MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-199E14
Chromosome	9 (Build37)
Map Location	7,281,024 - 7,281,350
singlet/doublet	singlet
Overlap gene	Mmp13
Upstream gene	Pdgfd, EG664919, LOC100039400, LOC100039418, EG547034, Dync2h1, LOC100039658, Dcun1d5
Downstream gene	Mmp12, Mmp1b, Mmp3, Mmp1a, Mmp10, Mmp8, Mmp27, Mmp20, Mmp7, LOC665057, LOC100039782, Tmem123, Birc2, Birc3, Yap1, EG665090, 9230110C19Rik, AK129341, LOC100039855, 1700018P22Rik, LOC665108, 1700128F08Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pdgfd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664919 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039418 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	EG547034 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Dync2h1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039658 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Dcun1d5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76863 MGI:1924113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17386 MGI:1340026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17381 MGI:97005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83996 MGI:1933847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17392 MGI:97010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83995 MGI:1933846
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17384 MGI:97007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17394 MGI:1202395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234911 MGI:3039232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30800 MGI:1353466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17393 MGI:103189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665057 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 343 ESTs, 9 Proteins pseudo : _no_value

name	LOC100039782 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039782
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 980 ESTs, 5 Proteins

name	Tmem123 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71929 MGI:1919179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11797 MGI:1197009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Birc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11796 MGI:1197007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Yap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22601 MGI:103262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665090 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665090 MGI:3647003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	9230110C19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234912 MGI:3045346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AK129341 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234915 MGI:2680221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039855 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	1700018P22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69395 MGI:1916645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC665108 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76669 MGI:1923919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Pdgfd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802185 GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-derived growth factor, D polypeptide transcript_id : NM_027924.2

name	EG664919 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385569 GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG664919 transcript_id : XM_973693.1

name	LOC100039418 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259439 GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001472846.1

name	EG547034 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259441 GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG547034 transcript_id : XM_886250.3

name	Dync2h1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:72534791 GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 2 heavy chain 1 transcript_id : NM_029851.2

name	LOC100039658 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259448 GeneID:100039658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039658 transcript_id : XM_001473007.1

name	Dcun1d5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130656 GeneID:76863 MGI:1924113
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) transcript_id : NM_029775.2

name	Mmp13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678895 GeneID:17386 MGI:1340026
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 13 transcript_id : NM_008607.1

name	Mmp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115392137 GeneID:17381 MGI:97005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 12 transcript_id : NM_008605.3

name	Mmp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115385969 GeneID:83996 MGI:1933847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 1b (interstitial collagenase) transcript_id : NM_032007.3

name	Mmp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754713 GeneID:17392 MGI:97010
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 3 transcript_id : NM_010809.1

name	Mmp1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778986 GeneID:83995 MGI:1933846
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 1a (interstitial collagenase) transcript_id : NM_032006.3

name	Mmp10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130723 GeneID:17384 MGI:97007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 10 transcript_id : NM_019471.2

name	Mmp8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801809 GeneID:17394 MGI:1202395
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 8 transcript_id : NM_008611.3

name	Mmp27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71892409 GeneID:234911 MGI:3039232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 27 transcript_id : NM_001030289.1

name	Mmp20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130938 GeneID:30800 MGI:1353466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 20 (enamelysin) transcript_id : NM_013903.2

name	Mmp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227218 GeneID:17393 MGI:103189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 7 transcript_id : NM_010810.3

name	LOC100039782 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259453 GeneID:100039782
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 980 ESTs, 5 Proteins product : similar to ribosomal protein transcript_id : XM_001473311.1

name	Tmem123 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526937 GeneID:71929 MGI:1919179
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 123 transcript_id : NM_133739.1

name	Birc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680697 GeneID:11797 MGI:1197009
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 2 transcript_id : NM_007465.1

name	Birc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803312 GeneID:11796 MGI:1197007
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : baculoviral IAP repeat-containing 3 transcript_id : NM_007464.2

name	Yap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130327 GeneID:22601 MGI:103262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : yes-associated protein 1 transcript_id : NM_009534.2

