BAC Information

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BAC

Clone NameB6Ng01-203A15
Chromosome9 (Build37)
Map Location 114,274,434 - 114,433,032
singlet/doubletdoublet
Overlap gene4930520O04Rik, Crtap, Glb1, Ccr4, Trim71
Upstream geneLOC100043802, LOC636680, Pdcd6ip, Clasp2, Ubp1, Fbxl2, Susd5, EG665719, 4921528I07Rik, Bcl2a1c
Downstream geneLOC100043808, Cnot10, LOC665772, Dync1li1, Cmtm6, Cmtm7, Cmtm8, Gpd1l, LOC100043813, Osbpl10, LOC100043812, Stt3b, LOC100039567, LOC670467, EG546164
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203A15.bB6Ng01-203A15.g
ACCGA023365GA023366
length1,117521
definitionB6Ng01-203A15.b B6Ng01-203A15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,431,917 - 114,433,032)(114,274,434 - 114,274,960)
sequence
gaattccaggcaagccttggccacatgaggtccggtctcaagacaaaaaa
caaaaggcctgtgtagtgccctgtcttaagttattgtgtctccatagttc
tgcttcgtgacaacacgatttcgcttccacagatctcgtgcccagtgtct
tctcttgtactgttaaaaagttaggattctctaaaaactgttttgccctg
tcttctggttaactgtgtccctggccactgcctctgacctgaggcaagga
gagctgcagtcacctgtcccacttcctagatctttgtatcttaaattccc
tcttcctccccctggtgttttgtttttaattgagacgggatcttcttctt
ttttctttttttgttcttttagagatttatttatttataccagaaaaggg
catctgatcccattacgaggagttgtgagccgccatgtggttgctgggaa
ttgaactcaggatctctggaagagcctaccctacagtgctcttaaccgct
gagccatctctccaaccccaagacaggacctttctattgactcttgacta
ttctggaacttgatttatagacctggctgacctcatcttcacagggatcc
tcctgtctctgctgtttaaggaggtgcttcaagtgggtggttaaataagg
agatctcacgtgctttcggctaaggaagaggagagggataggagattttt
gctcaggctaagcagaaaccccaggtgtagaccatggaggccaaatatta
gttggtgatcagtatccagtgttggtctggagatcgtgaggcatgctggg
tagaggagcagggtaccaggtgggtgcctgcactgggatggaggcatatt
atgctaatggatacacctgcacaggaacacccccccccccacccccccaa
tgtgagcatgccccctaactgggctctgagtgcttcttcccttgagagcc
aacgtgggttggggcagctaaaagatgagatagctggctttcttgaagca
atgactgctctaaatctattggttatttgccgccatgaacccacgaaaaa
tgattgttccctcagaacgaaggttgggtgggcctatttttacagcatac
aatgtttgcacctgggc
cacagagaaaaccaattttcaaaaagcaacacaattggaataccattaga
cctgcatttctatagaagatgaacaaaggcattcttacggattctctgga
ttctggaacacggataccatgtgggaaatctaggataaaacagaatatct
gtcaggttgttaataactagcgattataaaagccccagggaacattctca
atttgcacatgggtatatggagatagcttggactgctttgagtccattct
ccagtgtagaaggatgttccaaagcaaaactacatcatcctctttttctt
gatctcagagttctgtgagtcactggggccgccattctcttccctgccag
ggtccactctgcctcttttctgttcctgctctacatcatcactgcctacc
atgacgtcagcaacagcaggctttgatgacatggttatgaggctggagtc
acagtaattttgagacactagttagctcagatctccatgaaattactatg
acggggtggggggagggtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_114431917_114433032
seq2: B6Ng01-203A15.b_44_1160 (reverse)

seq1  GCCCAGGTGCAAACATTTGTATGCTGTAAAAACTGGGCCACACCAACCTT  50
      ||||||||||||||| ||||||||||||||||  || |||| ||||||||
seq2  GCCCAGGTGCAAACA-TTGTATGCTGTAAAAATAGGCCCAC-CCAACCTT  48

