BAC Information

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BAC

Clone NameB6Ng01-206P14
Chromosome9 (Build37)
Map Location 9,181,301 - 9,182,377
singlet/doubletsinglet
Overlap gene9030420J04Rik
Upstream gene1700128F08Rik, Trpc6, Pgr
Downstream geneCntn5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206P14.bB6Ng01-206P14.g
ACCGA026248GA026249
length1,0691,075
definitionB6Ng01-206P14.b B6Ng01-206P14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattcctctgattaggacttcaagtacaatattgaataggtagagaaa
aagtggccagccttgtctagtctctgattttggtgggattgcttcaactt
tctctgcatttactttgatgttgggtactggtttactttatattgctttt
attatgtttaggtgtgggccttgaattcctgatctttccaggacttttat
catgaaggggtgttggattttgtcaaatgctttctcagcatctaacgaga
tgatcatgtgatttttgtccttgagtttggttatatagtggattacattg
atggatttccatatattaaaccatccctgcatccctgggatgaagcctac
ttggtcatgatggatgatcgttttgatgtgttcttggattctgtttgtga
ggattttattgagtatttttgcaacgatattcgtaagggaaattggtctg
aagttctatttctttgttaaatctttgtgtggtttaggtaacagagtaat
tgtggattcatagaatgagttgggtagagaaccttctttttctattttgt
ggaatagtttgaagagaattggaattaggtcttctttgaaggtctgatag
aactctgcactaaacccatctagtcctgggcctgttttgtttgggagact
attaatgactgctactatttctataggggaaacgtgattgttaagatcgt
taacctgatcctgatttaactatagtacctggcatctgtctaggaaactg
tccatttcatccagcttttttcagttttgttgagtatagccttttggagt
aggatctgataatgttttgaattttcctcagaatctaacgttgtgtctac
tttttaatttctgattttgttaataaggatactgtccctgtgccttatag
ttagtctggctaagggtttatctatctttgctgattttttccaaagaacc
agctcctggttggttgattccttgaatagttcttttgttccacttgggta
aattcctgccttagttggatattaaccgctgctcactcctacctgggtga
gaaattgagccttcctatc

gaattccttgcctgtcctcaagcacaaaggcccccaccatgcacatcact
ccttgtcaggtttccttaactaacaattcctcctaaatctgctcagagca
gacagtaaactctccactatttctgttagacctaagctcagtcccgtgtc
tactgtgatagtcctgacttctgctgtcctcagtcttccttacaggactt
aaacacttatgaaagcataaatacacaaggaaccattggcaaaaacactg
gagcatccttcaacacaagggattggcctccttgctgcattccccaaagg
cagttctgtggaacacagtccccaagtttcaaaaattggaaaattctatt
gacatcttgttttaaatgtattaggaagaagttttgtttggttgtttttt
ttttatttacaaaataaactatgtctttaaaagaggatatttctcacaga
ttgacatctcttcttattaaagagaaaaactctagggccagctcctaaat
cccacttctggatactttgaattcaagaagaaagatgaagagagcttcct
ggtgaactctaagtcagcaagaaaaacaagggctttatgggatagacttc
ccagttgcgtgcagtatgctcctctttccacaggctcatttttctgatct
gcacaacaaggtatttatacttcaggactgttgggaggagtagaggaggt
ttgtacctggtgcttcttagaaaagaaagtaagtagcacccattattatc
ttgattcctgcttacacaggtagtaaggctgatgggcttttcaaaaaagg
gggccatgaaaaaacaggcatttaccagggtgaccaggtctaattaaaca
gaataacagtaatagccatatcaaatagtgtgaagaacagagaaggcact
atgattctgattcctaggatgtgttaagccaagctgtctgtgaggacttc
tgctagaccagagggaaacgtacaattaacctcctctttactgttcccac
acagactataaagaggctcatgcttgctggcaggcacaagaggacaggga
tctcaatgatgtcctctcctcctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_9181301_9182377
seq2: B6Ng01-206P14.g_68_1142

seq1  GAATTCCTTGCCTGTCCTCAAGCACAAAGGCCCCCACCATGCACATCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCCTGTCCTCAAGCACAAAGGCCCCCACCATGCACATCACT  50

seq1  CCTTGTCAGGTTTCCTTAACTAACAATTCCTCCTAAATCTGCTCAGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCAGGTTTCCTTAACTAACAATTCCTCCTAAATCTGCTCAGAGCA  100

seq1  GACAGTAAACTCTCCACTATTTCTGTTAGACCTAAGCTCAGTCCCGTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTAAACTCTCCACTATTTCTGTTAGACCTAAGCTCAGTCCCGTGTC  150

