BAC Information

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BAC

Clone NameB6Ng01-201E13
Chromosome9 (Build37)
Map Location 26,108,214 - 26,109,293
singlet/doubletsinglet
Overlap genenone
Upstream geneSept7, EG666327, 2310005P05Rik
Downstream geneB3gat1, BC038479, Glb1l3, Gm1110, LOC330907, Acad8, Thyn1, Vps26b, Ncapd3, Jam3, Igsf9b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201E13.bB6Ng01-201E13.g
ACCGA022103GA022104
length1,0761,215
definitionB6Ng01-201E13.b B6Ng01-201E13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaacaaaaactcaaagaaggcaggagcctgaagacaggaatta
atgcagataccatgaggattttgcttttgatggcttgctcagtctatttt
cttatagagcttaggaccaccaatacagggatagaagcactcacaatggg
attgatccaccatcaatcactaatttaaaaaaatgccctaaagcaggaat
ttatgagggtactttctgtttgaagttctcaactatgactttagcttgtg
ttagcatgacataacactatccaaccatactattaagtattttctactaa
aatggacagttgtactctaacagcctttcttagaggaatggatatttgct
ttactataaattataagattccactgaagtgtgctggaggctcaagggag
ggcataagctcatgttcttgagaatctttagaagcactgggaggtaccaa
gtaataagagtgatattaattctctcagatacaagaggcctctgagatat
gggaaatccaagatgtctctaacttctccttttgtgacattatttcacct
gcaaagagaaatttgtcctggtggagctccatgaaagcctggccaaaaca
gagttcatatcatttctcctatagaaaatatttaactggataatggtatt
atacttgaactgacatcttctggtcatctctctgtctcccacttagtgtt
gaggctagaccatgttactgtaaagatgtacttgttcctaagtttatcta
ggtcaatttttcctctagttacaacttctacatttgagaaagaggccagg
tggaacatatagtgatttccctatgatgacctatagtggaaaggaaagga
aaagaaaaattactatgaatttgaccttccccaacaatattccactgaga
gagaagagtagaatggatttgaagaacctcaggaggcattagaagagata
cttggcatctttaggctttacgaaaacatagtgcttcttttaaaggggtg
tctacataatttatgtcctatctgtatttgaaatactcctgactgtgaac
agaagctttcatctccttcagtggag
gaattcaatgaaaacgaaggcacaacatacccaaattcatgggacacaat
gaaaacagtgctaagaggaaagttcatagcactaagtgcctccataaaga
aattagagtttacataccagcaatttaaaagtagacctaaaacctctaga
aaaaaagacctgcaaacacatgcaagaggagtagaagacaggaaataatc
aaactcagggccaaaatcaatcaattaggacccctaaagaaatagaagta
gaattcaatgcaatccccatcaaaattccaactcaattcttcaacaaatt
agagagggcaatctgcaaattcatctgtaataacaaaaaacctaggatag
caaaaactcttctcaaggataaaagaacctctggtggaatcaccatgcct
gacctaaagcagtactacagagcaattgtgataaaaatttatatgataag
aatgtcaagtctatgaaaaaagaaattgaagaagatatcagaagatgaaa
agatttcccatgctcatggattgggaggattaatgtagagaaaatggcca
tataaccaaaagcagtctacagattcaatacaatagccatcaaaattcca
acagaaatcttacagaccttgaaagagaaattcttagcttcatatggaaa
aaaaaaatccccaaaacccaatgtagttaaaaccatcctatacaataaaa
gaactactggaagtatcatcattcctgacttcaagctgtgctacagagca
gtagtaataaaaactgcatgttattgatatagaaacagatatgttgatca
atggaattgaatggaagacccagatataaacccataaaactacagacatt
tgatttttggcacagaagccaaaatcatataatggaaaaggaagagcatg
ttccacaaatggtgctggcataattagatgcctgcatgtaaaagaatgca
aattgattcattatttatcactctgcacaaactcaagtccaagtagatca
aagacctcaatgtaaaaccagaaaacagcaaatctaataaaaacaaagag
tagggaatacttgaactcatagtatcttgaagcacttctaacagaaacac
tgataggtgcagaactaatcaccatcataatggactcatgaactgaatgc
ttccttaggcaagtacctatcaaatagggacaaaattacacaggctctct
acacgaaatatttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_26108214_26109293
seq2: B6Ng01-201E13.b_45_1120

seq1  GAATTCAGAACAAAAACTCAAAGAAGGCAGGAGCCTGAAGACAGGAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACAAAAACTCAAAGAAGGCAGGAGCCTGAAGACAGGAATTA  50