seq1  CGCTCCTGGGGGACAATCATTTTCTGT-GGTTCAT-GCGGGAAATAAACA  98
      || ||   ||| |||||||||||  || ||||||| |||| |||||| ||
seq2  CGTTCTGAGGGAACAATCATTTTTCGTGGGTTCATGGCGGCAAATAACCA  98

seq1  ATAGATTT--AGCAGTCATGGCTTCAGGAAAGCCAGCTGACCTCATCTTT  146
      ||||||||  ||||||||| |||||| ||||||||||| | |||||||||
seq2  ATAGATTTAGAGCAGTCATTGCTTCAAGAAAGCCAGCT-ATCTCATCTTT  147

seq1  TAGCTGCCCCAACCCCACGTTGGCTCCTCAGGGAAGAAGCACTCAGAGCC  196
      |||||||||||| |||||||||||||   |||||||||||||||||||||
seq2  TAGCTGCCCCAA-CCCACGTTGGCTCTCAAGGGAAGAAGCACTCAGAGCC  196

seq1  CAGTTAGGGGGCATGCTCACATTGGGGGGG-GGGGGGGGGGGTGTTCCTG  245
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGTTAGGGGGCATGCTCACATTGGGGGGGTGGGGGGGGGGGTGTTCCTG  246

seq1  TGCAGGTGTATCCATTAGCATAATATGCCTCCATCCCAGTGCAGGCACCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGTATCCATTAGCATAATATGCCTCCATCCCAGTGCAGGCACCC  296

seq1  ACCTGGTACCCTGCTCCTCTACCCAGCATGCCTCACGATCTCCAGACCAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTACCCTGCTCCTCTACCCAGCATGCCTCACGATCTCCAGACCAA  346

seq1  CACTGGATACTGATCACCAACTAATATTTGGCCTCCATGGTCTACACCTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGATACTGATCACCAACTAATATTTGGCCTCCATGGTCTACACCTG  396

seq1  GGGTTTCTGCTTAGCCTGAGCAAAAATCTCCTATCCCTCTCCTCTTCCTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTGCTTAGCCTGAGCAAAAATCTCCTATCCCTCTCCTCTTCCTT  446

seq1  AGCCGAAAGCACGTGAGATCTCCTTATTTAACCACCCACTTGAAGCACCT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGAAAGCACGTGAGATCTCCTTATTTAACCACCCACTTGAAGCACCT  496

seq1  CCTTAAACAGCAGAGACAGGAGGATCCCTGTGAAGATGAGGTCAGCCAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAACAGCAGAGACAGGAGGATCCCTGTGAAGATGAGGTCAGCCAGG  546

seq1  TCTATAAATCAAGTTCCAGAATAGTCAAGAGTCAATAGAAAGGTCCTGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAATCAAGTTCCAGAATAGTCAAGAGTCAATAGAAAGGTCCTGTC  596

seq1  TTGGGGTTGGAGAGATGGCTCAGCGGTTAAGAGCACTGTAGGGTAGGCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTGGAGAGATGGCTCAGCGGTTAAGAGCACTGTAGGGTAGGCTC  646

seq1  TTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACATGGCGGCTCACAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACATGGCGGCTCACAAC  696

seq1  TCCTCGTAATGGGATCAGATGCCCTTTTCTGGTATAAATAAATAAATCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGTAATGGGATCAGATGCCCTTTTCTGGTATAAATAAATAAATCTC  746

seq1  TAAAAGAACAAAAAAAGAAAAAAGAAGAAGATCCCGTCTCAATTAAAAAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAACAAAAAAAGAAAAAAGAAGAAGATCCCGTCTCAATTAAAAAC  796