seq1  TACTGTGATAGTCCTGACTTCTGCTGTCCTCAGTCTTCCTTACAGGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGATAGTCCTGACTTCTGCTGTCCTCAGTCTTCCTTACAGGACTT  200

seq1  AAACACTTATGAAAGCATAAATACACAAGGAACCATTGGCAAAAACACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTATGAAAGCATAAATACACAAGGAACCATTGGCAAAAACACTG  250

seq1  GAGCATCCTTCAACACAAGGGATTGGCCTCCTTGCTGCATTCCCCAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCCTTCAACACAAGGGATTGGCCTCCTTGCTGCATTCCCCAAAGG  300

seq1  CAGTTCTGTGGAACACAGTCCCCAAGTTTCAAAAATTGGAAAATTCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGTGGAACACAGTCCCCAAGTTTCAAAAATTGGAAAATTCTATT  350

seq1  GACATCTTGTTTTAAATGTATTAGGAAGAAGTTTTGTTTGGTTGTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTTGTTTTAAATGTATTAGGAAGAAGTTTTGTTTGGTTGTTTTTT  400

seq1  TTTTATTTACAAAATAAACTATGTCTTTAAAAGAGGATATTTCTCACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTACAAAATAAACTATGTCTTTAAAAGAGGATATTTCTCACAGA  450

seq1  TTGACATCTCTTCTTATTAAAGAGAAAAACTCTAGGGCCAGCTCCTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATCTCTTCTTATTAAAGAGAAAAACTCTAGGGCCAGCTCCTAAAT  500

seq1  CCCACTTCTGGATACTTTGAATTCAAGAAGAAAGATGAAGAGAGCTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCTGGATACTTTGAATTCAAGAAGAAAGATGAAGAGAGCTTCCT  550

seq1  GGTGAACTCTAAGTCAGCAAGAAAAACAAGGGCTTTATGGGATAGACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACTCTAAGTCAGCAAGAAAAACAAGGGCTTTATGGGATAGACTTC  600

seq1  CCAGTTGCGTGCAGTATGCTCCTCTTTCCACAGGCTCATTTTTCTGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCGTGCAGTATGCTCCTCTTTCCACAGGCTCATTTTTCTGATCT  650

seq1  GCACAACAAGGTATTTATACTTCAGGACTGTTGGGAGGAGTAGAGGAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAACAAGGTATTTATACTTCAGGACTGTTGGGAGGAGTAGAGGAGGT  700

seq1  TTGTACCTGGTGCTTCTTAGAAAAGAAAGTAAGTAGCACCCATTATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCTGGTGCTTCTTAGAAAAGAAAGTAAGTAGCACCCATTATTATC  750

seq1  TTGATTCCTGCTTACACAGGTAGTAAGGCTGATGGGCTTTTCAAAAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCCTGCTTACACAGGTAGTAAGGCTGATGGGCTTTTCAAAAAAGG  800

seq1  GGGCCATGAAAAAACAGGCATTTACCAGGGTGACCAGGTCTAATTAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATGAAAAAACAGGCATTTACCAGGGTGACCAGGTCTAATTAAACA  850

seq1  GAATAACAGTAATAGCCATATCAAATAGTGTGAAG-ACAGAGAAGGCACT  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAATAACAGTAATAGCCATATCAAATAGTGTGAAGAACAGAGAAGGCACT  900

seq1  ATGATTCTGATTCCTAGGATGTGTTAAGCCAAGCTGTCTGTGAGGACTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  ATGATTCTGATTCCTAGGATGTGTTAAGCCAAGCTGTCTGTGAGGACTTC  950

seq1  TGCTAAGACCAGAGGGAAACGTACAATTTAACCT-CTCTTTACTG-TCCC  997
      |||| ||||||||||||||||||||| ||||||| |||||||||| ||||
seq2  TGCT-AGACCAGAGGGAAACGTACAA-TTAACCTCCTCTTTACTGTTCCC  998

seq1  ACACAGACTATAAAGAAGGCTCATGCTTTGCTGGCA-GCACAAGAGACCA  1046
      ||||||||||||||| |||||||||| ||||||||| |||||||||  ||
seq2  ACACAGACTATAAAG-AGGCTCATGC-TTGCTGGCAGGCACAAGAGGACA  1046

seq1  GGGATTCTCCAATGAATGTCCT-TCCTTCTCC  1077
      |||| ||| ||||| ||||||| |||| ||||
seq2  GGGA-TCT-CAATG-ATGTCCTCTCCTCCTCC  1075


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