BAC Information

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BAC

Clone NameB6Ng01-204O02
Chromosome9 (Build37)
Map Location 51,255,950 - 51,256,801
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672372, 1600029D21Rik, Pts, Bcdo2, Tex12, Il18, Sdhd, Timm8b, AU019823, Pih1d2, Dlat, Dixdc1, 2310030G06Rik, Hspb2, Cryab, 1110032A03Rik, D630004A14Rik, Alg9, Ppp2r1b, Snf1lk2, Layn, 4833427G06Rik, Btg4, LOC100042825, Pou2af1, Gm684, 1810046K07Rik, LOC100042854
Downstream geneLOC640374, LOC668070, Arhgap20, LOC629554, LOC100043409, Fdx1, EG629557, Rdx, 9830163H01Rik, Zc3h12c, LOC100042876
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204O02.bB6Ng01-204O02.g
ACCGA024704GA024705
length1,0331,196
definitionB6Ng01-204O02.b B6Ng01-204O02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaacagccattagttgagttgtccctgcacatattcctttcc
tcattccctctttcctccacctccatgtttgatcttcccattccagtctc
cttaccactgtccatccataactatctattccctcttctatggaactgtg
tacctccccacccccatccccagtcccttactctctgcctaacctctgtg
gtcatatggattgtgcttgcttgtcaattacttaatagacaacatcacat
ataaacaaatacatataatgtttgtctttatgggccagagttaccttatt
catgatttttttctattttcattccagggtgcttttttccccctagttac
agtcattgaacatggagaagttgaactggtgcttacctagtgcctgtgcc
ccttattagactaatattcatgatactagtctataatagtacctgcgtgc
tacatactctgcatattacaaaagaagataggtaaacactaacctagcta
caaaccctctgatctatgagggtgacctgtttgccagatatgctggtgca
ataatggcacaaagcttttggaagtaaccaatcaatatctgatttaagtt
aaggtccattccatgagatggaacaaacactgcttgtgtggccaagaacc
tgagactaaatagttcaagagcctatgggaaaaccaaaccctactgttct
gctaaaggaacgtaacaataaagtgactcctaaggacctttttctatact
catagatccatgctttcctaagctgttgttagaaaaacttcctcctacag
cagatgggaacaaatacagagacccaccctcccaaaaactatgcaaagcc
agagacctcaaaacactctgctctaaaatggatgtctccatcaaattcat
cctctcaaaagaagagaggatgaaaaaggagtataagagtcagagggaat
ggaagacaccaagcttcagtgccctgtggactcatatgaactcatagaga
ctgtcagatgctcagggccgctgcaccagatgg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaagggctccc
aatggaggagctagagaaagtacccaagagctaagggatcttcaacccta
taggtggaacaacatattgaactaaccagtacccctgagctcttgactct
agctgcatatgtatcaaagatgcctagtccgtcattacttggaaagaagt
catgatcacgcggaactttgtggttcctgtacggtgaagctcatgatcaa
atggcggtgttacgtcgctgcgactgacgacacttcagatcagcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_51255950_51256801
seq2: B6Ng01-204O02.b_47_898

seq1  GAATTCTCAAACAGCCATTAGTTGAGTTGTCCCTGCACATATTCCTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAACAGCCATTAGTTGAGTTGTCCCTGCACATATTCCTTTCC  50

seq1  TCATTCCCTCTTTCCTCCACCTCCATGTTTGATCTTCCCATTCCAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCCTCTTTCCTCCACCTCCATGTTTGATCTTCCCATTCCAGTCTC  100

seq1  CTTACCACTGTCCATCCATAACTATCTATTCCCTCTTCTATGGAACTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCACTGTCCATCCATAACTATCTATTCCCTCTTCTATGGAACTGTG  150

seq1  TACCTCCCCACCCCCATCCCCAGTCCCTTACTCTCTGCCTAACCTCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCCACCCCCATCCCCAGTCCCTTACTCTCTGCCTAACCTCTGTG  200

seq1  GTCATATGGATTGTGCTTGCTTGTCAATTACTTAATAGACAACATCACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATGGATTGTGCTTGCTTGTCAATTACTTAATAGACAACATCACAT  250

seq1  ATAAACAAATACATATAATGTTTGTCTTTATGGGCCAGAGTTACCTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAATACATATAATGTTTGTCTTTATGGGCCAGAGTTACCTTATT  300

seq1  CATGATTTTTTTCTATTTTCATTCCAGGGTGCTTTTTTCCCCCTAGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTTTTTCTATTTTCATTCCAGGGTGCTTTTTTCCCCCTAGTTAC  350

seq1  AGTCATTGAACATGGAGAAGTTGAACTGGTGCTTACCTAGTGCCTGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTGAACATGGAGAAGTTGAACTGGTGCTTACCTAGTGCCTGTGCC  400

seq1  CCTTATTAGACTAATATTCATGATACTAGTCTATAATAGTACCTGCGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTAGACTAATATTCATGATACTAGTCTATAATAGTACCTGCGTGC  450

seq1  TACATACTCTGCATATTACAAAAGAAGATAGGTAAACACTAACCTAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACTCTGCATATTACAAAAGAAGATAGGTAAACACTAACCTAGCTA  500

seq1  CAAACCCTCTGATCTATGAGGGTGACCTGTTTGCCAGATATGCTGGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTCTGATCTATGAGGGTGACCTGTTTGCCAGATATGCTGGTGCA  550

seq1  ATAATGGCACAAAGCTTTTGGAAGTAACCAATCAATATCTGATTTAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGCACAAAGCTTTTGGAAGTAACCAATCAATATCTGATTTAAGTT  600

seq1  AAGGTCCATTCCATGAGATGGAACAAACACTGCTTGTGTGGCCAAGAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCATTCCATGAGATGGAACAAACACTGCTTGTGTGGCCAAGAACC  650

seq1  TGAGACTAAATAGTTCAAGAGCCTATGGGAAAACCAAACCCTACTGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTAAATAGTTCAAGAGCCTATGGGAAAACCAAACCCTACTGTTCT  700

seq1  GCTAAAGGAACGTAACAATAAAGTGACTCCTAAGGACCTTTTTCTATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGGAACGTAACAATAAAGTGACTCCTAAGGACCTTTTTCTATACT  750

seq1  CATAGATCCATGCTTTCCTAAGCTGTTGTTAGAAAAACTTCCTCCTACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATCCATGCTTTCCTAAGCTGTTGTTAGAAAAACTTCCTCCTACAG  800

seq1  CAGATGGGAACAAATACAGAGACCCACCCTCCCAAAAACTATGCAAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGAACAAATACAGAGACCCACCCTCCCAAAAACTATGCAAAGCC  850

seq1  AG  852
      ||
seq2  AG  852