name	EG665090 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385573 GeneID:665090 MGI:3647003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665090 transcript_id : XM_974531.1

name	9230110C19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802300 GeneID:234912 MGI:3045346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9230110C19 gene transcript_id : NM_199017.2

name	AK129341 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113866018 GeneID:234915 MGI:2680221
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AK129341 transcript_id : NM_001045524.1

name	LOC100039855 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259455 GeneID:100039855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100039855 transcript_id : XM_001473651.1

name	1700018P22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259443 GeneID:69395 MGI:1916645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 1700018P22 gene transcript_id : XM_001472999.1

name	Pdgfd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229137 CCDS:CCDS22801.1 GeneID:71785 MGI:1919035
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005161 - platelet-derived growth factor receptor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence ISS]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : platelet-derived growth factor, D polypeptide protein_id : NP_082200.1

name	EG664919 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385570 GeneID:664919 MGI:3644302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978787.1

name	LOC100039418 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259440 GeneID:100039418
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472896.1

name	EG547034 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259442 GeneID:547034 MGI:3643789
definition	codon_start : 1 product : similar to 5-methyltetrahydrofolate-homocysteine methyltransferase protein_id : XP_891343.3

name	Dync2h1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:72534792 GeneID:110350 MGI:107736
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042624 - ATPase activity, uncoupled [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008105 - asymmetric protein localization [Evidence IMP]; GO:0042384 - cilium biogenesis [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0016485 - protein processing [Evidence IMP] codon_start : 1 note : dynein heavy chain 2; cytoplasmic dynein heavy chain 2 product : dynein, cytoplasmic, heavy chain 2 protein_id : NP_084127.2

name	LOC100039658 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259449 GeneID:100039658
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473057.1

name	Dcun1d5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956220 GeneID:76863 MGI:1924113
definition	codon_start : 1 product : DCN1, defective in cullin neddylation 1, domain containing 5 protein_id : NP_084051.1

name	Mmp13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678896 CCDS:CCDS22803.1 GeneID:17386 MGI:1340026
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008133 - collagenase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004232 - interstitial collagenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IDA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030282 - bone mineralization [Evidence IMP]; GO:0051216 - cartilage development [Evidence IMP]; GO:0030574 - collagen catabolism [Evidence IDA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : collagenase-1; interstitial collagenase; Collagenase-3 product : matrix metalloproteinase 13 protein_id : NP_032633.1

name	Mmp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115392138 CCDS:CCDS22804.1 GeneID:17381 MGI:97005
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004234 - macrophage elastase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : macrophage metalloelastase; macrophage elastase; macrophage-metalloelastase product : matrix metalloproteinase 12 protein_id : NP_032631.3

name	Mmp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115385970 CCDS:CCDS22805.1 GeneID:83996 MGI:1933847
definition	EC_number : 3.4.24.7 GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004232 - interstitial collagenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : collagenase-like B; matrix metalloproteinase 1b (interstitial collagenase) product : matrix metalloproteinase 1b precursor protein_id : NP_114396.3

name	Mmp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754714 CCDS:CCDS22806.1 GeneID:17392 MGI:97010
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004248 - stromelysin 1 activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : progelatinase; stromelysin 1; stromelysin-1 product : matrix metalloproteinase 3 protein_id : NP_034939.1

name	Mmp1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14030785 GeneID:83995 MGI:1933846
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008133 - collagenase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004232 - interstitial collagenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : collagenase-like A product : matrix metalloproteinase 1a (interstitial collagenase) protein_id : NP_114395.1

name	Mmp10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506899 CCDS:CCDS22807.1 GeneID:17384 MGI:97007
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0030303 - stromelysin 2 activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : stromelysin 2 product : matrix metalloproteinase 10 protein_id : NP_062344.1

name	Mmp8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982184 CCDS:CCDS22808.1 GeneID:17394 MGI:1202395
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004232 - interstitial collagenase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008130 - neutrophil collagenase activity [Evidence ISS] [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence ISS] [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence ISS] [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Collagenase-2 product : matrix metalloproteinase 8 protein_id : NP_032637.2

