BAC Information

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BAC

Clone NameB6Ng01-208F07
Chromosome9 (Build37)
Map Location 74,069,902 - 74,227,869
singlet/doubletdoublet
Overlap geneNr1h2-ps
Upstream geneUnc13c, Wdr72
Downstream geneLOC100040764, Onecut1, BC031353, Arpp19, LOC100040812, Myo5a, LOC677501, Myo5c, Gnb5, Bcl2l10, LOC384954
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208F07.bB6Ng01-208F07.g
ACCGA027242GA027243
length1841,155
definitionB6Ng01-208F07.b B6Ng01-208F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,227,685 - 74,227,869)(74,069,902 - 74,071,068)
sequence
gaattcagaggtcagaggcctttgccgggatcagatggatgaagaatgaa
tggacacagatgaggcagggcccagcctggaggaaaattataaaatcaga
gctctaggagtcaagctgtaaatagtaattaattgattaatgtatgtgtt
ggtgcaagtaaggggtgcaagtgtgtgtgtgtgt
gaattcaatacagttgcaggatagaggataaacacaaatactgcaggtcc
tctatataacagtaatgaatttactgcagaggaaacaatgaaatcaatct
aattcgtgagcactgaagtattcttactactaattagttcattagagtaa
tatgttaataattgcaattcctggtaataaactaagtaaaagatatcaat
aataaaaattatgaaacactgattaaagaaagatatatattaaaacatgg
gaaggggctagtgagatggcttggcagttaagagcactagctgctctgcc
agaggtgcagtgttcaattcccagcaaccacatggtggctcacaaccatc
tgtaaggggatctgaagccctctctggcacacagtgtggtatgagacatt
aaagtcctcatctctgtggggacacagaaaagcagtgattgtcagagcat
gagtttttacggactcaagcaaggataattgtatgatctggggaaccatg
ttatactcaacatgaaactgtacacttcttaagccctttgcccaggagga
agactcaccccaccataaagtatgtgacatctggctccagttgtcacctt
caggatcaacaggatcaacccccaaacaagatcaaagtcacactccttgg
aacagtggataaacagggtgtcaaggctagtctgtgcatactgcaggcct
cccttaatggccatctttgccatagtttccatgaggccggtggatacctt
gttaggtctgtttgatgaagagagatcctgttgcacacagtccatgggtg
cccttcttctctgagagatgctactctccagtctacctttgttcttctaa
ctccacttctggaaagacccagcagataccagtggagaaaccatagggaa
tgtttcaagcacagtgatgaaggcaggccaccaaggcctgttcagcgttg
ggaaagtgtggcctagaacagagtgagaaaaccaggacctggtgggccaa
agcatcatctagagagactcagacattccacactaaagaaaacagaaaca
gagaaaccccattccagtatttgtcaattattcgtatgcttggcacctcc
ctgtaaggtatacttgttatctttttttcttctggtacaggcttggctct
tagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_74227685_74227869
seq2: B6Ng01-208F07.b_43_227 (reverse)

seq1  ACACACACACACACTTGCACCCCTTACTTGCACCAACACATACATTAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACTTGCACCCCTTACTTGCACCAACACATACATTAATC  50

seq1  AATTAATTACTATTTACAGCTTGACTCCTAGAGCTCTGATTTTATAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTACTATTTACAGCTTGACTCCTAGAGCTCTGATTTTATAATTT  100

seq1  TCCTCCAGGCTGGGCCCTGCCTCATCTGTGTCCATTCATTCTTCATCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGGCTGGGCCCTGCCTCATCTGTGTCCATTCATTCTTCATCCAT  150

seq1  CTGATCCCGGCAAAGGCCTCTGACCTCTGAATTCC  185
      |||||||||||||||||||||||||||||||||||
seq2  CTGATCCCGGCAAAGGCCTCTGACCTCTGAATTCC  185

seq1: chr9_74069902_74071068
seq2: B6Ng01-208F07.g_67_1221

seq1  GAATTCAATACAGTTGCAGGATAGAGGATAAACACAAATACTGCAGGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACAGTTGCAGGATAGAGGATAAACACAAATACTGCAGGTCC  50

seq1  TCTATATAACAGTAATGAATTTACTGCAGAGGAAACAATGAAATCAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAACAGTAATGAATTTACTGCAGAGGAAACAATGAAATCAATCT  100

seq1  AATTCGTGAGCACTGAAGTATTCTTACTACTAATTAGTTCATTAGAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGTGAGCACTGAAGTATTCTTACTACTAATTAGTTCATTAGAGTAA  150

seq1  TATGTTAATAATTGCAATTCCTGGTAATAAACTAAGTAAAAGATATCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAATAATTGCAATTCCTGGTAATAAACTAAGTAAAAGATATCAAT  200

