BAC Information

Click to search

BAC

Clone NameB6Ng01-210I16
Chromosome9 (Build37)
Map Location 89,983,799 - 89,984,957
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666747, LOC100039714, 4930579C12Rik, Bcl2a1b, Mthfs, AF529169, Tmed3, B230218L05Rik, Rasgrf1, Ctsh
Downstream geneMorf4l1, LOC621414, Adamts7, Tbc1d2b, LOC100039777, LOC100039925
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210I16.bB6Ng01-210I16.g
ACCGA028855GA028856
length1,2151,153
definitionB6Ng01-210I16.b B6Ng01-210I16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaccaaccactaatagaaaatgttaggttaaaaattatatctg
tttgaacacatgcagatgctttttcttgtcattagttcctaaatgataca
ccatagctactactatttgtataacattcacatctgattaagtggcaaat
aaggccagtatggtggcatgtgtccataatcccagcacttgggaagttgg
ggcagtaggatcaggagttcaagaccagccttagctaggtggatcttgtc
tccaaaacaaaactattgtaagtagaaattatttaaggtatatgagcaga
agtggaattgtataggttatatatgtgcaaattatatatgcatattatat
tttgaatgatggacctcagcatccaagattttttgatactcgcaaggtat
cctaaggatactgaagagtggctatatttggcatatagtcagaagagaac
tacaaaggtacaagagccttggacctacagagtctctggcagtttgattt
aatcaggaacatgtgagtgctgatgctgaaggtccttgtcctcagttgct
tcttgatcaaccaataaagatgccagcagtcaaaggctgggccaaaagaa
agaagagagacttccggttcccataggctaggtaagaggaggagatcgag
atatttggaggggaaagacggaacaaggagctataggggagatcttccaa
aatgtaggcagaaaaggaaagcagcccatggaagtgtcttgggcagcaag
actaatgggcttcacagaaggtaaccaggcaactaagttgaggatagatc
taaagttgttgagctaaagataaaggtaaccaggcaactgcattgaaggc
agatttagaggtgttgagctaggagtaaagataagggcatgctggcctca
gaaggcttaagaagagcccagccgctgagccaatagacaggttaaaaatg
aactaatgtgtgtgtgtctttcatcctaaggatcagagattactcctggg
caggtacgccacctgcagcttcgcaggagctcaaagctgtgtagccaaaa
ctacacactacactgccagcccattgaccatgaactatcctccttgtatg
ctctggtctagggtccttgacaccctagaagaggtatccttctctctaga
ggaactcctatgtctttgtcaggtcaccaatgaaggtgtcttctactggg
agagaaccctcaacg
gaattccttgagcatcaaatttgggaccttttatttttcgggtaaggggg
ttcctttattccaaaccttttacctaacagtggagagaatcatttctgtc
ttctgattaaatatcttgaaactatatgtgatatttcattatctacattg
aaggcagatgaattttcattcaaatttgtcttctttttctgtccctgcat
atatgcccaaagttaaacttccttttacatttcttggtattttacagtgt
aaggtcttttggtttatgatctgttatacgggccaaagattaagtgtcta
gacttttaaatgtagatacatgcttatacacaacccctgggaagtacctt
atttcatatacatatactgtgttattcttcaatgtaccttgttcattcaa
caacacatgaaagctaactcaagaggggagacaaaaatcccaaaccaacc
aaaatactggctgaaataacagacaaggcaggcaggggacactgtattga
actttaaaaatggtgttaatatgagtaggcagtgggaaacctagcgacgg
ctcagcagttcagagcactcactggctgctctttcatttgccagcgccag
aagacagtaacagtacaacctgtacagctatgttcaacaaagactaatag
gacaaactttgttacatgcaagcaagataccaggtgtttatatagatgcc
acaaacacacaaggaagttaaatagccactttaagggttggttggttgtg
gttttttgtctcccagtagcatcactaaagcctacaaaactttatttctc
cataaacatgttcctttgttgctgtggcaaatccaactgcaaatttcaag
gcatacagttcagagggacggggaagcatggttcagctcatgttgggcag
gaaattgtgatgcaacctacttacatacatacaggcaagtcagaagcaca
ggagggatagtccattcagatgggcctacttcttccagacaggtctccta
agtgtgtacagctagagactcatgtttaacaaataaattaatgggaccat
ttcagtctcagtagtaacatgtaagaatgagttttttcatctttcgacaa
gggtattctctaaggtcggcctccagtgaacccttctatccaagtctctc
cag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_89983799_89984957
seq2: B6Ng01-210I16.g_67_1219

seq1  GAATTCCTTGAGCATCAAATTTGGGACCTTTTATTTTTCGGGTAAGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAGCATCAAATTTGGGACCTTTTATTTTTCGGGTAAGGGGG  50

seq1  TTCCTTTATTCCAAACCTTTTACCTAACAGTGGAGAGAATCATTTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTATTCCAAACCTTTTACCTAACAGTGGAGAGAATCATTTCTGTC  100