seq1  ATGCAGATACCATGAGGATTTTGCTTTTGATGGCTTGCTCAGTCTATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGATACCATGAGGATTTTGCTTTTGATGGCTTGCTCAGTCTATTTT  100

seq1  CTTATAGAGCTTAGGACCACCAATACAGGGATAGAAGCACTCACAATGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAGCTTAGGACCACCAATACAGGGATAGAAGCACTCACAATGGG  150

seq1  ATTGATCCACCATCAATCACTAATTTAAAAAAATGCCCTAAAGCAGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCCACCATCAATCACTAATTTAAAAAAATGCCCTAAAGCAGGAAT  200

seq1  TTATGAGGGTACTTTCTGTTTGAAGTTCTCAACTATGACTTTAGCTTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGGGTACTTTCTGTTTGAAGTTCTCAACTATGACTTTAGCTTGTG  250

seq1  TTAGCATGACATAACACTATCCAACCATACTATTAAGTATTTTCTACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATGACATAACACTATCCAACCATACTATTAAGTATTTTCTACTAA  300

seq1  AATGGACAGTTGTACTCTAACAGCCTTTCTTAGAGGAATGGATATTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACAGTTGTACTCTAACAGCCTTTCTTAGAGGAATGGATATTTGCT  350

seq1  TTACTATAAATTATAAGATTCCACTGAAGTGTGCTGGAGGCTCAAGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATAAATTATAAGATTCCACTGAAGTGTGCTGGAGGCTCAAGGGAG  400

seq1  GGCATAAGCTCATGTTCTTGAGAATCTTTAGAAGCACTGGGAGGTACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAGCTCATGTTCTTGAGAATCTTTAGAAGCACTGGGAGGTACCAA  450

seq1  GTAATAAGAGTGATATTAATTCTCTCAGATACAAGAGGCCTCTGAGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAGAGTGATATTAATTCTCTCAGATACAAGAGGCCTCTGAGATAT  500

seq1  GGGAAATCCAAGATGTCTCTAACTTCTCCTTTTGTGACATTATTTCACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATCCAAGATGTCTCTAACTTCTCCTTTTGTGACATTATTTCACCT  550

seq1  GCAAAGAGAAATTTGTCCTGGTGGAGCTCCATGAAAGCCTGGCCAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAGAAATTTGTCCTGGTGGAGCTCCATGAAAGCCTGGCCAAAACA  600

seq1  GAGTTCATATCATTTCTCCTATAGAAAATATTTAACTGGATAATGGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCATATCATTTCTCCTATAGAAAATATTTAACTGGATAATGGTATT  650

seq1  ATACTTGAACTGACATCTTCTGGTCATCTCTCTGTCTCCCACTTAGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGAACTGACATCTTCTGGTCATCTCTCTGTCTCCCACTTAGTGTT  700

seq1  GAGGCTAGACCATGTTACTGTAAAGATGTACTTGTTCCTAAGTTTATCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTAGACCATGTTACTGTAAAGATGTACTTGTTCCTAAGTTTATCTA  750

seq1  GGTCAATTTTTCCTCTAGTTACAACTTCTACATTTGAGAAAGAGGCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATTTTTCCTCTAGTTACAACTTCTACATTTGAGAAAGAGGCCAGG  800

seq1  TGGAACATATAGTGATTTCCCTATGATGACCTATAGTGGAAAGGAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATATAGTGATTTCCCTATGATGACCTATAGTGGAAAGGAAAGGA  850

seq1  AAAGAAAAATTACTATGAATTTGACCTTCCCCAACAATATTCCACTGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATTACTATGAATTTGACCTTCCCCAACAATATTCCACTGAGA  900

seq1  GAGAAGAGTAGAATGGATTTGAAGAACCTCAGGAGGCATTAGAAGAGATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGTAGAATGGATTTGAAGAACCTCAGGAGGCATTAGAAGAGATA  950

seq1  CTTGGCATCTTTA-GCTTTACGAAAACATTAGTGCTTCTTTTAAAGGGGT  999
      ||||||||||||| |||||||||||||| |||||||||||||||||||| 
seq2  CTTGGCATCTTTAGGCTTTACGAAAACA-TAGTGCTTCTTTTAAAGGGG-  998

seq1  TGTCTACATAATTTATGTCCTATCTGTATTTGAAATACTCCTGACTGTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACATAATTTATGTCCTATCTGTATTTGAAATACTCCTGACTGTGA  1048

seq1  ACAGAAGCTTTTCATCTCCTTTCAGTTGGAG  1080
      |||||||| |||||||||| ||||| |||||
seq2  ACAGAAGC-TTTCATCTCC-TTCAG-TGGAG  1076