BAC Information

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BAC

Clone NameB6Ng01-212N12
Chromosome9 (Build37)
Map Location 101,453,596 - 101,454,475
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem22, LOC667486, Stag1, LOC100040990, Pccb, LOC100041013, LOC100040707, Msl2l1, 3222402P14Rik, LOC100041065, EG382099
Downstream geneEphb1, 9630041A04Rik, Ky, LOC664843
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212N12.bB6Ng01-212N12.g
ACCGA030535GA030536
length884368
definitionB6Ng01-212N12.b B6Ng01-212N12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccggaagcagccttatttggctctgagctgagggacagttcagag
gtaccaatgggacagctgtagcctggtgacactctggtccagtggagcct
tggagagtgctagagaaatcttgacctacagatgcacttgaggtggtgtt
gcacggtagggggcagcaactgctttttctcacagaaaaatcctcgaaat
cattcttgctcagaggaggaccacaggggccactgcatcctaggaagcag
cagcagcagcagcagcagcaacagcagcactgctgtggctcaatgtgtaa
ttgtaaggctgcccaagtttgaggtcacctgaagccagagtggccatgct
gagtgtgggaagcctgaggtcttggccttgttttcccattcttcattttt
ctatcttctcccatttccctcctctctatagtgctgatttctaaggaggc
taatgtttttagtgagaagaactatgaacagcaaaagcaaggccagctgc
tcactcagatatggccttctggacaaaggctattggccaagagaatacat
ttgagggtcccagatatccctagagggatgggagagcttctgcccaaacc
aaaacaggtcaggatttctcactgcatcctctggacacaaaaaggagggg
tgggggagaaagagggagagcatccagagctttggtgatgtatggaccac
agagactttccttaggtattttcagtttttatacttgccaaatgaaatcg
atagttctttaactttctttgtttattgtaaatctgcttaaccccacccc
ttgaaatatgatatgtgtccccagaagagtacacagtgctctctctctct
ctctcttcctctctctctctctctctctctatct

tttatataatttgggcaaaaatattttatatggtatttcaattgcacaaa
tatcaattgcatcaaaatccatggatttcttaacataatgcttcaaagaa
atattttttatattaatgaaatccaatttagttttatggttcatgttttt
atactgtaatgtaaccttaggtaatttctctcactatattctaaaaattt
tactgttttctcttttatagttaggtctctggtgcaccttgaattaatgt
ttatatactatatgaattgagggtcaagattcatcgcttgagtatgggcg
tttagttatgccacgatctcctataaaaatttattattttacattgaact
atctgactcctttgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_101453596_101454475
seq2: B6Ng01-212N12.b_49_932

seq1  GAATTCCGGAAGCAGCCTTATTTGGCTCTGAGCTGAGGGACAGTTCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGGAAGCAGCCTTATTTGGCTCTGAGCTGAGGGACAGTTCAGAG  50

seq1  GTACCAATGGGACAGCTGTAGCCTGGTGACACTCTGGTCCAGTGGAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAATGGGACAGCTGTAGCCTGGTGACACTCTGGTCCAGTGGAGCCT  100

seq1  TGGAGAGTGCTAGAGAAATCTTGACCTACAGATGCACTTGAGGTGGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTGCTAGAGAAATCTTGACCTACAGATGCACTTGAGGTGGTGTT  150

seq1  GCACGGTAGGGGGCAGCAACTGCTTTTTCTCACAGAAAAATCCTCGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGTAGGGGGCAGCAACTGCTTTTTCTCACAGAAAAATCCTCGAAAT  200

seq1  CATTCTTGCTCAGAGGAGGACCACAGGGGCCACTGCATCCTAGGAAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTGCTCAGAGGAGGACCACAGGGGCCACTGCATCCTAGGAAGCAG  250

seq1  CAGCAGCAGCAGCAGCAGCAACAGCAGCACTGCTGTGGCTCAATGTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCAGCAGCAGCAGCAACAGCAGCACTGCTGTGGCTCAATGTGTAA  300

seq1  TTGTAAGGCTGCCCAAGTTTGAGGTCACCTGAAGCCAGAGTGGCCATGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGCTGCCCAAGTTTGAGGTCACCTGAAGCCAGAGTGGCCATGCT  350

seq1  GAGTGTGGGAAGCCTGAGGTCTTGGCCTTGTTTTCCCATTCTTCATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGGGAAGCCTGAGGTCTTGGCCTTGTTTTCCCATTCTTCATTTTT  400

seq1  CTATCTTCTCCCATTTCCCTCCTCTCTATAGTGCTGATTTCTAAGGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTCTCCCATTTCCCTCCTCTCTATAGTGCTGATTTCTAAGGAGGC  450

seq1  TAATGTTTTTAGTGAGAAGAACTATGAACAGCAAAAGCAAGGCCAGCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTTTAGTGAGAAGAACTATGAACAGCAAAAGCAAGGCCAGCTGC  500

seq1  TCACTCAGATATGGCCTTCTGGACAAAGGCTATTGGCCAAGAGAATACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGATATGGCCTTCTGGACAAAGGCTATTGGCCAAGAGAATACAT  550

seq1  TTGAGGGTCCCAGATATCCCTAGAGGGATGGGAGAGCTTCTGCCCAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGTCCCAGATATCCCTAGAGGGATGGGAGAGCTTCTGCCCAAACC  600

seq1  AAAACAGGTCAGGATTTCTCACTGCATCCTCTGGACACAAAAAGGAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGTCAGGATTTCTCACTGCATCCTCTGGACACAAAAAGGAGGGG  650

seq1  TGGGGGAGAAAGAGGGAGAGCATCCAGAGCTTTGGTGATGTATGGACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGAAAGAGGGAGAGCATCCAGAGCTTTGGTGATGTATGGACCAC  700

seq1  AGAGACTTTCCTTAGGTATTTTCAGTTTTTATACTTGCCAAATG-AATCG  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGAGACTTTCCTTAGGTATTTTCAGTTTTTATACTTGCCAAATGAAATCG  750

seq1  ATAGTTC-TTAACTTTC-TTGTTTATTGTAAATCTGCTTAACCCCACCCC  797
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  ATAGTTCTTTAACTTTCTTTGTTTATTGTAAATCTGCTTAACCCCACCCC  800

seq1  -TGAAATATGATATGTGTCCCCAGAAGAGTACACAGTGCTCTCTCTCTCT  846
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATGATATGTGTCCCCAGAAGAGTACACAGTGCTCTCTCTCTCT  850

seq1  CTCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCT  880
      |||||||||||||||||||||||||||||| |||
seq2  CTCTCTTCCTCTCTCTCTCTCTCTCTCTCTATCT  884


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