BAC Information

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BAC

Clone NameB6Ng01-201D06
Chromosome9 (Build37)
Map Location 32,859,266 - 32,860,375
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666622, Grit, Kcnj5, Kcnj1, Fli1, LOC669759, LOC100041398, Ets1, LOC100041426
Downstream geneLOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201D06.bB6Ng01-201D06.g
ACCGA022045GA022046
length8031,104
definitionB6Ng01-201D06.b B6Ng01-201D06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggaagactttaatttctttattcttccctgaccacattatca
gtgagtagagagttgttcagttctcatgggtttgtaggctttctgttgtt
atattgttgaaatccaactttaatccattttgatcagagaggatacaaga
ggatatttcaatttagtcgtatctgttgaggcttgttttgtgaccaacta
aatggccaattttggagaaggttctgtgagatgatgagagaaaggtatat
tccttgtgtttgggtgaaatattctgtatatatctgttaggtcaaaataa
aacctgttggttttttttctctgcttactttgtgtctcagcaacctgtca
gtttgtgagagtgtggtgttgatgtctaccaccattactgtgtaggaatt
gatgtgtgatttaagttttagcaatgtttcttttataagtgtgagagccc
ttgcatttggggcatatattatgctggtatggggcaaagatttttccctt
tgatgtgcataaaacgttcttacccatctcttttggttgactttggttga
aagtctcttttattaaagaatctctactccagctttcttcttgggtatgt
ttgcttagaaaaccttttcctgaggtttatctttgtttctgagatgtgtt
tcttgtatgcagaagaacaatggaacctgtttttgcattaattttgttac
cccatgtctttttattggggaattgagtccattgatgttgagaaatatta
ataaataatgattgttaatccctgttattttgatgttgttggtgggtgga
gtg

gaattcacagcccttctcccagtcttctggctgtcatattctctccaccc
accttatggtagtttgaataagaatgtgccccatatttttatgctcgcat
attcggatgcttgggcatcagggagtggcttggaaggattagaaggtatg
gccttgttggaagaagtgtgttactggaaatggggctggaggttttcaga
gacccaaaccaggctcagtctctctctctctctccctctttccccccccc
ctctctctcctgcttcctgcagatccatatgtagaacttttcagcttctt
ctcaagggccatgtctacctttgttctgccgtgcttactgtcatgacaaa
tggattaaacttttgaagctgttagcaagcctcatttaaatgtgttcctt
tataagaggagatgttttggtcatagtgtctcttcacagcaatagaagac
caagacaccccttctctatgatattctttgaaccttagaagtgctgtata
aatgtccttaccttactttcacactcaaagcctgcaatctcaggcccctt
taggtagagcccacatctattttacctctagaacttcattcccaacatct
atggtcctgtactgagttcctctcccttcatgggtcaggggatacagccc
accaaacattgcaacacacctcagtctatgcagttgagtttagaggaact
tctgaactggaatcacattagctgtcccattcataagtcagcaccaagaa
gctgtaagaatgagctacaagcatcttgtagctgtcgcaaaagcagctaa
gccagagtaacagcaaattcagatctaaatgctctcttgacacagtgggg
tggggacacatactaaactaggaaaacaataaactaactccagatgccca
gatccaattacaaaatacacagcagtttgaaatacagggacaatgtgccc
actccccaagtcactaattccatagttatggtacatagtgagaacagtta
aagaaaactaagacacaaagtcgaggaaagaaacagattttcaagagtcg
gacgcgagaaaacacgagagttgagccttaaaagatagatgaagtctcga
ttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32859266_32860375
seq2: B6Ng01-201D06.g_73_1169

seq1  CAGCCCTTCTCCCAGTCTTCTGGCTGTCATATTCTCTCCACCCACCTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTCTCCCAGTCTTCTGGCTGTCATATTCTCTCCACCCACCTTAT  50

seq1  GGTAGTTTGAATAAGAATGTGCCCCATATTTTTATGCTCGCATATTCGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTGAATAAGAATGTGCCCCATATTTTTATGCTCGCATATTCGGA  100

seq1  TGCTTGGGCATCAGGGAGTGGCTTGGAAGGATTAGAAGGTATGGCCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGGCATCAGGGAGTGGCTTGGAAGGATTAGAAGGTATGGCCTTGT  150

seq1  TGGAAGAAGTGTGTTACTGGAAATGGGGCTGGAGGTTTTCAGAGACCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAGTGTGTTACTGGAAATGGGGCTGGAGGTTTTCAGAGACCCAA  200