name	Mmp27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71892410 GeneID:234911 MGI:3039232
definition	codon_start : 1 product : matrix metalloproteinase 27 protein_id : NP_001025460.1

name	Mmp20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305275 CCDS:CCDS22809.1 GeneID:30800 MGI:1353466
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : matrix metalloproteinase 20 (enamelysin) protein_id : NP_038931.1

name	Mmp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111955033 GeneID:17393 MGI:103189
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004235 - matrilysin activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : matrilysin, uterine; matrix metalloproteinase 7 product : matrix metallopeptidase 7 protein_id : NP_034940.2

name	LOC100039782 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259454 GeneID:100039782
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_001473361.1

name	Tmem123 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526938 CCDS:CCDS22810.1 GeneID:71929 MGI:1919179
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : pro-oncosis receptor inducing membrane injury protein_id : NP_598500.1

name	Birc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680698 CCDS:CCDS22811.1 GeneID:11797 MGI:1197009
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : apoptosis inhibitor 2; baculoviral IAP repeat-containing 3 product : baculoviral IAP repeat-containing 2 protein_id : NP_031491.1

name	Birc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680696 CCDS:CCDS22812.1 GeneID:11796 MGI:1197007
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IEA]; GO:0006915 - apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : apoptosis inhibitor 1; baculoviral IAP repeat-containing 2 product : baculoviral IAP repeat-containing 3 protein_id : NP_031490.1

name	Yap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678615 GeneID:22601 MGI:103262
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IGI] GO_function : GO:0016563 - transcriptional activator activity [Evidence IGI] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] codon_start : 1 note : yes-associated protein, 65 kDa; yes-associated protein 1, 65kDa product : yes-associated protein 1 protein_id : NP_033560.1

name	EG665090 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385574 GeneID:665090 MGI:3647003
definition	codon_start : 1 product : hypothetical protein protein_id : XP_979625.1

name	9230110C19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841033 CCDS:CCDS22813.1 GeneID:234912 MGI:3045346
definition	codon_start : 1 product : hypothetical protein LOC234912 protein_id : NP_950182.1

name	AK129341 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113866019 GeneID:234915 MGI:2680221
definition	codon_start : 1 product : hypothetical protein LOC234915 protein_id : NP_001038989.1

name	LOC100039855 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259456 GeneID:100039855
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473701.1

name	1700018P22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259444 GeneID:69395 MGI:1916645
definition	codon_start : 1 product : hypothetical protein LOC69395 protein_id : XP_001473049.1

name	LOC100039400 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039400
definition	number : 1 pseudo : _no_value

name	LOC665108 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665108
definition	number : 1 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 1 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 2 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 3 pseudo : _no_value

name	LOC665057 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259452 GeneID:665057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 343 ESTs, 9 Proteins product : similar to Chromobox homolog 3 (HP1 gamma homolog, Drosophila) pseudo : _no_value transcript_id : XR_031139.1