seq1  AATAAAAATTATGAAACACTGATTAAAGAAAGATATATATTAAAACATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATTATGAAACACTGATTAAAGAAAGATATATATTAAAACATGG  250

seq1  GAAGGGGCTAGTGAGATGGCTTGGCAGTTAAGAGCACTAGCTGCTCTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGCTAGTGAGATGGCTTGGCAGTTAAGAGCACTAGCTGCTCTGCC  300

seq1  AGAGGTGCAGTGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGCAGTGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATC  350

seq1  TGTAAGGGGATCTGAAGCCCTCTCTGGCACACAGTGTGGTATGAGACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGGGATCTGAAGCCCTCTCTGGCACACAGTGTGGTATGAGACATT  400

seq1  AAAGTCCTCATCTCTGTGGGGACACAGAAAAGCAGTGATTGTCAGAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTCATCTCTGTGGGGACACAGAAAAGCAGTGATTGTCAGAGCAT  450

seq1  GAGTTTTTACGGACTCAAGCAAGGATAATTGTATGATCTGGGGAACCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTACGGACTCAAGCAAGGATAATTGTATGATCTGGGGAACCATG  500

seq1  TTATACTCAACATGAAACTGTACACTTCTTAAGCCCTTTGCCCAGGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTCAACATGAAACTGTACACTTCTTAAGCCCTTTGCCCAGGAGGA  550

seq1  AGACTCACCCCACCATAAAGTATGTGACATCTGGCTCCAGTTGTCACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACCCCACCATAAAGTATGTGACATCTGGCTCCAGTTGTCACCTT  600

seq1  CAGGATCAACAGGATCAACCCCCAAACAAGATCAAAGTCACACTCCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCAACAGGATCAACCCCCAAACAAGATCAAAGTCACACTCCTTGG  650

seq1  AACAGTGGATAAACAGGGTGTCAAGGCTAGTCTGTGCATACTGCAGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGGATAAACAGGGTGTCAAGGCTAGTCTGTGCATACTGCAGGCCT  700

seq1  CCCTTAATGGCCATCTTTGCCATAGTTTCCATGAGGCCGGTGGATACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAATGGCCATCTTTGCCATAGTTTCCATGAGGCCGGTGGATACCTT  750

seq1  GTTAGGTCTGTTTGATGAAGAGAGATCCTGTTGCACACAGTCCATGGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTCTGTTTGATGAAGAGAGATCCTGTTGCACACAGTCCATGGGTG  800

seq1  CCCTTCTTCTCTGAGAGATGCTACTCTCCAGTCTACCTTTGTTCTTCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTCTCTGAGAGATGCTACTCTCCAGTCTACCTTTGTTCTTCTAA  850

seq1  CTCCACTTCTGGAAAGACCCAGCAGATACCAGTGGAGAAACCATAGGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTCTGGAAAGACCCAGCAGATACCAGTGGAGAAACCATAGGGAA  900

seq1  TGTTTCAAGCACAGTGATGAAGGCAGGCCACCAAGGCCTGGTCAGCG-TG  949
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  TGTTTCAAGCACAGTGATGAAGGCAGGCCACCAAGGCCTGTTCAGCGTTG  950

seq1  GGAAAGTGTGG-CTAGAACAGAGTGGAGAAAAACAGGACCTGGTGGG-CA  997
      ||||||||||| |||||||||||| ||||||| |||||||||||||| ||
seq2  GGAAAGTGTGGCCTAGAACAGAGT-GAGAAAACCAGGACCTGGTGGGCCA  999

seq1  AAGCATCATCTAGAGAGAACTCAGACATTTCCAACACTAAAGAAACAGGA  1047
      ||||||||||||||||| |||||||||||  | ||||||||||||   ||
seq2  AAGCATCATCTAGAGAG-ACTCAGACATT--CCACACTAAAGAAAACAGA  1046

seq1  AACAGAGAAACCCCATTCCAGTATTTGTCAAATTATTCGTATGCTGGGCA  1097
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  AACAGAGAAACCCCATTCCAGTATTTGTC-AATTATTCGTATGCTTGGCA  1095

seq1  CCTTCCTTGTAAAGTTATACTTGTTTATCTTTTTTTCCTTTCTTTGTGAA  1147
      || ||| ||| ||| |||||||| |||||||||||||  ||| | ||   
seq2  CC-TCCCTGT-AAGGTATACTTG-TTATCTTTTTTTC--TTC-TGGT---  1136

seq1  CCCAGGCTTGGGCTC-TAGTT  1167
        ||||||| ||||| |||||
seq2  -ACAGGCTT-GGCTCTTAGTT  1155