 15 12 10 9 6 25 8 4 10 6 8 6 5 5 10 14 3 24 13 10 24 23 12 7 31 18 9 23 16 13 17 10 21 7 19 9 11 7 6 9 18 17 11 6 11 7 5 9 8 10 8 6 4 22 5 13 9 3 3	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr9_52764568_52765674
seq2: B6Ng01-198M20.b_51_1170

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGCGTGGACGTGGAGAAAGAGGAGCACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCGTGGACGTGGAGAAAGAGGAGCACTCCTCCATTGTTGGTG  200

seq1  GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGGCTGGCGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGGCTGGCGGTTCCTCA  250

seq1  GAAAATTGGACATAGTACTACCAGAGGATCCAGCAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGACATAGTACTACCAGAGGATCCAGCAATACCTCTCCTGGGC  300

seq1  ATATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTCCACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTCCACTAT  350

seq1  CTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAATCATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAATCATTCA  400

seq1  TTCTTTCTTAAAAATTATTTATATGAGTGCAGTATAGCTATCTTCAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTAAAAATTATTTATATGAGTGCAGTATAGCTATCTTCAGACA  450

seq1  CACCAGAAGAGGGCATCAGATCCCAATTACAGATGGTTGTGAGCCACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAGAGGGCATCAGATCCCAATTACAGATGGTTGTGAGCCACCAT  500

seq1  GTGGTTGCTGGAAATTGAACTCAGTAACTCTGGAAGAGCAGTCAGTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGCTGGAAATTGAACTCAGTAACTCTGGAAGAGCAGTCAGTGCTC  550

seq1  TTAAGCACTGAGCCATCTCTCCAGCCCCTCTTTTATCTGATCTTGGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCACTGAGCCATCTCTCCAGCCCCTCTTTTATCTGATCTTGGGACT  600

seq1  CTTTTCCTCCTGTTGGGTTGCCTTGTCCAGCCTCAGTATTAGAGCTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTCCTGTTGGGTTGCCTTGTCCAGCCTCAGTATTAGAGCTTTTG  650

seq1  CCTTGTCTTATTGTGTTGTTTTATTGTGTTTGGTTGTTGTCTCTTGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCTTATTGTGTTGTTTTATTGTGTTTGGTTGTTGTCTCTTGGAGG  700

seq1  TCTGCTCTTTTCTGAAGGGAGATGAAGGAGTGTGGATTTAGAGGATGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTTTTCTGAAGGGAGATGAAGGAGTGTGGATTTAGAGGATGTGG  750

seq1  CAAAGGAAACTGTGAGGAGTGGGGGAAAGGGAAACTGTGGTCAGGATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAAACTGTGAGGAGTGGGGGAAAGGGAAACTGTGGTCAGGATGTA  800

seq1  TTGCATGAGAGAAGAATCCACTTAAAAAAAAAAACCAATATGGAGCTCAA  850
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  TTGCATGAGAGAAGAATCCAC-TAAAAAAAAAAAACAATATGGAGCTCAA  849

seq1  TCATTTA-CCAGAACCAGACACAATCTGGAATCTGACTCTCTCTACTTCT  899
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  TCATTTACCCAGAACCAGACACAATCTGGAATCTGACTCTCTCTACTCCT  899

seq1  ATGCAGC-TTAACAAATCAAG-TTTGTTCAGGCTCATTCATTTACAAACT  947
      ||||||| ||||||||||||| ||||||||||||||||||||||||||| 
seq2  ATGCAGCTTTAACAAATCAAGTTTTGTTCAGGCTCATTCATTTACAAAC-  948

seq1  TTGGCTGG-CATCCAGCATCACC-AGTAT-GAG-ATCATGGG--TCCC-A  990
      |||||||| |||||||||||||| ||||| ||| ||||||||  |||| |
seq2  TTGGCTGGCCATCCAGCATCACCAAGTATGGAGAATCATGGGGTTCCCAA  998

seq1  AGGAGCTC-CTTATA--TCTATGGTCTGTGGTCTTCCACA-GCTA-ACAA  1035
      |||||||| ||||||   |||||||||||||||||| ||| |||| ||||
seq2  AGGAGCTCTCTTATAATCCTATGGTCTGTGGTCTTCTACAGGCTAGACAA  1048

seq1  TCAGCTCCCTGAT-GCATTACAACTGCCATTTCCACTCTGGTCATATT-A  1083
      |||||||| |||| ||| ||| |||| |||| |||||||||||||||| |
seq2  TCAGCTCCTTGATGGCAATAC-ACTG-CATTGCCACTCTGGTCATATTAA  1096

seq1  CCATGGGGATCACATCAGAGTTCT  1107
      |||||||||||||||| |||||||
seq2  CCATGGGGATCACATCCGAGTTCT  1120

seq1: chr9_52864275_52865389
seq2: B6Ng01-198M20.g_68_1167 (reverse)

seq1  AAGGTAATCCCACAGATTGATAATCCAAGAGCTGGTTATGAGATAGGCTT  50
      ||||| ||||||| || ||||||||  |||||| ||||||||||||    
seq2  AAGGT-ATCCCAC-GA-TGATAATC--AGAGCT-GTTATGAGATAG----  40