clone name	MSMg01-346L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-083I01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-087K16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-464C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-497E14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-184K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-465B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117N22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-393L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-199E14.b	B6Ng01-199E14.g
ACC	GA020656	GA020657
length	1,200	327
definition	B6Ng01-199E14.b	B6Ng01-199E14.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctataggcttcttgtatgttcatgggcatctctttctttaggtta tggaagctttcttctataattttgttgaagatatttgctgtccctttaag ttgaaaatcttcattctcatctactcgtattatctgtaggtttggtcttc tcattgtgtcctggatttcctggctgttttgagttaggatctttttgcat tttgcattttctttgattgttgtgtacatattcccttggaatcttctgca cccgagtttctctcttccatctcttgtattctgttgttgatgctcccatc tctggttcttgatttctttcctagggtttctatctccaaaattgtctccg tttgggttttctttattgtttctatttccatttttggatcttggttggtt ttattcaattccatcacctgtttggtagtgtttcgtataactccctaagg atttttgtgtttcctctttaaatgcttctagctatttatatgtgtttttc tgtattttcctttttaaagtcctctatcatcattgtgagaagtgacttta gatcatgtcttgtttttatggtgtgatggtgtatccagaacttgctacag tgggagagtttggttctgatgatgccaagtaaccttggtttctgttgctt ctgttcttatgcttgcctcctgccatctgattatctcaagtgcttgctgc cctcaatatatgtgattggagcctgcccttcctataatcccagttgattc aggactcctcagagtccagcttttctttgtgatcctttgattgtgggctc ctgtgaacctgagattctggtgtgtcagagtttttggcagtcaagcttcc ctttgagaccctgaaatactgtgtgacccagctcttgttatcctgagatc ctgttgtcctaagatcctgggcctgttacagtgcctggaaagtgggtgtc tcctttgaaactgttggagcctctctggtctgttccaaaccaaggttaac catgaactgatcaaaaggtacctgagctctggttaggaatgctctgatgt cttgttcttgctgtcatagccccctcacaattagatggaacgaatgatgt gccactcacccagtgatctagattccttgagaatcctctggtactgcacc tttaatggctcagataatggtgatcttctgagggtctaataagtgtcgta	aaatggcttatatatgcatgctcactaaggtattgtttctgtgtgattac ttagatagcaaaaaaataacctgattagaatcaatgagaattttacttaa ttactaccaagtgtgtgaacaacagatcttgaacctcaggatgaccttaa attacatgtaaaagtgtcaagaggcagagggttatgtcaaaattcaaatt agggctggagtggagagtaatttataaagattcataattatcataactat tcttttatttttgttttaattacaatgggaattatctttgaatattaacg ttcaaaactataacttgttttaagaca
quality values	Open. Hide. 58 29 26 34 58 53 58 52 54 42 58 49 58 62 62 62 62 62 62 62 56 47 47 54 62 41 33 54 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 49 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 42 54 58 58 58 54 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 54 58 58 54 58 58 46 49 58 58 58 58 58 58 54 58 50 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 54 39 58 53 58 51 41 58 54 50 58 58 52 58 58 46 51 58 58 58 50 58 58 51 58 58 50 49 54 48 50 58 58 50 54 40 58 35 42 58 58 58 41 49 58 53 51 58 53 46 44 26 26 47 48 44 27 58 50 39 53 41 37 51 58 52 54 54 58 36 33 51 51 58 51 51 54 49 58 46 54 47 39 35 53 53 54 41 54 41 51 40 53 52 50 49 49 51 50 58 52 50 44 50 36 47 37 47 51 50 50 52 53 39 53 53 42 39 33 41 53 53 53 58 50 51 37 52 47 39 44 41 53 52 31 41 42 40 52 43 35 47 46 40 42 35 33 44 25 49 26 40 38 31 53 43 54 54 38 53 34 52 37 39 39 24 37 53 37 54 35 32 32 53 31 33 29 20 52 40 34 21 49 39 21 53 24 54 51 32 42 25 34 15 33 39 40 39 35 37 35 54 54 20 52 28 51 51 39 31 31 34 33 29 51 32 49 52 31 28 8 49 31 28 32 47 24 31 52 45 39 40 32 32 29 33 31 32 31 32 31 46 13 21 15 34 41 31 37 29 25 51 15 30 31 31 41 21 46 16 43 51 51 51 33 22 40 29 31 31 36 38 25 29 25 31 30 15 9 18 17 48 46 6 9 31 22 19 18 46 32 27 29 32 47 29 38 23 29 31 32 31 31 27 18 31 23 46 33 17 16 24 28 28 31 23 31 14 22 24 31 27 33 25 32 31 23 31 23 19 30 25 31 9 46 41 25 29 31 25 9 39 9 32 30 19 19 25 31 41 33 25 22 15 29 29 16 11 18 25 33 21 25 25 26 31 21 29 13 41 13 18 31 21 44 11 12 20 9 9 15 18 20 25 48 31 21 38 47 31 15 22 21 8 6 8 28 23 14 17 9 10 6 22 32 10 6 34 17 16 15 23 24 31 22 26 27 48 31 15 18 11 10 17 32 11 11 16 11 7 30 10 7 7 28 16 23 32 32 26 14 9 18 25 32 19 16 28 7 24 6 22 17 19 18 4 17 7 10 14 17 11 24 28 13 5 13 8 3 3 4 4 3 12 19 24 28 9 12 16 9 3 5 6 8 8 21 5 7 6 25 8 15 5 16 11 24 8 11 6 28 28 28 16 18 11 16 10 6 16 16 13 18 6 22 19 6 16 16 13 7 3 9 12 11 8 20 7 15 7 3 2 2 2 9 6 9 5 4 10 19 9 9 4 5 8 9 13 3 8 4 22 5 6 5 7 14 11 7 18 3 5 3 5 20 8 8 8 8 8 13 3 5 4 2 3 4 3 1 4 25 24 7 8 5 9 5 5 21 8 12 1 2 2 3 2 2 4 12 13 3 4 18 5 15 13 8 21 4 7 6 13 28 10 14 18 8 12 4 3 10 17 3 3 15 4 4 6 4 4	Open. Hide. 35 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 59 59 59 43 43 43 56 49 51 30 27 27 22 13 31 46 46 59 59 48 30 48 40 32 34 36 34 12 28 22 27 36 31 34 23 18 21 20 19 24 49 51 50 24 23 18 28 19 19 34 34 27 15 36 40 28 34 30 27 34 46 30 43 24 34 27 38 12 34 25 21 27 23 23 28 18 19 15 18 28 27 16 23 18 34 34 28 27 18 18 13 27 34 23 34 34 27 28 18 11 28 18 34 18 38 34 24 34 38 13 10 12 11 24 19 39 37 31 38 43 34 34 23 14 24 26 34 34 27 21 39 27 34 34 13 18 21 10 24 13 13 13 15 31 18 19 16 23 31 24 13 12 13 18 18 56 9 9 13 13 8 9 8 18 18 23 18 12 27 21 30 30 26 27 23 23 13 23 13 18 13 14 14 12 9 12 8 9 10 14 13 13 8 10 8 10 5 9 5 13 8 8 8 14 18 13 24 12 13 10 6 13 10 23 10 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_7281024_7281350
seq2: B6Ng01-199E14.g_70_396