seq1  ACCAGGCTCAGTCTCTCTCTCTCTCTCCCTCTTTCCCCCCCCCCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTCAGTCTCTCTCTCTCTCTCCCTCTTTCCCCCCCCCCTCTCTC  250

seq1  TCCTGCTTCCTGCAGATCCATATGTAGAACTTTTCAGCTTCTTCTCAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTCCTGCAGATCCATATGTAGAACTTTTCAGCTTCTTCTCAAGG  300

seq1  GCCATGTCTACCTTTGTTCTGCCGTGCTTACTGTCATGACAAATGGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTCTACCTTTGTTCTGCCGTGCTTACTGTCATGACAAATGGATTA  350

seq1  AACTTTTGAAGCTGTTAGCAAGCCTCATTTAAATGTGTTCCTTTATAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTGAAGCTGTTAGCAAGCCTCATTTAAATGTGTTCCTTTATAAGA  400

seq1  GGAGATGTTTTGGTCATAGTGTCTCTTCACAGCAATAGAAGACCAAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGTTTTGGTCATAGTGTCTCTTCACAGCAATAGAAGACCAAGACA  450

seq1  CCCCTTCTCTATGATATTCTTTGAACCTTAGAAGTGCTGTATAAATGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTCTATGATATTCTTTGAACCTTAGAAGTGCTGTATAAATGTCC  500

seq1  TTACCTTACTTTCACACTCAAAGCCTGCAATCTCAGGCCCCTTTAGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTACTTTCACACTCAAAGCCTGCAATCTCAGGCCCCTTTAGGTAG  550

seq1  AGCCCACATCTATTTTACCTCTAGAACTTCATTCCCAACATCTATGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACATCTATTTTACCTCTAGAACTTCATTCCCAACATCTATGGTCC  600

seq1  TGTACTGAGTTCCTCTCCCTTCATGGGTCAGGGGATACAGCCCACCAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGAGTTCCTCTCCCTTCATGGGTCAGGGGATACAGCCCACCAAAC  650

seq1  ATTGCAACACACCTCAGTCTATGCAGTTGAGTTTAGAGGAACTTCTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAACACACCTCAGTCTATGCAGTTGAGTTTAGAGGAACTTCTGAAC  700

seq1  TGGAATCACATTAGCTGTCCCATTCATAAGTCAGCACCAAGAAGCTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCACATTAGCTGTCCCATTCATAAGTCAGCACCAAGAAGCTGTAA  750

seq1  GAATGAGCTACAAGCATCTTGTAGCTGTCGCAAAAGCAGCTAAGCCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGCTACAAGCATCTTGTAGCTGTCGCAAAAGCAGCTAAGCCAGAG  800

seq1  TAACAGCAAATTCAGATCTAAATGCTCTCTTGACACAGTGGGGTGGGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCAAATTCAGATCTAAATGCTCTCTTGACACAGTGGGGTGGGGAC  850

seq1  ACATACTAAACTAGGAAAACAATAAACTAACTCCAGATGCCCAGATCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTAAACTAGGAAAACAATAAACTAACTCCAGATGCCCAGATCCAA  900

seq1  TTACAAAATACACAAGCAGTTTGAAATACAGGGACAATGTGCCCACTCCC  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTACAAAATACAC-AGCAGTTTGAAATACAGGGACAATGTGCCCACTCCC  949

seq1  CAAGTCACTAATTCCATAGTTATGGTACATAGTGAGAACAGTTAAAGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCACTAATTCCATAGTTATGGTACATAGTGAGAACAGTTAAAGAAA  999

seq1  ACTAAGACACAAAGTTCAAAAGAAAAAAAAAACAGAATTTTTCAAAGAGT  1050
      |||||||||||||||      ||  ||| |||||||  ||||| ||||| 
seq2  ACTAAGACACAAAGT-----CGAGGAAAGAAACAGA--TTTTC-AAGAG-  1040

seq1  TCGGAACGCGAGAAAACACGAGAG-TGAGCTTTAAAAAGATAAGGATGAA  1099
      |||| ||||||||||||||||||| ||||| || ||||||||  ||||||
seq2  TCGG-ACGCGAGAAAACACGAGAGTTGAGCCTT-AAAAGATA--GATGAA  1086

seq1  GTCCCGATTGA  1110
      ||| |||||||
seq2  GTCTCGATTGA  1097


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