seq1  CCTTCCAGAGTCAAGGATTGCTGAGTTCCAGCCATATCCCTCCCCTTGGG  100
      |  ||||||||||  |||||||||||  ||| |||||||   ||||||||
seq2  CTCTCCAGAGTCA--GATTGCTGAGT--CAGGCATATCC--TCCCTTGGG  84

seq1  CACTTGAACTGACTATTCCAAGAATTTTTTTC-AACCACTGCC-AACTTC  148
      ||| ||||||||||||   ||||||||||||| |||||||||| ||||||
seq2  CAC-TGAACTGACTAT--GAAGAATTTTTTTCAAACCACTGCCAAACTTC  131

seq1  TGTCTCCTTGGTTTTGTGGA-TGTGAGTGCTTTCTAACTCATCCTTGAAG  197
      ||||||||| | |||||||| |||||||||||||||||||||||||||||
seq2  TGTCTCCTTTGGTTTGTGGATTGTGAGTGCTTTCTAACTCATCCTTGAAG  181

seq1  -ATGGCAGTAAGAGAACTCTTTCATAAAGTACTTATCCTAGATATTGAGC  246
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGTAAGAGAACTCTTTCATAAAGTACTTATCCTAGATATTGAGC  231

seq1  TCTCACTAAGTTGGTAAAGTGCTTGCCTAGTGTGCATGAAGCCTTGATTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTAAGTTGGTAAAGTGCTTGCCTAGTGTGCATGAAGCCTTGATTT  281

seq1  CTGTCCCCAGCATCACATGAGACTGGGCATGGTGGAATATGCCTGTAATC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCCAGCATCACATGAGACTGGGCATGGTGGAATATGCCTGTAATC  331

seq1  CTAATACTTGTGGATTAAAGCAGGAGGATCAGAAGTTAAAAGTTACACAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACTTGTGGATTAAAGCAGGAGGATCAGAAGTTAAAAGTTACACAG  381

seq1  AGGTTTTGAGATCAGGCTGAGCTACATAAGACCCTGAATTAAAACATAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGAGATCAGGCTGAGCTACATAAGACCCTGAATTAAAACATAAC  431

seq1  AAAAAACAAACAAACAAACAACAAACAATCGGTATGGAGTAGAAGCAGGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAACAAACAAACAACAAACAATCGGTATGGAGTAGAAGCAGGG  481

seq1  GGACTAAAGAGACAGCTCAGGGGTTTTCCCAGAGGATCCAAGTTCAGTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAAAGAGACAGCTCAGGGGTTTTCCCAGAGGATCCAAGTTCAGTTC  531

seq1  CCAGCACCCACCTGTGAGTTCTAGAACCAAGAAATTTGATGCCCTCTTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCCACCTGTGAGTTCTAGAACCAAGAAATTTGATGCCCTCTTCT  581

seq1  GGCCACTGAAGAAACCTGCAATCAGATGCACATATCCATGCACAGACACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTGAAGAAACCTGCAATCAGATGCACATATCCATGCACAGACACA  631

seq1  CAGATATGGGCATAATCAAAAGTAAAGTTTAAATGCAATAAGACAAAATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGGGCATAATCAAAAGTAAAGTTTAAATGCAATAAGACAAAATG  681

seq1  CAACGATCCTAATACCTGGTAGCAACAACTCCCTGGGACTTCGATACCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGATCCTAATACCTGGTAGCAACAACTCCCTGGGACTTCGATACCAG  731

seq1  TTTTTGTTAACAAAACTCCATTTTTATCCTAAAAGGCCTACATTGCTGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTAACAAAACTCCATTTTTATCCTAAAAGGCCTACATTGCTGCT  781

seq1  ATCACCAAAGCTGAGGTTGTGAGGAAGATTGGTGATTCCCAAACCTACCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAAAGCTGAGGTTGTGAGGAAGATTGGTGATTCCCAAACCTACCT  831

seq1  ATTCATCAGAATTTTCTGGTCAACTTAAAACGCTAATGCTTCCTCCCTGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAGAATTTTCTGGTCAACTTAAAACGCTAATGCTTCCTCCCTGT  881

seq1  TAAATCAGAACATCCTGCAGAATTAGATCATGGCACGAAGTTGTGTCTAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGAACATCCTGCAGAATTAGATCATGGCACGAAGTTGTGTCTAT  931

seq1  TAAAAGAATCCCAGGTGTTCTAAGTTTCTGGGTTAATATCCACTTATCAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAATCCCAGGTGTTCTAAGTTTCTGGGTTAATATCCACTTATCAG  981

seq1  TGAGTACATATCGTGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACATATCGTGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGA  1031

seq1  TGATACCCTCCAAGTCCATCCATTTGCCTAGGAATTAACCCAGAAATACC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCCTCCAAGTCCATCCATTTGCCTAGGAATTAACCCAGAAATACC  1081

seq1  CAAGTTACAAGTTGAATTC  1115
      |||||||||||||||||||
seq2  CAAGTTACAAGTTGAATTC  1100

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information