seq1  AAATGGCTTATATATGCATGCTCACTAAGGTATTGTTTCTGTGTGATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCTTATATATGCATGCTCACTAAGGTATTGTTTCTGTGTGATTAC  50

seq1  TTAGATAGCAAAAAAATAACCTGATTAGAATCAATGAGAATTTTACTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAGCAAAAAAATAACCTGATTAGAATCAATGAGAATTTTACTTAA  100

seq1  TTACTACCAAGTGTGTGAACAACAGATCTTGAACCTCAGGATGACCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACCAAGTGTGTGAACAACAGATCTTGAACCTCAGGATGACCTTAA  150

seq1  ATTACATGTAAAAGTGTCAAGAGGCAGAGGGTTATGTCAAAATTCAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGTAAAAGTGTCAAGAGGCAGAGGGTTATGTCAAAATTCAAATT  200

seq1  AGGGCTGGAGTGGAGAGTAATTTATAAAGATTCATAATTATCATAACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGGAGTGGAGAGTAATTTATAAAGATTCATAATTATCATAACTAT  250

seq1  ACAGTTATTTTTGCTTTAATTACAATGGGAATTATCTCTGAATATGAACG  300
       |  ||||||||| ||||||||||||||||||||||| ||||||| ||||
seq2  TCTTTTATTTTTGTTTTAATTACAATGGGAATTATCTTTGAATATTAACG  300

seq1  TTCAAAACTAGAACTTGTAACAAGACA  327
      |||||||||| |||||||   ||||||
seq2  TTCAAAACTATAACTTGTTTTAAGACA  327

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information