seq1  AAAACACCAGGGGGAGGAAGAGGGAATTTAAGATACAAAGATCTAGGAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCAGGGGGAGGAAGAGGGAATTTAAGATACAAAGATCTAGGAAG  846

seq1  TGGGACAGGTGACTGCAGCTCTCCTTGCCTCAGGTCAGAGGCAGTGGCCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGGTGACTGCAGCTCTCCTTGCCTCAGGTCAGAGGCAGTGGCCA  896

seq1  GGGACACAGTTAACCAGAAGACAGGGCAAAACAGTTTTTAGAGAATCCTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACAGTTAACCAGAAGACAGGGCAAAACAGTTTTTAGAGAATCCTA  946

seq1  ACTTTTTAACAGTACAAGAGAAGACACTGGGCACGAGATCTGTGGAAGCG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTAACAGTACAAGAGAAGACACTGGGCACGAGATCTGTGGAAGCG  996

seq1  AAATCGTGTTGTCACGAAGCAGAACTATGGAGACACAATAACTTAAGACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGTGTTGTCACGAAGCAGAACTATGGAGACACAATAACTTAAGACA  1046

seq1  GGGCACTACACAGGCCTTTTGTTTTTTGTCTTGAGACCGGACCTCATGTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTACACAGGCCTTTTGTTTTTTGTCTTGAGACCGGACCTCATGTG  1096

seq1  GCCAAGGCTTGCCTGGAATTC  1116
      |||||||||||||||||||||
seq2  GCCAAGGCTTGCCTGGAATTC  1117

seq1: chr9_114274434_114274960
seq2: B6Ng01-203A15.g_65_591

seq1  GAATTCCACAGAGAAAACCAATTTTCAAAAAGCAACACAATTGGAATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGAGAAAACCAATTTTCAAAAAGCAACACAATTGGAATACC  50

seq1  ATTAGACCTGCATTTCTATAGAAGATGAACAAAGGCATTCTTACGGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACCTGCATTTCTATAGAAGATGAACAAAGGCATTCTTACGGATTC  100

seq1  TCTGGATTCTGGAACACGGATACCATGTGGGAAATCTAGGATAAAACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTCTGGAACACGGATACCATGTGGGAAATCTAGGATAAAACAGA  150

seq1  ATATCTGTCAGGTTGTTAATAACTAGCGATTATAAAAGCCCCAGGGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTCAGGTTGTTAATAACTAGCGATTATAAAAGCCCCAGGGAACA  200

seq1  TTCTCAATTTGCACATGGGTATATGGAGATAGCTTGGACTGCTTTGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATTTGCACATGGGTATATGGAGATAGCTTGGACTGCTTTGAGTC  250

seq1  CATTCTCCAGTGTAGAAGGATGTTCCAAAGCAAAACTACATCATCCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCAGTGTAGAAGGATGTTCCAAAGCAAAACTACATCATCCTCTT  300

seq1  TTTCTTGATCTCAGAGTTCTGTGAGTCACTGGGGCCGCCATTCTCTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGATCTCAGAGTTCTGTGAGTCACTGGGGCCGCCATTCTCTTCCC  350

seq1  TGCCAGGGTCCACTCTGCCTCTTTTCTGTTCCTGCTCTACATCATCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGGTCCACTCTGCCTCTTTTCTGTTCCTGCTCTACATCATCACTG  400

seq1  CCTACCATGACGTCAGCAACAGCAGGCTTTGATGACATGGTTATGAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCATGACGTCAGCAACAGCAGGCTTTGATGACATGGTTATGAGGCT  450

seq1  GGAGTCACAGTAATTTTGAGACACTAGTTAGCTCAGATCTCCATGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCACAGTAATTTTGAGACACTAGTTAGCTCAGATCTCCATGAAATT  500

seq1  ACTATGACGGGGTGGGGGGAGGGTATA  527
      |||||||||||||||||||||||||||
seq2  ACTATGACGGGGTGGGGGGAGGGTATA  527