BAC Information

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BAC

Clone NameB6Ng01-203J18
Chromosome9 (Build37)
Map Location 78,434,841 - 78,435,190
singlet/doubletsinglet
Overlap geneSlc17a5
Upstream geneKlhl31, Gclc, LOC100042212, Elovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1
Downstream geneCd109, LOC384957, EG666456, LOC436085, LOC235509, LOC666479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203J18.bB6Ng01-203J18.g
ACCGA023777GA023778
length3501,187
definitionB6Ng01-203J18.b B6Ng01-203J18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tttggtaatgtcaacaaaagacataccgacagaagactgttccgggccaa
caaaggcaaatttccagttcaattctttctcacacctatatccttgaatg
tgtccaagccgatttgtcctttagttttctgtagcttcaggaagctacat
tacaaaagtgtagcgaaatccagtgaagacacatacttgtgttttggggg
atggtgggtatggagactagaaccttgtcaggcaaggactatacctctgt
gcaacatgcgccccccccccccccccccgcaatgaagatgctttttgaag
tagcacctgcaagacctctagtacggcatattgtcttaaattgctaaata

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacatcagtcagaatggctaagatcaaaaattcaggtgatagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaataatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcctgagtgaggtaacccaatcacaaagga
actcgcacaatatgtactcactgatgagtggatattagcccagaaactta
ggatacccaagatataagatacaatttgcaaaacgcatgaaactcaagaa
gaacgaagaccaaagtgtggacactttgccccttcctagaaatgggaaca
aaacacccatggaaggagttacagagacaaagtttggagctgtgacgaaa
ggatggaccatatagtgattgccatatccagggatccatcccataatcag
cttccaatcgctgacaccattgcatacactagcaagattatgctgtaagg
acccagatatagctgtctcttgtgggactatgccggggcctagcaaacac
ataagtggatgctcacagtcagctattggatgggtcacacggtcccccaa
tggaggagctaggagaaattacctaaggagctaaagggaactgcaaccta
ttaggtggaacaacaatatgaactaccagtactccggagctcttgctcta
gctgcatatgtaatcaaagatgccttagtcaggccatcactgggaagagt
agtccttgacttgctacttaatatgccaagtaaggtacgctaggtcaaaa
gtgggatcgtgctggtacatggatctgttactgcgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_78434841_78435190
seq2: B6Ng01-203J18.b_50_399

seq1  TTTGGTAATGTCAACAAAAGACATACCGACAGAAGACTGTTCCGGGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAATGTCAACAAAAGACATACCGACAGAAGACTGTTCCGGGCCAA  50

seq1  CAAAGGCAAATTTCCAGTTCAATTCTTTCTCACACCTATATCCTTGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCAAATTTCCAGTTCAATTCTTTCTCACACCTATATCCTTGAATG  100

seq1  TGTCCAAGCCGATTTGTCCTTTAGTTTTCTGTAGCTTCAGGAAGCTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAGCCGATTTGTCCTTTAGTTTTCTGTAGCTTCAGGAAGCTACAT  150

seq1  TACAAAAGTGTAGCGAAATCCAGTGAAGACACATACTTGTGTTTTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGTGTAGCGAAATCCAGTGAAGACACATACTTGTGTTTTGGGGG  200

seq1  ATGGTGGGTATGGAGACTAGAACCTTGTCAGGCAAGGACTATACCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGGTATGGAGACTAGAACCTTGTCAGGCAAGGACTATACCTCTGT  250

seq1  GCAACATGCGCCCCCCCCCCCCCCCCCCGCAATGAAGATGCTTTTTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATGCGCCCCCCCCCCCCCCCCCCGCAATGAAGATGCTTTTTGAAG  300

seq1  TAGCACCTGCAAGACCTCTAGTACGGCATATTGTCTTAGAGTGCTAAAGA  350
      |||||||||||||||||||||||||||||||||||||| | ||||||| |
seq2  TAGCACCTGCAAGACCTCTAGTACGGCATATTGTCTTAAATTGCTAAATA  350