seq1  TTCTGATTAAATATCTTGAAACTATATGTGATATTTCATTATCTACATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTAAATATCTTGAAACTATATGTGATATTTCATTATCTACATTG  150

seq1  AAGGCAGATGAATTTTCATTCAAATTTGTCTTCTTTTTCTGTCCCTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGATGAATTTTCATTCAAATTTGTCTTCTTTTTCTGTCCCTGCAT  200

seq1  ATATGCCCAAAGTTAAACTTCCTTTTACATTTCTTGGTATTTTACAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCCAAAGTTAAACTTCCTTTTACATTTCTTGGTATTTTACAGTGT  250

seq1  AAGGTCTTTTGGTTTATGATCTGTTATACGGGCCAAAGATTAAGTGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTTTGGTTTATGATCTGTTATACGGGCCAAAGATTAAGTGTCTA  300

seq1  GACTTTTAAATGTAGATACATGCTTATACACAACCCCTGGGAAGTACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTAAATGTAGATACATGCTTATACACAACCCCTGGGAAGTACCTT  350

seq1  ATTTCATATACATATACTGTGTTATTCTTCAATGTACCTTGTTCATTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATATACATATACTGTGTTATTCTTCAATGTACCTTGTTCATTCAA  400

seq1  CAACACATGAAAGCTAACTCAAGAGGGGAGACAAAAATCCCAAACCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACATGAAAGCTAACTCAAGAGGGGAGACAAAAATCCCAAACCAACC  450

seq1  AAAATACTGGCTGAAATAACAGACAAGGCAGGCAGGGGACACTGTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTGGCTGAAATAACAGACAAGGCAGGCAGGGGACACTGTATTGA  500

seq1  ACTTTAAAAATGGTGTTAATATGAGTAGGCAGTGGGAAACCTAGCGACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAAATGGTGTTAATATGAGTAGGCAGTGGGAAACCTAGCGACGG  550

seq1  CTCAGCAGTTCAGAGCACTCACTGGCTGCTCTTTCATTTGCCAGCGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGTTCAGAGCACTCACTGGCTGCTCTTTCATTTGCCAGCGCCAG  600

seq1  AAGACAGTAACAGTACAACCTGTACAGCTATGTTCAACAAAGACTAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTAACAGTACAACCTGTACAGCTATGTTCAACAAAGACTAATAG  650

seq1  GACAAACTTTGTTACATGCAAGCAAGATACCAGGTGTTTATATAGATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACTTTGTTACATGCAAGCAAGATACCAGGTGTTTATATAGATGCC  700

seq1  ACAAACACACAAGGAAGTTAAATAGCCACTTTAAGGGTTGGTTGGTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACACAAGGAAGTTAAATAGCCACTTTAAGGGTTGGTTGGTTGTG  750

seq1  GTTTTTTGTCTCCCAGTAGCATCACTAAAGCCTACAAAACTTTATTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTCTCCCAGTAGCATCACTAAAGCCTACAAAACTTTATTTCTC  800

seq1  CATAAACATGTTCCTTTGTTGCTGTGGCAAATCCAACTGCAAATTTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACATGTTCCTTTGTTGCTGTGGCAAATCCAACTGCAAATTTCAAG  850

seq1  GCATACAGTTCAGAGGGACGGGGAAGCATGGTTCAGCTCATGTT-GGCAG  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCATACAGTTCAGAGGGACGGGGAAGCATGGTTCAGCTCATGTTGGGCAG  900

seq1  GAAATTGTGATGCAACCTACTTACATACATACAGGCAAGTCAAGAAGCAC  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAATTGTGATGCAACCTACTTACATACATACAGGCAAGTC-AGAAGCAC  949

seq1  AGGAGGGATAGTCCATTCAGATGGGCCTACTTCTTCCAGACAGGTCTCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGATAGTCCATTCAGATGGGCCTACTTCTTCCAGACAGGTCTCCT  999

seq1  AAGTGGTGTTACCAGCTAGAGACTCAATGTTTAACAAATAAATTTATGGG  1049
      |||| ||||   ||||||||||||| |||||||||||||||||| || ||
seq2  AAGT-GTGT--ACAGCTAGAGACTC-ATGTTTAACAAATAAATTAAT-GG  1044

seq1  GACCATTTCAGTCTCAAGTAGTAACATGTATAGAATGAGTTTTTTCATCT  1099
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  GACCATTTCAGTCTC-AGTAGTAACATGTA-AGAATGAGTTTTTTCATCT  1092

seq1  TTCGAC-AGGGAATCCTCTATAGGTCGGCCTCCAGTG-ACCCTCCTATCC  1147
      |||||| |||| || ||||| |||||||||||||||| ||||| ||||||
seq2  TTCGACAAGGGTATTCTCTA-AGGTCGGCCTCCAGTGAACCCTTCTATCC  1141

seq1  CAGTCTCCCCAG  1159
       |||||| ||||
seq2  AAGTCTCTCCAG  1153